| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13476666
Identifier: 13476666
GI number: 13476666
Start: 6629050
End: 6629889
Strand: Direct
Name: 13476666
Synonym: mlr8052
Alternate gene names: NA
Gene position: 6629050-6629889 (Clockwise)
Preceding gene: 13476665
Following gene: 13476667
Centisome position: 94.22
GC content: 60.95
Gene sequence:
>840_bases ATGAGCGACAATAAGCCGACCGTTGACGTTACCAAGGACTGGCAAGCATCGCAGGGCCAGAAGTCCGGCGCCACGCGCCT TCGCCTTTTCGCAGTGCTGTCGTGGGTCGTTGCCATTGGCGGCGAGATCGCCGGCGTTGTTTTGCTCTACCGGCGCAAAT TCGACCATGGAAACCTGCCGCTGCTGATCGGCATCTTAGTCGGGATCGCGATTTTCGCCATCGCCGGAAACTTGTTTTGG AAGGCGGCCAACAGGCAGGACCCGGCCCGCACATCCGAGACATTCCGGTTCTTCGTCCAGAATCAGCTCGGCGCGATTAT CACGCTGATTGCCTTCCTGCCGCTGGTTATCCTGATCTTCACCGACAAGAACTTGGATCCGCAGAGCAAGAAGGTTGCCG GCGCCGTCGGCGCTGTGCTAGCGGTGCTGGCGACAGTGATCGGGATCAGCTTCCAACCCCCATCGGTCGAGCAGTACACG CAGGACATGAACCAGTGTGCGGCACAGATCAAGGCGGGCGAGCCGACCACAGCCTGTTCGCCCGAGGTCGCTGCCCAGGC TCAGGCGATCGCCACCGACTCCACCACGGTGGCTGCTGCGACGAAGGACTCGGCACACCCCAATGGCCAGGATATCGTCT ATTGGATCGCGCCGGAAAACGGCGCCGCTAAGTCCGAGACAGAGCATGTCTTCCACCTCTGCGCAGCCGTCAGTCCGCTG AAGGACAAGACCGTGAACAGCGGTACCGTGACGGAGGCCTACGCACAGAACGCCATCCGCATCACCAAGCAGATCGGGAT GGAACAGAAGCAGTGCGGGTTCACGACCACGACGCCATAA
Upstream 100 bases:
>100_bases AGGCAGGCTACGATGACGTTCGATCAATGACGCTGTGCCGGGCGGATTGACCTTTCGATCTGACTCTATCCTGTAAAGTG TCGATACCGGGGACCTAGTC
Downstream 100 bases:
>100_bases ATCGACGATGAACTGGCCGTGCGAGGCGAGACGCTGCTCGAAGCCCTCAACCGCCATCGCGGCAAGGGCCAGCAGAAAGT CACGGTCGAGCATGTCCACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MSDNKPTVDVTKDWQASQGQKSGATRLRLFAVLSWVVAIGGEIAGVVLLYRRKFDHGNLPLLIGILVGIAIFAIAGNLFW KAANRQDPARTSETFRFFVQNQLGAIITLIAFLPLVILIFTDKNLDPQSKKVAGAVGAVLAVLATVIGISFQPPSVEQYT QDMNQCAAQIKAGEPTTACSPEVAAQAQAIATDSTTVAAATKDSAHPNGQDIVYWIAPENGAAKSETEHVFHLCAAVSPL KDKTVNSGTVTEAYAQNAIRITKQIGMEQKQCGFTTTTP
Sequences:
>Translated_279_residues MSDNKPTVDVTKDWQASQGQKSGATRLRLFAVLSWVVAIGGEIAGVVLLYRRKFDHGNLPLLIGILVGIAIFAIAGNLFW KAANRQDPARTSETFRFFVQNQLGAIITLIAFLPLVILIFTDKNLDPQSKKVAGAVGAVLAVLATVIGISFQPPSVEQYT QDMNQCAAQIKAGEPTTACSPEVAAQAQAIATDSTTVAAATKDSAHPNGQDIVYWIAPENGAAKSETEHVFHLCAAVSPL KDKTVNSGTVTEAYAQNAIRITKQIGMEQKQCGFTTTTP >Mature_278_residues SDNKPTVDVTKDWQASQGQKSGATRLRLFAVLSWVVAIGGEIAGVVLLYRRKFDHGNLPLLIGILVGIAIFAIAGNLFWK AANRQDPARTSETFRFFVQNQLGAIITLIAFLPLVILIFTDKNLDPQSKKVAGAVGAVLAVLATVIGISFQPPSVEQYTQ DMNQCAAQIKAGEPTTACSPEVAAQAQAIATDSTTVAAATKDSAHPNGQDIVYWIAPENGAAKSETEHVFHLCAAVSPLK DKTVNSGTVTEAYAQNAIRITKQIGMEQKQCGFTTTTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29754; Mature: 29623
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDNKPTVDVTKDWQASQGQKSGATRLRLFAVLSWVVAIGGEIAGVVLLYRRKFDHGNLP CCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCH LLIGILVGIAIFAIAGNLFWKAANRQDPARTSETFRFFVQNQLGAIITLIAFLPLVILIF HHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TDKNLDPQSKKVAGAVGAVLAVLATVIGISFQPPSVEQYTQDMNQCAAQIKAGEPTTACS CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC PEVAAQAQAIATDSTTVAAATKDSAHPNGQDIVYWIAPENGAAKSETEHVFHLCAAVSPL CHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCH KDKTVNSGTVTEAYAQNAIRITKQIGMEQKQCGFTTTTP HCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCCC >Mature Secondary Structure SDNKPTVDVTKDWQASQGQKSGATRLRLFAVLSWVVAIGGEIAGVVLLYRRKFDHGNLP CCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCH LLIGILVGIAIFAIAGNLFWKAANRQDPARTSETFRFFVQNQLGAIITLIAFLPLVILIF HHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TDKNLDPQSKKVAGAVGAVLAVLATVIGISFQPPSVEQYTQDMNQCAAQIKAGEPTTACS CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC PEVAAQAQAIATDSTTVAAATKDSAHPNGQDIVYWIAPENGAAKSETEHVFHLCAAVSPL CHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCH KDKTVNSGTVTEAYAQNAIRITKQIGMEQKQCGFTTTTP HCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA