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The map label for this gene is ssuC [H]

Identifier: 13488115

GI number: 13488115

Start: 163352

End: 164233

Strand: Reverse

Name: ssuC [H]

Synonym: mll9180

Alternate gene names: 13488115

Gene position: 164233-163352 (Counterclockwise)

Preceding gene: 13488116

Following gene: 13488114

Centisome position: 46.67

GC content: 62.93

Gene sequence:

>882_bases
ATGAACGCATTCTCCAATACCGCCGCGGTTGCCGCCAACATTGGCTATGCATCTGATGAGAGGGCGTTGATCCCGCCCGC
CGTAAAACCCCGCAAGACTGGGACGAGGCGTCGCCTGGCGCTTGGGCGGCCGATCCCGTTCGGCGCGCTGATCGGGCCCG
CACTTCTTCTCGTGATCTGGTCCCTTGGCAGTGTCGCCGGCCTGATCGATCCAAGGACGCTGCCGGCGCCCTGGTCGGTT
GTCGGCACGGCTATCGATCTCATCGCCGAAGGCAAACTTCAGGATCATCTGATGACGTCTGCCTGGCGGGCGGCACAGGG
GCTGGCGTTCGGTGTCCTGATCGGCACTGTGCTGGCTCTCATTTCAGGGTTGTCGCGGCTTGGCGAGGCGATCATCGACG
GCCCCGTTCAGATCAAGCGGGCGATCCCGACGCTGGCCCTGATCCCGCTGCTGATGCTGTGGTTCGGCATTGGCGAGGGC
ATGAAGGTGACGGCCATCGCGCTGGCTGTGCTGATCCCGATCTATATCCAGACCCATAGCAGCTTGCGCAGCATCGACAG
CCGTTATGTCGAACTGGCCCAGACCTTGCGGATGGGATACGGCGAATTCATCCGCGAGGTCATCCTGCCGGGCGCCCTTC
CCGGCTTCTTCCTTGGCCTGCGTTTGGCGGTGACCTATGCCTGGCTGTCTCTGGTGGTGGTCGAACAGGTCAATGCCACC
AGCGGCATCGGCTACATGATCGATCTCGCGCGCAATTACGGCCAGACCGACATCGTCATCGTCGGTCTCGCCGTCTACGC
ATTGCTCGGGCTCGGCTGCGACGGCATCGTCCGCGTCTTTCAGGAAAGGTCGCTGGCATGGCGTCGCACCTTGGCGGATT
GA

Upstream 100 bases:

>100_bases
ATCAAGGCCCAGGATCTTTTCGACAGACGTTTCGAGACGATCGCCGCAAGCGCGCTGAACGCGTCCTGACTCCTGCTTCC
CCAAACTGGAGACGACGCAG

Downstream 100 bases:

>100_bases
GGGACGCGCCGGTGGTGCGGGTCGAAAGCCTTGTGAGGAGTTTCGGGCCACGAACCATCCTCGACGGCCTCAGCCTCGAC
ATCGAGAAGGGAGAATTCGT

Product: permease of ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MNAFSNTAAVAANIGYASDERALIPPAVKPRKTGTRRRLALGRPIPFGALIGPALLLVIWSLGSVAGLIDPRTLPAPWSV
VGTAIDLIAEGKLQDHLMTSAWRAAQGLAFGVLIGTVLALISGLSRLGEAIIDGPVQIKRAIPTLALIPLLMLWFGIGEG
MKVTAIALAVLIPIYIQTHSSLRSIDSRYVELAQTLRMGYGEFIREVILPGALPGFFLGLRLAVTYAWLSLVVVEQVNAT
SGIGYMIDLARNYGQTDIVIVGLAVYALLGLGCDGIVRVFQERSLAWRRTLAD

Sequences:

>Translated_293_residues
MNAFSNTAAVAANIGYASDERALIPPAVKPRKTGTRRRLALGRPIPFGALIGPALLLVIWSLGSVAGLIDPRTLPAPWSV
VGTAIDLIAEGKLQDHLMTSAWRAAQGLAFGVLIGTVLALISGLSRLGEAIIDGPVQIKRAIPTLALIPLLMLWFGIGEG
MKVTAIALAVLIPIYIQTHSSLRSIDSRYVELAQTLRMGYGEFIREVILPGALPGFFLGLRLAVTYAWLSLVVVEQVNAT
SGIGYMIDLARNYGQTDIVIVGLAVYALLGLGCDGIVRVFQERSLAWRRTLAD
>Mature_293_residues
MNAFSNTAAVAANIGYASDERALIPPAVKPRKTGTRRRLALGRPIPFGALIGPALLLVIWSLGSVAGLIDPRTLPAPWSV
VGTAIDLIAEGKLQDHLMTSAWRAAQGLAFGVLIGTVLALISGLSRLGEAIIDGPVQIKRAIPTLALIPLLMLWFGIGEG
MKVTAIALAVLIPIYIQTHSSLRSIDSRYVELAQTLRMGYGEFIREVILPGALPGFFLGLRLAVTYAWLSLVVVEQVNAT
SGIGYMIDLARNYGQTDIVIVGLAVYALLGLGCDGIVRVFQERSLAWRRTLAD

Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=236, Percent_Identity=43.2203389830509, Blast_Score=165, Evalue=3e-42,
Organism=Escherichia coli, GI1786564, Length=240, Percent_Identity=32.5, Blast_Score=112, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31321; Mature: 31321

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAFSNTAAVAANIGYASDERALIPPAVKPRKTGTRRRLALGRPIPFGALIGPALLLVIW
CCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHH
SLGSVAGLIDPRTLPAPWSVVGTAIDLIAEGKLQDHLMTSAWRAAQGLAFGVLIGTVLAL
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISGLSRLGEAIIDGPVQIKRAIPTLALIPLLMLWFGIGEGMKVTAIALAVLIPIYIQTHS
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
SLRSIDSRYVELAQTLRMGYGEFIREVILPGALPGFFLGLRLAVTYAWLSLVVVEQVNAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
SGIGYMIDLARNYGQTDIVIVGLAVYALLGLGCDGIVRVFQERSLAWRRTLAD
CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNAFSNTAAVAANIGYASDERALIPPAVKPRKTGTRRRLALGRPIPFGALIGPALLLVIW
CCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHH
SLGSVAGLIDPRTLPAPWSVVGTAIDLIAEGKLQDHLMTSAWRAAQGLAFGVLIGTVLAL
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISGLSRLGEAIIDGPVQIKRAIPTLALIPLLMLWFGIGEGMKVTAIALAVLIPIYIQTHS
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
SLRSIDSRYVELAQTLRMGYGEFIREVILPGALPGFFLGLRLAVTYAWLSLVVVEQVNAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
SGIGYMIDLARNYGQTDIVIVGLAVYALLGLGCDGIVRVFQERSLAWRRTLAD
CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8011666; 9782504; 9384377 [H]