| Definition | Mesorhizobium loti MAFF303099 plasmid pMLa, complete sequence. |
|---|---|
| Accession | NC_002679 |
| Length | 351,911 |
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The map label for this gene is ecaIM [H]
Identifier: 13488060
GI number: 13488060
Start: 55097
End: 56941
Strand: Reverse
Name: ecaIM [H]
Synonym: mll9056
Alternate gene names: 13488060
Gene position: 56941-55097 (Counterclockwise)
Preceding gene: 13488324
Following gene: 13488059
Centisome position: 16.18
GC content: 55.28
Gene sequence:
>1845_bases ATGAGCCGTGCACGCATTGCGGCGGGAGCGGCCGACCAGGGCGGCAGGTGGCCCGGGCAATGGTTAACCGCTTATCAGCG AAGTTCCTGCAAAGTATCATTCGCAGCAGTGGGGCCCGAGATGAAAAATCAGCTTTGGTTCGGAGATAATTTGACGATTC TCCGGGAAGAAATTGCAGACGAAAGCGTGGATCTCGTCTATCTCGATCCGCCGTTTAACAGCCAAGTCAACTACAACGTC CTCTTTCGAACTCCCGATGAAGATGCCGCCAGCGCTCAAGTAGAGGCATTCCGAGATACGTGGACTTGGGGGCCAGAGGC CAAGTGGGCTTTCGATGAGATTATGCATACTGGCGGTGGTGTCACGCCGATTGTGCATGCTCTGCATGCAGCGCTCGGTG ACAGCGATATGATGGCCTATTTGGTCATGATGGCGCAACGGTTGCACGAGTTACGACGCGTTCTAAGGCCAACAGGAAGC CTTTATTTGCATTGCGATCCAACGGCGAGCCATTACCTCAAGATCATTCTCGACGCGATTTTCGGCCCGACGAATTTTCT GAACGAGGTAATCTGGAAAAGAACTAGCGCACATAGTAGCGCACGACGTTACGGGCCAATCCATGACGTTTTGCTGTTCT ATTCGCGTGGTGAACGGCATTGCTGGAATGCTCAGTATCAGCCTTACGACGCAGAATATTTGGACACTTTTTTTGATCAG GAGGACGCTGACGGCCGGCGTTGGAAGCGCACTGATCTTACCGGTGCGGGAAAGAGGAATGGCGAAACTGGTAAACCTTG GCGCGGCATCGACATTACGGCCAAGGGAAGGCATTGGTCGACGTCGCCTGACCAACTTGACGCCCTTGATCTTGCTGGGA AGGTTCATTGGCCGAAGAAGGCGGGGGGTATGCCGCGACTCCGGCAGTATCCCGAGGATCTGCCTGGTGTCGCGCTTCAG GACATTTGGACGGACATCAAACCGCTGCATAATCGAGCGGCGGAACGATTGCACTACCCCACTCAGAAACCTGTGTCGCT GTTAGATAGAATACTCCGGTCTTCCGCCAATGTGGGCGAGGTGGTGCTGGATCCATTCTGCGGCTGCGGAACGACCATTG CTGCTGCCCAGTTGGCCGGTCGTCAATGGATCGGTATTGATGTGGCGTATCATGCCATCCGTGTGATCGAAGACCGCTTG GCCGATATGCCTGGTAAGATTGACTATGATCTTGGCGGCATCCCCCGCGACTTCGCCAGTGCTGCCCGTCTCGCCGAGCG GGACAAATACCAATTTCAATGGTGGGCCAACTACCTGGTTGGCGTCCAAGCGCTAAAGGAAATTCGAAAAGGCCCGGACC GTGGTATCGACGGTCAAATGTATTTCATGAACGGGCCGCGCGGCTGGGGGCGTGTGCTGACATCCGTTAAAGGCGGTCAG CATATCGGCACCAAAGATGTGCGTGAGTTCAAAGCTGTGATCGATCGTGAACGCGCGGAAATGGGCTTATTCATCTGCCT CCGAGAACCCACGCGCGACATGCGTTCGGAAGCCGCGTCCTTCGGCTTTGTCGATACTGCCCACGGTCACCTGCCCAGAT TGCAGATCGTTTCAATCGAGCGCTGGTTCAATGGGGAGCGCCCAACTATCCCTTCGCTTGGGCATCTCTCACGGGAATTT TTCCGCCAATCTTCCAAACCTGAAAAGAGCAAGAAACCGAGGCGTCCGGACCCAACCGCACCTGAGTTCCCATTCAGCTT TATCGGCGACGGAAAGGACGCGGTTGTGCATTTCAACCCGACCGCAGTCCCCAAGGAACATGGGCTTTCTGAAGGGTTGC TGTAG
Upstream 100 bases:
>100_bases CGCTCGCAAGAAACGCTATCATTTTCATTGATTTCCCCCCGGAAAAATACTTGCGCAAATTCTGTACGGAAGTCCAGAGG CTTGTTGAGTCCGCGTATCG
Downstream 100 bases:
>100_bases ACAGTCGAGATCAAAATGGGTTTGGCCGGTCCTCGAGGTTTCAGCACGAACTTTCACACGGTCTTCCGTCCTTGTCGCGG TTGAGCTTGCCGCCCCAGGG
Product: DNA methyltransferase
Products: NA
Alternate protein names: M.EcaI; Adenine-specific methyltransferase EcaI [H]
Number of amino acids: Translated: 614; Mature: 613
Protein sequence:
>614_residues MSRARIAAGAADQGGRWPGQWLTAYQRSSCKVSFAAVGPEMKNQLWFGDNLTILREEIADESVDLVYLDPPFNSQVNYNV LFRTPDEDAASAQVEAFRDTWTWGPEAKWAFDEIMHTGGGVTPIVHALHAALGDSDMMAYLVMMAQRLHELRRVLRPTGS LYLHCDPTASHYLKIILDAIFGPTNFLNEVIWKRTSAHSSARRYGPIHDVLLFYSRGERHCWNAQYQPYDAEYLDTFFDQ EDADGRRWKRTDLTGAGKRNGETGKPWRGIDITAKGRHWSTSPDQLDALDLAGKVHWPKKAGGMPRLRQYPEDLPGVALQ DIWTDIKPLHNRAAERLHYPTQKPVSLLDRILRSSANVGEVVLDPFCGCGTTIAAAQLAGRQWIGIDVAYHAIRVIEDRL ADMPGKIDYDLGGIPRDFASAARLAERDKYQFQWWANYLVGVQALKEIRKGPDRGIDGQMYFMNGPRGWGRVLTSVKGGQ HIGTKDVREFKAVIDRERAEMGLFICLREPTRDMRSEAASFGFVDTAHGHLPRLQIVSIERWFNGERPTIPSLGHLSREF FRQSSKPEKSKKPRRPDPTAPEFPFSFIGDGKDAVVHFNPTAVPKEHGLSEGLL
Sequences:
>Translated_614_residues MSRARIAAGAADQGGRWPGQWLTAYQRSSCKVSFAAVGPEMKNQLWFGDNLTILREEIADESVDLVYLDPPFNSQVNYNV LFRTPDEDAASAQVEAFRDTWTWGPEAKWAFDEIMHTGGGVTPIVHALHAALGDSDMMAYLVMMAQRLHELRRVLRPTGS LYLHCDPTASHYLKIILDAIFGPTNFLNEVIWKRTSAHSSARRYGPIHDVLLFYSRGERHCWNAQYQPYDAEYLDTFFDQ EDADGRRWKRTDLTGAGKRNGETGKPWRGIDITAKGRHWSTSPDQLDALDLAGKVHWPKKAGGMPRLRQYPEDLPGVALQ DIWTDIKPLHNRAAERLHYPTQKPVSLLDRILRSSANVGEVVLDPFCGCGTTIAAAQLAGRQWIGIDVAYHAIRVIEDRL ADMPGKIDYDLGGIPRDFASAARLAERDKYQFQWWANYLVGVQALKEIRKGPDRGIDGQMYFMNGPRGWGRVLTSVKGGQ HIGTKDVREFKAVIDRERAEMGLFICLREPTRDMRSEAASFGFVDTAHGHLPRLQIVSIERWFNGERPTIPSLGHLSREF FRQSSKPEKSKKPRRPDPTAPEFPFSFIGDGKDAVVHFNPTAVPKEHGLSEGLL >Mature_613_residues SRARIAAGAADQGGRWPGQWLTAYQRSSCKVSFAAVGPEMKNQLWFGDNLTILREEIADESVDLVYLDPPFNSQVNYNVL FRTPDEDAASAQVEAFRDTWTWGPEAKWAFDEIMHTGGGVTPIVHALHAALGDSDMMAYLVMMAQRLHELRRVLRPTGSL YLHCDPTASHYLKIILDAIFGPTNFLNEVIWKRTSAHSSARRYGPIHDVLLFYSRGERHCWNAQYQPYDAEYLDTFFDQE DADGRRWKRTDLTGAGKRNGETGKPWRGIDITAKGRHWSTSPDQLDALDLAGKVHWPKKAGGMPRLRQYPEDLPGVALQD IWTDIKPLHNRAAERLHYPTQKPVSLLDRILRSSANVGEVVLDPFCGCGTTIAAAQLAGRQWIGIDVAYHAIRVIEDRLA DMPGKIDYDLGGIPRDFASAARLAERDKYQFQWWANYLVGVQALKEIRKGPDRGIDGQMYFMNGPRGWGRVLTSVKGGQH IGTKDVREFKAVIDRERAEMGLFICLREPTRDMRSEAASFGFVDTAHGHLPRLQIVSIERWFNGERPTIPSLGHLSREFF RQSSKPEKSKKPRRPDPTAPEFPFSFIGDGKDAVVHFNPTAVPKEHGLSEGLL
Specific function: This methylase recognizes the double-stranded sequence GGTNACC, causes specific methylation on A-5 on both strands and protects the DNA from cleavage by the EcaI endonuclease [H]
COG id: COG2189
COG function: function code L; Adenine specific DNA methylase Mod
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002295 - InterPro: IPR002941 - InterPro: IPR002052 [H]
Pfam domain/function: PF01555 N6_N4_Mtase [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 69231; Mature: 69100
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRARIAAGAADQGGRWPGQWLTAYQRSSCKVSFAAVGPEMKNQLWFGDNLTILREEIAD CCCCCEECCCCCCCCCCCHHHHHHHHCCCCEEEEEECCHHHHCCEEECCCHHHHHHHHCC ESVDLVYLDPPFNSQVNYNVLFRTPDEDAASAQVEAFRDTWTWGPEAKWAFDEIMHTGGG CCCCEEEECCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCC VTPIVHALHAALGDSDMMAYLVMMAQRLHELRRVLRPTGSLYLHCDPTASHYLKIILDAI HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHH FGPTNFLNEVIWKRTSAHSSARRYGPIHDVLLFYSRGERHCWNAQYQPYDAEYLDTFFDQ CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCC EDADGRRWKRTDLTGAGKRNGETGKPWRGIDITAKGRHWSTSPDQLDALDLAGKVHWPKK CCCCCCCEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHCCCCCCCHH AGGMPRLRQYPEDLPGVALQDIWTDIKPLHNRAAERLHYPTQKPVSLLDRILRSSANVGE CCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCH VVLDPFCGCGTTIAAAQLAGRQWIGIDVAYHAIRVIEDRLADMPGKIDYDLGGIPRDFAS HHHCCCCCCCHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH AARLAERDKYQFQWWANYLVGVQALKEIRKGPDRGIDGQMYFMNGPRGWGRVLTSVKGGQ HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHCCCCC HIGTKDVREFKAVIDRERAEMGLFICLREPTRDMRSEAASFGFVDTAHGHLPRLQIVSIE CCCHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHCCCEECCCCCCCCEEEEEEH RWFNGERPTIPSLGHLSREFFRQSSKPEKSKKPRRPDPTAPEFPFSFIGDGKDAVVHFNP HHCCCCCCCCCCHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCHHCCCCCCEEEEECC TAVPKEHGLSEGLL CCCCHHCCCCCCCC >Mature Secondary Structure SRARIAAGAADQGGRWPGQWLTAYQRSSCKVSFAAVGPEMKNQLWFGDNLTILREEIAD CCCCEECCCCCCCCCCCHHHHHHHHCCCCEEEEEECCHHHHCCEEECCCHHHHHHHHCC ESVDLVYLDPPFNSQVNYNVLFRTPDEDAASAQVEAFRDTWTWGPEAKWAFDEIMHTGGG CCCCEEEECCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCC VTPIVHALHAALGDSDMMAYLVMMAQRLHELRRVLRPTGSLYLHCDPTASHYLKIILDAI HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHH FGPTNFLNEVIWKRTSAHSSARRYGPIHDVLLFYSRGERHCWNAQYQPYDAEYLDTFFDQ CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCC EDADGRRWKRTDLTGAGKRNGETGKPWRGIDITAKGRHWSTSPDQLDALDLAGKVHWPKK CCCCCCCEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHCCCCCCCHH AGGMPRLRQYPEDLPGVALQDIWTDIKPLHNRAAERLHYPTQKPVSLLDRILRSSANVGE CCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCH VVLDPFCGCGTTIAAAQLAGRQWIGIDVAYHAIRVIEDRLADMPGKIDYDLGGIPRDFAS HHHCCCCCCCHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH AARLAERDKYQFQWWANYLVGVQALKEIRKGPDRGIDGQMYFMNGPRGWGRVLTSVKGGQ HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHCCCCC HIGTKDVREFKAVIDRERAEMGLFICLREPTRDMRSEAASFGFVDTAHGHLPRLQIVSIE CCCHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHCCCEECCCCCCCCEEEEEEH RWFNGERPTIPSLGHLSREFFRQSSKPEKSKKPRRPDPTAPEFPFSFIGDGKDAVVHFNP HHCCCCCCCCCCHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCHHCCCCCCEEEEECC TAVPKEHGLSEGLL CCCCHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2183182 [H]