| Definition | Mesorhizobium loti MAFF303099 plasmid pMLa, complete sequence. |
|---|---|
| Accession | NC_002679 |
| Length | 351,911 |
Click here to switch to the map view.
The map label for this gene is 13488102
Identifier: 13488102
GI number: 13488102
Start: 141892
End: 142752
Strand: Reverse
Name: 13488102
Synonym: mll9162
Alternate gene names: NA
Gene position: 142752-141892 (Counterclockwise)
Preceding gene: 13488103
Following gene: 13488101
Centisome position: 40.56
GC content: 63.65
Gene sequence:
>861_bases ATGCGACTGACCAAGAACCGACAAGCCAGGCTTCTTTTCAGCGTCGCCTTTGCCGCCGCTGCTCTTTGGCCTGGAATCCG GACAGCGGGCGCGCAGTCGACCGACGTCTTCTTCGACTATCCGCAGACCATGCTGAACGGACCCGTCAGCGCGACGGTCA CCATCCCTGTCCTCGAGTCCTGTCGGAGGCTCTGCTCCACGCGTTCCGGATGCATCGGCTTTGACTATTCGTCGCCCGGG GGCCTCTGCAGGCTCTTCTCGGCCGTCGTCGGCGCGAGAGACAGCCAAGATCACACGGCGGGCGCCCGCAGCCTGATCCC AGGCTACCGTCCACCGACCAACCCGCCTGCGCCGCCCGTACCGGTGCCCGAGGTGGTCGCCGTTCAAGCGCCCCCAGTCA GTTTCTCGCGTTTCCTCAACAGGGACCTCACGGGCGGTTCGATCGCCTCCATGGCAGCACAGGACGCCGATCAGTGCGAA GCGATTTGTCGAACTACGGGTCCCTCCTGCCGGGCCTACACTTATGACGCCTGGAACAGGAAGTGCTTCCTGAAAGGCGA GACTGGCCAGCTCCTGATGAACGCCCGCGCCACCAGCGGAGTCGTTTCAGACCTTGGCGCGCCGAGCTCGTCGGGCGCGC CCGTGCACATGGAATACTTCAACAGCAAGGCCTTTTCCGGAAACGGCTTCCGTGTCCTGGCGTCACCGAACCGGGACGCT TGCGCAAACGAATGCTGGAACGTCGAACAGTGCGTGGCGTTCGGATTTACCGTTTCGCAAAGGCGTTGCGTCCTCTTCGA CCAGCCGGGCGAATATTTCAGCAGCCGGGGCACCGACAGCGGCGCGAAACGCCAGAACTGA
Upstream 100 bases:
>100_bases TGCGACTGGTCGCCCGATGGAGATGGAAAGCCCTGTTCTGCGTAGGGCTGACACTTCTGCTTGTGGTCCTCCTGGCAACT CGGCGATAAAGGCAACTTGA
Downstream 100 bases:
>100_bases GTTATTCCATAAGGATAGGCTAGAACTCCGTGAAACAGCTTCCTGTCTGGTTGCAGCCGGCTTGAGTCACCCCCTGGACG GTCTGGTAACAGCTGCAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MRLTKNRQARLLFSVAFAAAALWPGIRTAGAQSTDVFFDYPQTMLNGPVSATVTIPVLESCRRLCSTRSGCIGFDYSSPG GLCRLFSAVVGARDSQDHTAGARSLIPGYRPPTNPPAPPVPVPEVVAVQAPPVSFSRFLNRDLTGGSIASMAAQDADQCE AICRTTGPSCRAYTYDAWNRKCFLKGETGQLLMNARATSGVVSDLGAPSSSGAPVHMEYFNSKAFSGNGFRVLASPNRDA CANECWNVEQCVAFGFTVSQRRCVLFDQPGEYFSSRGTDSGAKRQN
Sequences:
>Translated_286_residues MRLTKNRQARLLFSVAFAAAALWPGIRTAGAQSTDVFFDYPQTMLNGPVSATVTIPVLESCRRLCSTRSGCIGFDYSSPG GLCRLFSAVVGARDSQDHTAGARSLIPGYRPPTNPPAPPVPVPEVVAVQAPPVSFSRFLNRDLTGGSIASMAAQDADQCE AICRTTGPSCRAYTYDAWNRKCFLKGETGQLLMNARATSGVVSDLGAPSSSGAPVHMEYFNSKAFSGNGFRVLASPNRDA CANECWNVEQCVAFGFTVSQRRCVLFDQPGEYFSSRGTDSGAKRQN >Mature_286_residues MRLTKNRQARLLFSVAFAAAALWPGIRTAGAQSTDVFFDYPQTMLNGPVSATVTIPVLESCRRLCSTRSGCIGFDYSSPG GLCRLFSAVVGARDSQDHTAGARSLIPGYRPPTNPPAPPVPVPEVVAVQAPPVSFSRFLNRDLTGGSIASMAAQDADQCE AICRTTGPSCRAYTYDAWNRKCFLKGETGQLLMNARATSGVVSDLGAPSSSGAPVHMEYFNSKAFSGNGFRVLASPNRDA CANECWNVEQCVAFGFTVSQRRCVLFDQPGEYFSSRGTDSGAKRQN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30620; Mature: 30620
Theoretical pI: Translated: 8.55; Mature: 8.55
Prosite motif: PS50948 PAN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLTKNRQARLLFSVAFAAAALWPGIRTAGAQSTDVFFDYPQTMLNGPVSATVTIPVLES CCCCCCCHHHHHHHHHHHHHHHCCCHHCCCCCCCCEEEECCHHHHCCCCEEEEEHHHHHH CRRLCSTRSGCIGFDYSSPGGLCRLFSAVVGARDSQDHTAGARSLIPGYRPPTNPPAPPV HHHHHCCCCCCEECCCCCCCHHHHHHHHHHCCCCCCCHHCCHHHHCCCCCCCCCCCCCCC PVPEVVAVQAPPVSFSRFLNRDLTGGSIASMAAQDADQCEAICRTTGPSCRAYTYDAWNR CCCCEEEECCCCCHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHCCCCCCEEEEECCCCC KCFLKGETGQLLMNARATSGVVSDLGAPSSSGAPVHMEYFNSKAFSGNGFRVLASPNRDA EEEEECCCCEEEEECCHHHHHHHHCCCCCCCCCEEEEEECCCCEECCCCEEEEECCCCCH CANECWNVEQCVAFGFTVSQRRCVLFDQPGEYFSSRGTDSGAKRQN HHHHCCCHHHHHHHCCEECCCEEEEECCCCHHHHCCCCCCCCCCCC >Mature Secondary Structure MRLTKNRQARLLFSVAFAAAALWPGIRTAGAQSTDVFFDYPQTMLNGPVSATVTIPVLES CCCCCCCHHHHHHHHHHHHHHHCCCHHCCCCCCCCEEEECCHHHHCCCCEEEEEHHHHHH CRRLCSTRSGCIGFDYSSPGGLCRLFSAVVGARDSQDHTAGARSLIPGYRPPTNPPAPPV HHHHHCCCCCCEECCCCCCCHHHHHHHHHHCCCCCCCHHCCHHHHCCCCCCCCCCCCCCC PVPEVVAVQAPPVSFSRFLNRDLTGGSIASMAAQDADQCEAICRTTGPSCRAYTYDAWNR CCCCEEEECCCCCHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHCCCCCCEEEEECCCCC KCFLKGETGQLLMNARATSGVVSDLGAPSSSGAPVHMEYFNSKAFSGNGFRVLASPNRDA EEEEECCCCEEEEECCHHHHHHHHCCCCCCCCCEEEEEECCCCEECCCCEEEEECCCCCH CANECWNVEQCVAFGFTVSQRRCVLFDQPGEYFSSRGTDSGAKRQN HHHHCCCHHHHHHHCCEECCCEEEEECCCCHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA