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The map label for this gene is ybiR [C]

Identifier: 13476727

GI number: 13476727

Start: 6683719

End: 6684936

Strand: Direct

Name: ybiR [C]

Synonym: mlr8128

Alternate gene names: 13476727

Gene position: 6683719-6684936 (Clockwise)

Preceding gene: 13476726

Following gene: 13476728

Centisome position: 94.99

GC content: 64.7

Gene sequence:

>1218_bases
ATGGGCGCCGCGGCACTGCTGATCCTGGTCCTGACGTATGGCGGCGTCGCCATCGGCCGCATCCCTGGTCTGCGTCTCGA
CCGGGCAGGCATCGCGCTGCTTGGTGGCGCCGCGATGATCGCCATTGGCGCGATCAGCATGGAGGACGCCTACCGCGCCA
TCAATCTCGACACGATCACGCTTCTGCTCGGCATGATGATCGTGGTGGCGCATCTGAAGGTCTCCGGCGCATTTCGCGGT
CTGGGCGCCATCGCCATCGAACACGCGCACGCGCCGTTCATGCTCCTGGTGATGGTGACGCTGCTGACCGGCGTGCTGTC
GGCCTTCCTGGTCAACGATGCCATCTGCCTGGTCATGGCGCCGATCGTCGTCCACGTCACCCGCGTCATCAACCGCAACC
CGATCCCCTATCTGATCGCCACCGCCACCGCATCGAACTGCGGCAGCGTCGCCACCATCACCGGCAACCCGCAGAACATG
GTCATCGGCGCGCTGTCGGGCATTTCCTATCCCGCTTTTTCGGCGGCGCTGGCGCCGGTCGCCTTGTTCGGCCTCGTCGC
GGTCATCGTCATCGTGCGCATCGTCTATCGCGCCGAATTCAGCCGCACCGCTGAATTGACGCCGCATGTCTCGCGCGGCC
GCATGCATCGCGGCCAGGTGCTGAAGGCCGTGATCGTCTGCATCGGGCTGGCCATCGCCTTCTTTGCCGGCGTCTCCGTT
GCCAAGGCTGCATTGATCGGCGGCGCCATCCTCCTGCTCACCCGCGCCATCAAGCCGGACCGCATCTACCGTGAGATCGA
TGGCCCGCTGCTGTTCATGTTCGCCGGTCTGTTCGTGGTGGTCGCCGGGGCCGAAAGGACACTGCTGACCCCAGACATCA
TCGCCTCGGCCAAGAATCTCGGCCTGAACGATGTCTGGCGCCTGTCCGGTTTCACCACGGTGCTCTCCAACATCATGAGC
AATGTGCCGGCGGTGCTTGCGCTGCGACCGTTCATACCTGGGCTGGAGAACCCCGAACGGGCCTGGCTGGTGGTGGCGAT
GAGTTCCACGCTTGCCGGCAATTTCACGCTGCTCGGCTCTGTCGCCAACCTGATCGTCGCCGAACAGTCCAAGACTGCCG
GCACACCCTTGTCCTTCGGTGCCTTCTTCAAGGTCGGCCTGCCGCTGACGCTGATCACGCTCGTCGCCGGTACGGCATGG
CTGGCCTTCGGGTTCTAG

Upstream 100 bases:

>100_bases
TGATCAACCTCGACATCGCCAAAGCTGACATGCAAAACAACGACCGGGCAGACTGCATCGGCGCCACAAGATCGAGCGAG
ACTTTCTACCGATGACATTG

Downstream 100 bases:

>100_bases
CGGGAGTGGCAAAGCGGTGACGAATACGAATCAAGTCGATAGCGGCGATCTGATCCGCCGTGCGGTGGCCGCTTTCAATT
CCGGCAATCACGGCCTGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MGAAALLILVLTYGGVAIGRIPGLRLDRAGIALLGGAAMIAIGAISMEDAYRAINLDTITLLLGMMIVVAHLKVSGAFRG
LGAIAIEHAHAPFMLLVMVTLLTGVLSAFLVNDAICLVMAPIVVHVTRVINRNPIPYLIATATASNCGSVATITGNPQNM
VIGALSGISYPAFSAALAPVALFGLVAVIVIVRIVYRAEFSRTAELTPHVSRGRMHRGQVLKAVIVCIGLAIAFFAGVSV
AKAALIGGAILLLTRAIKPDRIYREIDGPLLFMFAGLFVVVAGAERTLLTPDIIASAKNLGLNDVWRLSGFTTVLSNIMS
NVPAVLALRPFIPGLENPERAWLVVAMSSTLAGNFTLLGSVANLIVAEQSKTAGTPLSFGAFFKVGLPLTLITLVAGTAW
LAFGF

Sequences:

>Translated_405_residues
MGAAALLILVLTYGGVAIGRIPGLRLDRAGIALLGGAAMIAIGAISMEDAYRAINLDTITLLLGMMIVVAHLKVSGAFRG
LGAIAIEHAHAPFMLLVMVTLLTGVLSAFLVNDAICLVMAPIVVHVTRVINRNPIPYLIATATASNCGSVATITGNPQNM
VIGALSGISYPAFSAALAPVALFGLVAVIVIVRIVYRAEFSRTAELTPHVSRGRMHRGQVLKAVIVCIGLAIAFFAGVSV
AKAALIGGAILLLTRAIKPDRIYREIDGPLLFMFAGLFVVVAGAERTLLTPDIIASAKNLGLNDVWRLSGFTTVLSNIMS
NVPAVLALRPFIPGLENPERAWLVVAMSSTLAGNFTLLGSVANLIVAEQSKTAGTPLSFGAFFKVGLPLTLITLVAGTAW
LAFGF
>Mature_404_residues
GAAALLILVLTYGGVAIGRIPGLRLDRAGIALLGGAAMIAIGAISMEDAYRAINLDTITLLLGMMIVVAHLKVSGAFRGL
GAIAIEHAHAPFMLLVMVTLLTGVLSAFLVNDAICLVMAPIVVHVTRVINRNPIPYLIATATASNCGSVATITGNPQNMV
IGALSGISYPAFSAALAPVALFGLVAVIVIVRIVYRAEFSRTAELTPHVSRGRMHRGQVLKAVIVCIGLAIAFFAGVSVA
KAALIGGAILLLTRAIKPDRIYREIDGPLLFMFAGLFVVVAGAERTLLTPDIIASAKNLGLNDVWRLSGFTTVLSNIMSN
VPAVLALRPFIPGLENPERAWLVVAMSSTLAGNFTLLGSVANLIVAEQSKTAGTPLSFGAFFKVGLPLTLITLVAGTAWL
AFGF

Specific function: Unknown

COG id: COG1055

COG function: function code P; Na+/H+ antiporter NhaD and related arsenite permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CitM (TC 2.A.11) transporter family [H]

Homologues:

Organism=Homo sapiens, GI157266326, Length=182, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=1e-11,
Organism=Escherichia coli, GI1787039, Length=320, Percent_Identity=27.5, Blast_Score=86, Evalue=4e-18,
Organism=Drosophila melanogaster, GI19920704, Length=176, Percent_Identity=31.8181818181818, Blast_Score=78, Evalue=9e-15,
Organism=Drosophila melanogaster, GI28574683, Length=176, Percent_Identity=31.8181818181818, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI28574681, Length=176, Percent_Identity=31.8181818181818, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI28574685, Length=176, Percent_Identity=31.8181818181818, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI28574678, Length=176, Percent_Identity=31.8181818181818, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24581759, Length=176, Percent_Identity=31.8181818181818, Blast_Score=78, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000802
- InterPro:   IPR004680 [H]

Pfam domain/function: PF03600 CitMHS [H]

EC number: NA

Molecular weight: Translated: 42213; Mature: 42082

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAAALLILVLTYGGVAIGRIPGLRLDRAGIALLGGAAMIAIGAISMEDAYRAINLDTIT
CCHHHHHHHHHHHCCEEEECCCCCEECCCCHHHHCCHHHHHHHHHHHHHHHHHCCHHHHH
LLLGMMIVVAHLKVSGAFRGLGAIAIEHAHAPFMLLVMVTLLTGVLSAFLVNDAICLVMA
HHHHHHHHHHHHHHHHHHHCHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PIVVHVTRVINRNPIPYLIATATASNCGSVATITGNPQNMVIGALSGISYPAFSAALAPV
HHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEECCCCCEEEEHHCCCCCHHHHHHHHHH
ALFGLVAVIVIVRIVYRAEFSRTAELTPHVSRGRMHRGQVLKAVIVCIGLAIAFFAGVSV
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AKAALIGGAILLLTRAIKPDRIYREIDGPLLFMFAGLFVVVAGAERTLLTPDIIASAKNL
HHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCC
GLNDVWRLSGFTTVLSNIMSNVPAVLALRPFIPGLENPERAWLVVAMSSTLAGNFTLLGS
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCHHHHHH
VANLIVAEQSKTAGTPLSFGAFFKVGLPLTLITLVAGTAWLAFGF
HHHHHHCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GAAALLILVLTYGGVAIGRIPGLRLDRAGIALLGGAAMIAIGAISMEDAYRAINLDTIT
CHHHHHHHHHHHCCEEEECCCCCEECCCCHHHHCCHHHHHHHHHHHHHHHHHCCHHHHH
LLLGMMIVVAHLKVSGAFRGLGAIAIEHAHAPFMLLVMVTLLTGVLSAFLVNDAICLVMA
HHHHHHHHHHHHHHHHHHHCHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PIVVHVTRVINRNPIPYLIATATASNCGSVATITGNPQNMVIGALSGISYPAFSAALAPV
HHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEECCCCCEEEEHHCCCCCHHHHHHHHHH
ALFGLVAVIVIVRIVYRAEFSRTAELTPHVSRGRMHRGQVLKAVIVCIGLAIAFFAGVSV
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AKAALIGGAILLLTRAIKPDRIYREIDGPLLFMFAGLFVVVAGAERTLLTPDIIASAKNL
HHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCC
GLNDVWRLSGFTTVLSNIMSNVPAVLALRPFIPGLENPERAWLVVAMSSTLAGNFTLLGS
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCHHHHHH
VANLIVAEQSKTAGTPLSFGAFFKVGLPLTLITLVAGTAWLAFGF
HHHHHHCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]