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The map label for this gene is yedQ [H]

Identifier: 13476725

GI number: 13476725

Start: 6681811

End: 6682401

Strand: Direct

Name: yedQ [H]

Synonym: mlr8123

Alternate gene names: 13476725

Gene position: 6681811-6682401 (Clockwise)

Preceding gene: 13476724

Following gene: 13476726

Centisome position: 94.97

GC content: 63.45

Gene sequence:

>591_bases
ATGTGGAAGATCCGCCAGCTGGCCACAGCCCAACGCGACCTCAGCGTCATCGCCGCGACCGATAGTCTGACGGCGGTGCT
GAACCGCGGCGCCTTCTCCATGCTGGTCGAGGCCTATCTCGAGCAGACCCACAAGCAGGCGCAGACCCGTTCCGGCGCGC
TGCTGATTATCGACGCCGACCATTTCAAGTCGATCAACGACCGCCTTGGTCATGACTGTGGCGACCAGGCGCTCAAGCTG
ATCGCGCAGGCGATCAAGGGACAGCTGCGCGGCAGCGATATTGTCGGCCGCATTGGCGGCGAGGAGTTTGGCGTGTTTCT
CCCTGGTGTCGACCCCTCGCAATCCTGGCTGGTCGCCGAAGGCATCCGCCGGCGGATTCGCGAAATGGATTTTTCGCCCG
GCGGCCGCGCCTGTCCGCTTTCCGTCAGCATCGGAGGCACCAGTTTCAGCGGGCCGACAACTTACGAGGCGATATTCTCC
GCCGCCGACAGACGGCTCTATGCCGCCAAGTCGAATGGACGCGATCAGGTCAGTTTCGACCCAGAGGAAGCCGCCCTGGT
GTCTCAGCCCAGTGCCACGACGGTGCATTGA

Upstream 100 bases:

>100_bases
CTTCAATTTCCCCTATCTCTCGCCCGAGGCCGTCTGGCGCGCGCAAATGACGGACCTCATGCTTCCCCTGGTGCTGGGCG
GGTCGTTTCTGTTTTTCCTG

Downstream 100 bases:

>100_bases
CCTCAGCCTTGCATGCGCGCGCGAAGGCTGCCGCTTCCTTGACGCCTTCTTGTCGGTGTGCTTCCTCCGGCTAAGGTGAT
GTATTGGCATCGCCAGAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MWKIRQLATAQRDLSVIAATDSLTAVLNRGAFSMLVEAYLEQTHKQAQTRSGALLIIDADHFKSINDRLGHDCGDQALKL
IAQAIKGQLRGSDIVGRIGGEEFGVFLPGVDPSQSWLVAEGIRRRIREMDFSPGGRACPLSVSIGGTSFSGPTTYEAIFS
AADRRLYAAKSNGRDQVSFDPEEAALVSQPSATTVH

Sequences:

>Translated_196_residues
MWKIRQLATAQRDLSVIAATDSLTAVLNRGAFSMLVEAYLEQTHKQAQTRSGALLIIDADHFKSINDRLGHDCGDQALKL
IAQAIKGQLRGSDIVGRIGGEEFGVFLPGVDPSQSWLVAEGIRRRIREMDFSPGGRACPLSVSIGGTSFSGPTTYEAIFS
AADRRLYAAKSNGRDQVSFDPEEAALVSQPSATTVH
>Mature_196_residues
MWKIRQLATAQRDLSVIAATDSLTAVLNRGAFSMLVEAYLEQTHKQAQTRSGALLIIDADHFKSINDRLGHDCGDQALKL
IAQAIKGQLRGSDIVGRIGGEEFGVFLPGVDPSQSWLVAEGIRRRIREMDFSPGGRACPLSVSIGGTSFSGPTTYEAIFS
AADRRLYAAKSNGRDQVSFDPEEAALVSQPSATTVH

Specific function: Involves in the regulation of cellulose production [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

Organism=Escherichia coli, GI87082007, Length=179, Percent_Identity=38.5474860335196, Blast_Score=107, Evalue=7e-25,
Organism=Escherichia coli, GI145693134, Length=160, Percent_Identity=36.875, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1786584, Length=175, Percent_Identity=34.8571428571429, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1787262, Length=177, Percent_Identity=33.8983050847458, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1788381, Length=186, Percent_Identity=33.3333333333333, Blast_Score=96, Evalue=1e-21,
Organism=Escherichia coli, GI1787802, Length=182, Percent_Identity=32.4175824175824, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI87081881, Length=167, Percent_Identity=34.7305389221557, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI87081974, Length=160, Percent_Identity=35, Blast_Score=80, Evalue=7e-17,
Organism=Escherichia coli, GI1788085, Length=166, Percent_Identity=29.5180722891566, Blast_Score=75, Evalue=2e-15,
Organism=Escherichia coli, GI1787541, Length=175, Percent_Identity=33.1428571428571, Blast_Score=75, Evalue=2e-15,
Organism=Escherichia coli, GI1787056, Length=164, Percent_Identity=32.3170731707317, Blast_Score=70, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160 [H]

Pfam domain/function: PF00990 GGDEF [H]

EC number: NA

Molecular weight: Translated: 21133; Mature: 21133

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWKIRQLATAQRDLSVIAATDSLTAVLNRGAFSMLVEAYLEQTHKQAQTRSGALLIIDAD
CCCHHHHHHHHHCCEEEEECHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECH
HFKSINDRLGHDCGDQALKLIAQAIKGQLRGSDIVGRIGGEEFGVFLPGVDPSQSWLVAE
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEECCCCCCCCHHHHH
GIRRRIREMDFSPGGRACPLSVSIGGTSFSGPTTYEAIFSAADRRLYAAKSNGRDQVSFD
HHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHEEEEECCCCCCCCCCC
PEEAALVSQPSATTVH
CHHHHHCCCCCCCCCC
>Mature Secondary Structure
MWKIRQLATAQRDLSVIAATDSLTAVLNRGAFSMLVEAYLEQTHKQAQTRSGALLIIDAD
CCCHHHHHHHHHCCEEEEECHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECH
HFKSINDRLGHDCGDQALKLIAQAIKGQLRGSDIVGRIGGEEFGVFLPGVDPSQSWLVAE
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEECCCCCCCCHHHHH
GIRRRIREMDFSPGGRACPLSVSIGGTSFSGPTTYEAIFSAADRRLYAAKSNGRDQVSFD
HHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHEEEEECCCCCCCCCCC
PEEAALVSQPSATTVH
CHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]