The gene/protein map for NC_002678 is currently unavailable.
Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is yhxC [H]

Identifier: 229259631

GI number: 229259631

Start: 5645346

End: 5646311

Strand: Reverse

Name: yhxC [H]

Synonym: mll6858

Alternate gene names: 229259631

Gene position: 5646311-5645346 (Counterclockwise)

Preceding gene: 13475717

Following gene: 13475715

Centisome position: 80.25

GC content: 61.08

Gene sequence:

>966_bases
ATGCAGAGCAAGACAACCAGCGAAGCCGCCAAGCACCGTCGCATCCAGCGTGGCATCGATGCCAGGGACAAATCGAAAGG
CAACGGCAAGGGCCAGCACGCCATGCAGGCCGGCGCCCGAAAATATCCGGAGCCACCCTTTCCCGAGCAACATCATCCCA
AGCCGGGGGATGAATGGGCGATCGACCCGGCGCCGCTCTACGATGCGCCCTTCTATCTCGGATCGAAAAAACTCGAAGAC
AAAGTCGCTCTCATCACCGGCGGCGATTCCGGCATCGGCCGTTCGGTGGCGGTTCTGTTCGCCCGCGAGGGAGCTGACAT
TGCGATTGTCTATCTGGCCGAGGACAGGGATGCCAAGGCGACAAAATCCGCCGTCGAAGCGGAAGGACGGCGCTGTATCC
TGGTGAAGGCAGACGTCAGCGAACGCGACCAATGCCGCAACGCGGTGGCGCAAACGGTCAAGGCATTCGGCCGCATCGAC
GTGCTGGTCAACAATGCGGCATTCCAGATTCATTCAAGCGAGTTCGCCGAACTGACCGAAGAGCATTTCGACACGACGCT
GAAGACCAACCTCTACGGCTATTTCCATATGGCACAGGAAGCCGTGCCGCATATGAAGCCGGGCTCGGCCATCATCAACA
CAGGTTCGGTCACCGGCATAGACGGGTCGAAGGCGCTGGTCGACTACTCCATGACCAAGGGAGGCATCCATGCCTTCACC
CGCGCCCTCTCCGGCAATCTTCTCGGCAAGGGCATCCGGGTGAACGCGGTTGCACCGGGTCCGGTATGGACCCCGCTCAA
CCCTTCGGACAAGGAAGCCGGTGACGTTTCGAAGTTCGGCGCGGATACACCGATGAAGCGGCCGGCGCAGCCGGAAGAAC
TCGCACCGGCCTATGTGTTTCTCGCCTCGCCGCATTGCTCGAGCTACATCACCGGCGAGATATTGCCCGTGGTCGGCGGC
TACTGA

Upstream 100 bases:

>100_bases
AGCTACCGTCGCGTGGCATGACGCTGGCGGCAAGATCGTCTTTTGCGCAAACCTTTTCGTCCGACGCGCGTTGTTCTTCC
TCGAAGCCGAGGAGACAGCC

Downstream 100 bases:

>100_bases
GGTCCGTGCAATGTATTTCATCGCATTGGCGACGGACTACGACGGCACGCTTGCGCATGACGGGATCGTCTCGAAGAAGA
CTCTTGCCGCGCTGGAGCGG

Product: short chain dehydrogenase

Products: NA

Alternate protein names: ORFX [H]

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MQSKTTSEAAKHRRIQRGIDARDKSKGNGKGQHAMQAGARKYPEPPFPEQHHPKPGDEWAIDPAPLYDAPFYLGSKKLED
KVALITGGDSGIGRSVAVLFAREGADIAIVYLAEDRDAKATKSAVEAEGRRCILVKADVSERDQCRNAVAQTVKAFGRID
VLVNNAAFQIHSSEFAELTEEHFDTTLKTNLYGYFHMAQEAVPHMKPGSAIINTGSVTGIDGSKALVDYSMTKGGIHAFT
RALSGNLLGKGIRVNAVAPGPVWTPLNPSDKEAGDVSKFGADTPMKRPAQPEELAPAYVFLASPHCSSYITGEILPVVGG
Y

Sequences:

>Translated_321_residues
MQSKTTSEAAKHRRIQRGIDARDKSKGNGKGQHAMQAGARKYPEPPFPEQHHPKPGDEWAIDPAPLYDAPFYLGSKKLED
KVALITGGDSGIGRSVAVLFAREGADIAIVYLAEDRDAKATKSAVEAEGRRCILVKADVSERDQCRNAVAQTVKAFGRID
VLVNNAAFQIHSSEFAELTEEHFDTTLKTNLYGYFHMAQEAVPHMKPGSAIINTGSVTGIDGSKALVDYSMTKGGIHAFT
RALSGNLLGKGIRVNAVAPGPVWTPLNPSDKEAGDVSKFGADTPMKRPAQPEELAPAYVFLASPHCSSYITGEILPVVGG
Y
>Mature_321_residues
MQSKTTSEAAKHRRIQRGIDARDKSKGNGKGQHAMQAGARKYPEPPFPEQHHPKPGDEWAIDPAPLYDAPFYLGSKKLED
KVALITGGDSGIGRSVAVLFAREGADIAIVYLAEDRDAKATKSAVEAEGRRCILVKADVSERDQCRNAVAQTVKAFGRID
VLVNNAAFQIHSSEFAELTEEHFDTTLKTNLYGYFHMAQEAVPHMKPGSAIINTGSVTGIDGSKALVDYSMTKGGIHAFT
RALSGNLLGKGIRVNAVAPGPVWTPLNPSDKEAGDVSKFGADTPMKRPAQPEELAPAYVFLASPHCSSYITGEILPVVGG
Y

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI40254992, Length=244, Percent_Identity=34.4262295081967, Blast_Score=118, Evalue=6e-27,
Organism=Homo sapiens, GI10190704, Length=247, Percent_Identity=33.1983805668016, Blast_Score=109, Evalue=3e-24,
Organism=Homo sapiens, GI59889578, Length=228, Percent_Identity=32.0175438596491, Blast_Score=108, Evalue=5e-24,
Organism=Homo sapiens, GI32483357, Length=248, Percent_Identity=30.6451612903226, Blast_Score=99, Evalue=8e-21,
Organism=Homo sapiens, GI19923817, Length=262, Percent_Identity=29.0076335877863, Blast_Score=98, Evalue=1e-20,
Organism=Homo sapiens, GI15277342, Length=259, Percent_Identity=31.2741312741313, Blast_Score=98, Evalue=1e-20,
Organism=Homo sapiens, GI31542939, Length=211, Percent_Identity=31.2796208530806, Blast_Score=93, Evalue=3e-19,
Organism=Homo sapiens, GI4758504, Length=212, Percent_Identity=32.0754716981132, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI4504505, Length=255, Percent_Identity=27.4509803921569, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI66933014, Length=254, Percent_Identity=29.9212598425197, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI5031737, Length=248, Percent_Identity=29.4354838709677, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI224922801, Length=172, Percent_Identity=30.8139534883721, Blast_Score=72, Evalue=9e-13,
Organism=Homo sapiens, GI83715985, Length=187, Percent_Identity=29.9465240641711, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI126723750, Length=251, Percent_Identity=26.6932270916335, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI210032110, Length=203, Percent_Identity=27.0935960591133, Blast_Score=70, Evalue=4e-12,
Organism=Homo sapiens, GI7705925, Length=250, Percent_Identity=29.2, Blast_Score=68, Evalue=9e-12,
Organism=Homo sapiens, GI126723191, Length=186, Percent_Identity=28.494623655914, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI40807363, Length=198, Percent_Identity=27.7777777777778, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI33667109, Length=192, Percent_Identity=30.2083333333333, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI1789378, Length=276, Percent_Identity=43.4782608695652, Blast_Score=229, Evalue=1e-61,
Organism=Escherichia coli, GI2367175, Length=252, Percent_Identity=36.1111111111111, Blast_Score=144, Evalue=9e-36,
Organism=Escherichia coli, GI87082100, Length=247, Percent_Identity=33.1983805668016, Blast_Score=114, Evalue=9e-27,
Organism=Escherichia coli, GI1789208, Length=258, Percent_Identity=31.3953488372093, Blast_Score=113, Evalue=1e-26,
Organism=Escherichia coli, GI1787335, Length=250, Percent_Identity=31.6, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1788459, Length=248, Percent_Identity=33.0645161290323, Blast_Score=107, Evalue=8e-25,
Organism=Escherichia coli, GI87082160, Length=254, Percent_Identity=30.3149606299213, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1787905, Length=252, Percent_Identity=27.7777777777778, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI2367365, Length=245, Percent_Identity=31.0204081632653, Blast_Score=98, Evalue=9e-22,
Organism=Escherichia coli, GI1790717, Length=246, Percent_Identity=30.4878048780488, Blast_Score=95, Evalue=7e-21,
Organism=Escherichia coli, GI1789057, Length=256, Percent_Identity=28.125, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1787545, Length=254, Percent_Identity=25.5905511811024, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1787820, Length=243, Percent_Identity=24.2798353909465, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1786812, Length=252, Percent_Identity=25.7936507936508, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1787526, Length=228, Percent_Identity=21.9298245614035, Blast_Score=62, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17551412, Length=261, Percent_Identity=33.3333333333333, Blast_Score=125, Evalue=4e-29,
Organism=Caenorhabditis elegans, GI17559104, Length=260, Percent_Identity=34.2307692307692, Blast_Score=120, Evalue=6e-28,
Organism=Caenorhabditis elegans, GI193204405, Length=264, Percent_Identity=33.3333333333333, Blast_Score=115, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI25147288, Length=251, Percent_Identity=31.4741035856574, Blast_Score=115, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI17531453, Length=262, Percent_Identity=33.206106870229, Blast_Score=114, Evalue=5e-26,
Organism=Caenorhabditis elegans, GI17560150, Length=259, Percent_Identity=32.8185328185328, Blast_Score=114, Evalue=6e-26,
Organism=Caenorhabditis elegans, GI17562904, Length=260, Percent_Identity=31.9230769230769, Blast_Score=113, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17538480, Length=260, Percent_Identity=31.1538461538462, Blast_Score=112, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17562990, Length=259, Percent_Identity=32.8185328185328, Blast_Score=110, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17560332, Length=261, Percent_Identity=31.4176245210728, Blast_Score=108, Evalue=5e-24,
Organism=Caenorhabditis elegans, GI17562910, Length=262, Percent_Identity=30.9160305343511, Blast_Score=107, Evalue=7e-24,
Organism=Caenorhabditis elegans, GI17562906, Length=260, Percent_Identity=28.8461538461538, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17560220, Length=260, Percent_Identity=30.7692307692308, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17560676, Length=251, Percent_Identity=28.6852589641434, Blast_Score=102, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17555706, Length=264, Percent_Identity=31.8181818181818, Blast_Score=102, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17538486, Length=265, Percent_Identity=32.4528301886792, Blast_Score=101, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI72000259, Length=265, Percent_Identity=30.9433962264151, Blast_Score=101, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI17562908, Length=260, Percent_Identity=28.8461538461538, Blast_Score=100, Evalue=8e-22,
Organism=Caenorhabditis elegans, GI17561402, Length=259, Percent_Identity=28.1853281853282, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI71994600, Length=251, Percent_Identity=29.4820717131474, Blast_Score=99, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI17565030, Length=271, Percent_Identity=31.3653136531365, Blast_Score=98, Evalue=6e-21,
Organism=Caenorhabditis elegans, GI71994604, Length=247, Percent_Identity=28.7449392712551, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17536025, Length=267, Percent_Identity=29.2134831460674, Blast_Score=96, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17538182, Length=204, Percent_Identity=34.8039215686275, Blast_Score=96, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17536651, Length=267, Percent_Identity=27.7153558052434, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17544670, Length=261, Percent_Identity=27.2030651340996, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17563726, Length=255, Percent_Identity=28.2352941176471, Blast_Score=91, Evalue=8e-19,
Organism=Caenorhabditis elegans, GI17564282, Length=189, Percent_Identity=29.1005291005291, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17561272, Length=254, Percent_Identity=29.5275590551181, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17567345, Length=245, Percent_Identity=24.0816326530612, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI115534694, Length=246, Percent_Identity=27.2357723577236, Blast_Score=74, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI193203117, Length=188, Percent_Identity=29.2553191489362, Blast_Score=68, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI193203115, Length=193, Percent_Identity=29.0155440414508, Blast_Score=68, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI71982365, Length=200, Percent_Identity=27, Blast_Score=67, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI17568967, Length=195, Percent_Identity=24.1025641025641, Blast_Score=65, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6324126, Length=249, Percent_Identity=29.718875502008, Blast_Score=81, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6322861, Length=194, Percent_Identity=28.3505154639175, Blast_Score=80, Evalue=3e-16,
Organism=Saccharomyces cerevisiae, GI6323882, Length=253, Percent_Identity=24.901185770751, Blast_Score=73, Evalue=5e-14,
Organism=Drosophila melanogaster, GI23397609, Length=249, Percent_Identity=34.9397590361446, Blast_Score=124, Evalue=8e-29,
Organism=Drosophila melanogaster, GI21357041, Length=252, Percent_Identity=34.9206349206349, Blast_Score=122, Evalue=4e-28,
Organism=Drosophila melanogaster, GI24644339, Length=246, Percent_Identity=33.3333333333333, Blast_Score=119, Evalue=2e-27,
Organism=Drosophila melanogaster, GI28571526, Length=249, Percent_Identity=32.9317269076305, Blast_Score=118, Evalue=5e-27,
Organism=Drosophila melanogaster, GI24639444, Length=250, Percent_Identity=33.2, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI21355319, Length=257, Percent_Identity=33.0739299610895, Blast_Score=106, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24643142, Length=247, Percent_Identity=29.9595141700405, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI21355631, Length=196, Percent_Identity=33.1632653061224, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24644337, Length=258, Percent_Identity=30.2325581395349, Blast_Score=82, Evalue=5e-16,
Organism=Drosophila melanogaster, GI17737361, Length=204, Percent_Identity=32.3529411764706, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI18859837, Length=250, Percent_Identity=27.2, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24581726, Length=196, Percent_Identity=30.6122448979592, Blast_Score=75, Evalue=6e-14,
Organism=Drosophila melanogaster, GI24665243, Length=193, Percent_Identity=29.0155440414508, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI221331218, Length=193, Percent_Identity=29.0155440414508, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24665247, Length=194, Percent_Identity=29.3814432989691, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI221331216, Length=194, Percent_Identity=29.3814432989691, Blast_Score=68, Evalue=9e-12,
Organism=Drosophila melanogaster, GI21357673, Length=201, Percent_Identity=25.3731343283582, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI28571387, Length=208, Percent_Identity=26.4423076923077, Blast_Score=66, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 34485; Mature: 34485

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MQSKTTSEAAKHRRIQRGIDARDKSKGNGKGQHAMQAGARKYPEPPFPEQHHPKPGDEWA
CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
IDPAPLYDAPFYLGSKKLEDKVALITGGDSGIGRSVAVLFAREGADIAIVYLAEDRDAKA
CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCEEEEEEECCCCCHH
TKSAVEAEGRRCILVKADVSERDQCRNAVAQTVKAFGRIDVLVNNAAFQIHSSEFAELTE
HHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCEEEEEECCEEEECCHHHHHHHH
EHFDTTLKTNLYGYFHMAQEAVPHMKPGSAIINTGSVTGIDGSKALVDYSMTKGGIHAFT
HHHCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEECCCCCCEEEEECCCCCHHHHHH
RALSGNLLGKGIRVNAVAPGPVWTPLNPSDKEAGDVSKFGADTPMKRPAQPEELAPAYVF
HHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHCCCEEEE
LASPHCSSYITGEILPVVGGY
EECCCCCCCCCCCEEECCCCC
>Mature Secondary Structure
MQSKTTSEAAKHRRIQRGIDARDKSKGNGKGQHAMQAGARKYPEPPFPEQHHPKPGDEWA
CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
IDPAPLYDAPFYLGSKKLEDKVALITGGDSGIGRSVAVLFAREGADIAIVYLAEDRDAKA
CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCEEEEEEECCCCCHH
TKSAVEAEGRRCILVKADVSERDQCRNAVAQTVKAFGRIDVLVNNAAFQIHSSEFAELTE
HHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCEEEEEECCEEEECCHHHHHHHH
EHFDTTLKTNLYGYFHMAQEAVPHMKPGSAIINTGSVTGIDGSKALVDYSMTKGGIHAFT
HHHCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEECCCCCCEEEEECCCCCHHHHHH
RALSGNLLGKGIRVNAVAPGPVWTPLNPSDKEAGDVSKFGADTPMKRPAQPEELAPAYVF
HHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHCCCEEEE
LASPHCSSYITGEILPVVGGY
EECCCCCCCCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377; 8196543 [H]