| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13476660
Identifier: 13476660
GI number: 13476660
Start: 6624180
End: 6624425
Strand: Direct
Name: 13476660
Synonym: msr8045
Alternate gene names: NA
Gene position: 6624180-6624425 (Clockwise)
Preceding gene: 13476659
Following gene: 13476662
Centisome position: 94.15
GC content: 63.41
Gene sequence:
>246_bases ATGGCCGTGGCTAAGAAGGACCAGGAGCGTGTGAACTACGCCTGGATGTATGGCGCACAGGCGCGCAAGGACGGCAAGGA ACGCGCCGTGCCGGATTACTGGCAGGAGTTGGCCGACGCCTGGCTGCAGGGTTTTGATGGAGTCTCTGCACCGGGCGGAG CCAAAAACAGGCCCGTCGGCGATCAGCTGGAAGCCGAACTCGACGAGTCTGCGGTGATCGAACCGACCGGGCCTAGCGGG CGATAA
Upstream 100 bases:
>100_bases CCTGCATATCCATGCCGACGACACTAGATATCGGGCCGTGGTGCGGTGGCGAAAGAACGAGCGCCTTGGCGTTCAGATCT ATTGAAAGAGAAGGCTGACG
Downstream 100 bases:
>100_bases TCCATTCCAGAAAGGCGGAACATTTTCAGCGGGTCGGCATTCATCGGTCAGTTAGCCTAGGGAGGCTTTCTTTGACCCAA CGACGGATCGATAGGGAACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 81; Mature: 80
Protein sequence:
>81_residues MAVAKKDQERVNYAWMYGAQARKDGKERAVPDYWQELADAWLQGFDGVSAPGGAKNRPVGDQLEAELDESAVIEPTGPSG R
Sequences:
>Translated_81_residues MAVAKKDQERVNYAWMYGAQARKDGKERAVPDYWQELADAWLQGFDGVSAPGGAKNRPVGDQLEAELDESAVIEPTGPSG R >Mature_80_residues AVAKKDQERVNYAWMYGAQARKDGKERAVPDYWQELADAWLQGFDGVSAPGGAKNRPVGDQLEAELDESAVIEPTGPSGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8851; Mature: 8720
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVAKKDQERVNYAWMYGAQARKDGKERAVPDYWQELADAWLQGFDGVSAPGGAKNRPVG CCCCCCCHHHCCCHHCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC DQLEAELDESAVIEPTGPSGR CHHHHCCCCCEEECCCCCCCC >Mature Secondary Structure AVAKKDQERVNYAWMYGAQARKDGKERAVPDYWQELADAWLQGFDGVSAPGGAKNRPVG CCCCCCHHHCCCHHCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC DQLEAELDESAVIEPTGPSGR CHHHHCCCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA