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The map label for this gene is 13476713

Identifier: 13476713

GI number: 13476713

Start: 6671300

End: 6672157

Strand: Direct

Name: 13476713

Synonym: mlr8107

Alternate gene names: NA

Gene position: 6671300-6672157 (Clockwise)

Preceding gene: 13476711

Following gene: 13476714

Centisome position: 94.82

GC content: 61.31

Gene sequence:

>858_bases
ATGCGTTTGAAGTTCGTCCCGCCCTTGATGCCGACCCTTGTCGAGCAGCCTCCAGAAGGCGGCGGCTGGATTCACGAAGT
CAAGTTCGACGGCTACCGCTCGCAACTGATCATCGACGAAGACGGAACGCGCATCTACACGCGCAACGGTCACGACTGGA
CAGCCAAATATTCCGACCTGGTGAAAGAGGCTGCTAGCCTAGGTGCCGAGAATGCCATCATCGACGGCGAAATCATCGTT
CTGAACGGGGCCGGCCTGTCCGACTTCGGCGAGCTGCGAAAGGCGATCACCAGGCGGCAACACGACCTGTATTTCGTGGC
CTTCGACCTTCTGCACCTCAACGGCCACGACCTGCGCGAAATGGCGCTGGAGGAGCGCCGCGAGATCCTGGCCAGCATGA
TCGAGCCCGGCGGGCGTATTCAGTTCAGCGAGCCATTGCCGGGCGAAGCGAAGGCCATCTTCCATCTGCTCGACCAGGCT
GGGCTTGAGGGTATGGTTTCGAAGCGCAAGGATAGCAAATACCGCAGCGGTCCGTCGACGAACTGGTTGAAGGCGAAATG
CTACTCGGTCGACGAATATGAACTGCTCGGCGTGGAGCGCGAGGCTGGCAAGCCCGCCTTCGCCCTGATGGCCGAGCGTG
GCACCGGGCGGTATGTCGGGAGCGCCTTCATCACCTTGAATCGCGAGATGCGCGAACGCCTTTGGAAACGCGTTCAGCAG
CATGAAGGAGCGCCGCCGAAGGGGATGAAGCGGCCGGCGACGCAATGGGTCAAGCCAGGGCTGATCGGCCGTGTGAAGCA
TCTGCGGGGCGAGGAAGACCTCCGCCACGCTTCGTTGCAGGATTTCCGTGAGGAATGA

Upstream 100 bases:

>100_bases
CGGCTTCGATCTTCATCACGTTCAAACATGCAATTCGTCTAAAATGTTCCGGAACTATTTTAGCGCAGGCTAATTGAATA
GCGGTTTGTGAGTCCTGTGC

Downstream 100 bases:

>100_bases
GCACGCGAGGCAGCGATTTTGTCTACCATTGGATATCGGACCACTTATCCGACGATCCGATCAGTGACCACGTACTGCTG
ATCATTGAAATGGCTGTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MRLKFVPPLMPTLVEQPPEGGGWIHEVKFDGYRSQLIIDEDGTRIYTRNGHDWTAKYSDLVKEAASLGAENAIIDGEIIV
LNGAGLSDFGELRKAITRRQHDLYFVAFDLLHLNGHDLREMALEERREILASMIEPGGRIQFSEPLPGEAKAIFHLLDQA
GLEGMVSKRKDSKYRSGPSTNWLKAKCYSVDEYELLGVEREAGKPAFALMAERGTGRYVGSAFITLNREMRERLWKRVQQ
HEGAPPKGMKRPATQWVKPGLIGRVKHLRGEEDLRHASLQDFREE

Sequences:

>Translated_285_residues
MRLKFVPPLMPTLVEQPPEGGGWIHEVKFDGYRSQLIIDEDGTRIYTRNGHDWTAKYSDLVKEAASLGAENAIIDGEIIV
LNGAGLSDFGELRKAITRRQHDLYFVAFDLLHLNGHDLREMALEERREILASMIEPGGRIQFSEPLPGEAKAIFHLLDQA
GLEGMVSKRKDSKYRSGPSTNWLKAKCYSVDEYELLGVEREAGKPAFALMAERGTGRYVGSAFITLNREMRERLWKRVQQ
HEGAPPKGMKRPATQWVKPGLIGRVKHLRGEEDLRHASLQDFREE
>Mature_285_residues
MRLKFVPPLMPTLVEQPPEGGGWIHEVKFDGYRSQLIIDEDGTRIYTRNGHDWTAKYSDLVKEAASLGAENAIIDGEIIV
LNGAGLSDFGELRKAITRRQHDLYFVAFDLLHLNGHDLREMALEERREILASMIEPGGRIQFSEPLPGEAKAIFHLLDQA
GLEGMVSKRKDSKYRSGPSTNWLKAKCYSVDEYELLGVEREAGKPAFALMAERGTGRYVGSAFITLNREMRERLWKRVQQ
HEGAPPKGMKRPATQWVKPGLIGRVKHLRGEEDLRHASLQDFREE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATP-dependent DNA ligase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012309
- InterPro:   IPR012310
- InterPro:   IPR014146
- InterPro:   IPR002755
- InterPro:   IPR014144
- InterPro:   IPR014145
- InterPro:   IPR012340
- InterPro:   IPR016027 [H]

Pfam domain/function: PF04679 DNA_ligase_A_C; PF01068 DNA_ligase_A_M; PF01896 DNA_primase_S [H]

EC number: NA

Molecular weight: Translated: 32320; Mature: 32320

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: PS50160 DNA_LIGASE_A3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLKFVPPLMPTLVEQPPEGGGWIHEVKFDGYRSQLIIDEDGTRIYTRNGHDWTAKYSDL
CCCCCCCCHHHHHHCCCCCCCCEEEEEEECCCCEEEEEECCCCEEEECCCCCHHHHHHHH
VKEAASLGAENAIIDGEIIVLNGAGLSDFGELRKAITRRQHDLYFVAFDLLHLNGHDLRE
HHHHHHCCCCCEEECCEEEEEECCCCCHHHHHHHHHHHHHCCEEEEEEEEHHCCCCHHHH
MALEERREILASMIEPGGRIQFSEPLPGEAKAIFHLLDQAGLEGMVSKRKDSKYRSGPST
HHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCC
NWLKAKCYSVDEYELLGVEREAGKPAFALMAERGTGRYVGSAFITLNREMRERLWKRVQQ
CCEEEEECCCCCHHEEECCCCCCCCCEEEEECCCCCCCHHHEEEEECHHHHHHHHHHHHH
HEGAPPKGMKRPATQWVKPGLIGRVKHLRGEEDLRHASLQDFREE
HCCCCCCCCCCCHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRLKFVPPLMPTLVEQPPEGGGWIHEVKFDGYRSQLIIDEDGTRIYTRNGHDWTAKYSDL
CCCCCCCCHHHHHHCCCCCCCCEEEEEEECCCCEEEEEECCCCEEEECCCCCHHHHHHHH
VKEAASLGAENAIIDGEIIVLNGAGLSDFGELRKAITRRQHDLYFVAFDLLHLNGHDLRE
HHHHHHCCCCCEEECCEEEEEECCCCCHHHHHHHHHHHHHCCEEEEEEEEHHCCCCHHHH
MALEERREILASMIEPGGRIQFSEPLPGEAKAIFHLLDQAGLEGMVSKRKDSKYRSGPST
HHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCC
NWLKAKCYSVDEYELLGVEREAGKPAFALMAERGTGRYVGSAFITLNREMRERLWKRVQQ
CCEEEEECCCCCHHEEECCCCCCCCCEEEEECCCCCCCHHHEEEEECHHHHHHHHHHHHH
HEGAPPKGMKRPATQWVKPGLIGRVKHLRGEEDLRHASLQDFREE
HCCCCCCCCCCCHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]