| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13476644
Identifier: 13476644
GI number: 13476644
Start: 6608697
End: 6610994
Strand: Direct
Name: 13476644
Synonym: mlr8028
Alternate gene names: NA
Gene position: 6608697-6610994 (Clockwise)
Preceding gene: 13476643
Following gene: 13476645
Centisome position: 93.93
GC content: 63.1
Gene sequence:
>2298_bases ATGGACTGGCGTGGCATGGCGCATAGCGTGAACCCGTTCGACGATGCCCTGCGCCAGGCGCTGGTGACAGCGTCGCGCAA GGGCACTTACAATCCCGGCATCGGCGCGTTCGAGACGGCGACGACACAGGAGATCGTCGCCCAAGGCTGGAGCGGCGAAT ATCGCTGGCCGGTCCATCGCGACCCGATCTTCACGCCGATCTTCACCGCCATTCTCGGCAGCGGCGGTTTCTCGCTCTTC GGTGCGACCATCTCCTACGCGGCGATCGCGTCGGCGATCGTCACCACGGCGATTGTCGCCGGCGTGCAATATCTCCTGAC GCCGAAGCCGCCGAAACCGGAGGACGGCCGTGCGCCGCTCACGCAACCGATCCCCTATCGCTTCTGGGGTGTCGGCGAGG CCAGGCTGGCCGGCGCGATGATGCTATGGGAGGCGCTCGACAACCGCATGTTCTCGGTACAGGCCATCGTCGGCCACCGC ATCAATGCCTACACCGGCTACTACATGAACGACGACAAGGTCGCAGTCGTCGGCGGCCACGTTCAATCCCCCGGCGCAGG TCGCTACGTCGATGATGACAGAGATCTTGTCTTTATCTTCCCTCGCCTTGGCGTGGTGCCTGAAACGCCGATCGCCGATT TCGTTACCCTCCTAAGCGGCCAAGGCATCTGGACGAACGATCATCGCGGCGATGGACAGGCCTCCGTCGGAATGATCTGC ATCGGCCCCGGGGCCGACAATTTCCTGAAGAGCTTCCCCTATGGCAAGCCGGCGCTGTCGGTTGTTGCCGAGCTTGCCCT GGTCTGGGATTTCCGCAACCCGTCGCAAAGTCCTGAAGACCCCTCGACCTGGGCGTTCACCCGCAATCCTATCCTTCACC TCGCCTGGCACGAATGTTTCAACCCGTTCGGCACCAAGCGAGATTTCCGCAAGGCGCTGCTGCCTGTTCTCGACATGTGG CAGGAGGAAGCCGATGTCTGCGACGAGGATGTGCCAAGGGCTTCCGGCGGCACGGAAAAGCGCTACGAATGCGGCGGCTT CGACACGACCGAGCACGATCCGAAAAGCGGCACCAATGCCATCCTAGCGACGTGCGACGGCTGGATGTGCGAACGCGGCG ATGGCGCCTTGCTTGTCGTCGCCGGCAAGTTCCGCGAAAAATATGTCGCCACGCTGACCGATGCCGACATCGTCGGCCAC ACCGTGCAGCATGACGTGTTGCCGGAGGAAGAAGTCAATCAGTTCATCCCGAAATTCACCTATCCGGCGACGGACTATAC GACGACGGATACCGACTACTTCGAGGATACTGCAGCGCAAATCGCGGCTGGTCGCGTGTTGCCGCAGGACGGCAACTATA TCTGGTGCCAGCAATGGCGCCAGGCTCGCCGGCTGGGCAAACGCGAATTTGCCCGTGCGCGCGCCAAGAAGCGCGGCACG CTCGACGTCAGGTTCACGGGCATCAATGCCATCTACGCGCCGTGGGTTCGGCTGAACACCCCGCGTCGGTTGCCGTCGCT CAACGGCAAGTTGATCAACAACCGCCGGTCTGTCCTGACGGTGTCGCGCGGCGGTTTCCAGATGACCTTTGTGATGATGC CCAACGATATCGATGCCTGGGACCCGGCGGTCGATGAAGGATCGGCGCCGCCAGTGCCGCCAAAGCCGGTATCGGACGGC ATTCCGATCCCGATCATCGATACAGCGGTGGCAGTCTCCGGCGGCGGCACCGTGTACATCCGCGTCGTGCTGATCGATCC GAACCGGATCGATGTCACGCCGGTTGTTCACTACCGGATATCGGATGTCGGCGGCGGCGTTCCCGGCGCCTGGGTGGAGC AGAAGTTCCCGGGCGCGACACCGTCAGGCGGCCTTATCCCCCTCAACACAAATCCAGTGCCTGCCAACAACTCGATCGAC ATTCAGGCCGCCTATATCGGCTCCAACAACAGCTATGGCACGTGGACAAGCACGGTGACCCTGGTCTCGACGGTTGACAC GACGCCGCCGGCCGCCGTCTCCAGCGTTGTCGCGACGGGCAGTGTCGGCCAGGTCGCGCTCACCTGGAACACGCCGAATT CCGGCAACTATGTCGCCACCAACATCAGACGCAACACCGTGAACAATGAGGGCACCGCGACCCTCGTTCGCACGGAATAC GGCGCGCCGTCGTCGGCCGATGCCTGGACGGACGCCGGGCGCGCGGCCGGCACCTATTACTATTGGCTGCGCTCGGCGAA CGGATCCGGTGTCGAAAGCACCACAAGCGTCGCCACCGGGCCGAAAGTCGTCACCTAA
Upstream 100 bases:
>100_bases GCTTCGACGCCGGTGTTGAGGTCAAGGAAATCCCCGGCATCCGCTTCGGCCCGCTCTGGGCTGTCATGTCGGCGCGCGGC GCCATCGTCAAGCATCTCGA
Downstream 100 bases:
>100_bases AGCCCACTCGATCATTCTCATTCGCTCGTCTGTTCGCGAAAAGGAAAACCATCCATGGCAGTCGTACCCTTCAACACGCT TTTCGCTGACGGCCCTGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 765; Mature: 765
Protein sequence:
>765_residues MDWRGMAHSVNPFDDALRQALVTASRKGTYNPGIGAFETATTQEIVAQGWSGEYRWPVHRDPIFTPIFTAILGSGGFSLF GATISYAAIASAIVTTAIVAGVQYLLTPKPPKPEDGRAPLTQPIPYRFWGVGEARLAGAMMLWEALDNRMFSVQAIVGHR INAYTGYYMNDDKVAVVGGHVQSPGAGRYVDDDRDLVFIFPRLGVVPETPIADFVTLLSGQGIWTNDHRGDGQASVGMIC IGPGADNFLKSFPYGKPALSVVAELALVWDFRNPSQSPEDPSTWAFTRNPILHLAWHECFNPFGTKRDFRKALLPVLDMW QEEADVCDEDVPRASGGTEKRYECGGFDTTEHDPKSGTNAILATCDGWMCERGDGALLVVAGKFREKYVATLTDADIVGH TVQHDVLPEEEVNQFIPKFTYPATDYTTTDTDYFEDTAAQIAAGRVLPQDGNYIWCQQWRQARRLGKREFARARAKKRGT LDVRFTGINAIYAPWVRLNTPRRLPSLNGKLINNRRSVLTVSRGGFQMTFVMMPNDIDAWDPAVDEGSAPPVPPKPVSDG IPIPIIDTAVAVSGGGTVYIRVVLIDPNRIDVTPVVHYRISDVGGGVPGAWVEQKFPGATPSGGLIPLNTNPVPANNSID IQAAYIGSNNSYGTWTSTVTLVSTVDTTPPAAVSSVVATGSVGQVALTWNTPNSGNYVATNIRRNTVNNEGTATLVRTEY GAPSSADAWTDAGRAAGTYYYWLRSANGSGVESTTSVATGPKVVT
Sequences:
>Translated_765_residues MDWRGMAHSVNPFDDALRQALVTASRKGTYNPGIGAFETATTQEIVAQGWSGEYRWPVHRDPIFTPIFTAILGSGGFSLF GATISYAAIASAIVTTAIVAGVQYLLTPKPPKPEDGRAPLTQPIPYRFWGVGEARLAGAMMLWEALDNRMFSVQAIVGHR INAYTGYYMNDDKVAVVGGHVQSPGAGRYVDDDRDLVFIFPRLGVVPETPIADFVTLLSGQGIWTNDHRGDGQASVGMIC IGPGADNFLKSFPYGKPALSVVAELALVWDFRNPSQSPEDPSTWAFTRNPILHLAWHECFNPFGTKRDFRKALLPVLDMW QEEADVCDEDVPRASGGTEKRYECGGFDTTEHDPKSGTNAILATCDGWMCERGDGALLVVAGKFREKYVATLTDADIVGH TVQHDVLPEEEVNQFIPKFTYPATDYTTTDTDYFEDTAAQIAAGRVLPQDGNYIWCQQWRQARRLGKREFARARAKKRGT LDVRFTGINAIYAPWVRLNTPRRLPSLNGKLINNRRSVLTVSRGGFQMTFVMMPNDIDAWDPAVDEGSAPPVPPKPVSDG IPIPIIDTAVAVSGGGTVYIRVVLIDPNRIDVTPVVHYRISDVGGGVPGAWVEQKFPGATPSGGLIPLNTNPVPANNSID IQAAYIGSNNSYGTWTSTVTLVSTVDTTPPAAVSSVVATGSVGQVALTWNTPNSGNYVATNIRRNTVNNEGTATLVRTEY GAPSSADAWTDAGRAAGTYYYWLRSANGSGVESTTSVATGPKVVT >Mature_765_residues MDWRGMAHSVNPFDDALRQALVTASRKGTYNPGIGAFETATTQEIVAQGWSGEYRWPVHRDPIFTPIFTAILGSGGFSLF GATISYAAIASAIVTTAIVAGVQYLLTPKPPKPEDGRAPLTQPIPYRFWGVGEARLAGAMMLWEALDNRMFSVQAIVGHR INAYTGYYMNDDKVAVVGGHVQSPGAGRYVDDDRDLVFIFPRLGVVPETPIADFVTLLSGQGIWTNDHRGDGQASVGMIC IGPGADNFLKSFPYGKPALSVVAELALVWDFRNPSQSPEDPSTWAFTRNPILHLAWHECFNPFGTKRDFRKALLPVLDMW QEEADVCDEDVPRASGGTEKRYECGGFDTTEHDPKSGTNAILATCDGWMCERGDGALLVVAGKFREKYVATLTDADIVGH TVQHDVLPEEEVNQFIPKFTYPATDYTTTDTDYFEDTAAQIAAGRVLPQDGNYIWCQQWRQARRLGKREFARARAKKRGT LDVRFTGINAIYAPWVRLNTPRRLPSLNGKLINNRRSVLTVSRGGFQMTFVMMPNDIDAWDPAVDEGSAPPVPPKPVSDG IPIPIIDTAVAVSGGGTVYIRVVLIDPNRIDVTPVVHYRISDVGGGVPGAWVEQKFPGATPSGGLIPLNTNPVPANNSID IQAAYIGSNNSYGTWTSTVTLVSTVDTTPPAAVSSVVATGSVGQVALTWNTPNSGNYVATNIRRNTVNNEGTATLVRTEY GAPSSADAWTDAGRAAGTYYYWLRSANGSGVESTTSVATGPKVVT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 82836; Mature: 82836
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDWRGMAHSVNPFDDALRQALVTASRKGTYNPGIGAFETATTQEIVAQGWSGEYRWPVHR CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCC DPIFTPIFTAILGSGGFSLFGATISYAAIASAIVTTAIVAGVQYLLTPKPPKPEDGRAPL CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCC TQPIPYRFWGVGEARLAGAMMLWEALDNRMFSVQAIVGHRINAYTGYYMNDDKVAVVGGH CCCCCEEEECCCHHHHHHHHHHHHHHCCCEEEEEEHHCCCEEEEEEEEECCCEEEEEECC VQSPGAGRYVDDDRDLVFIFPRLGVVPETPIADFVTLLSGQGIWTNDHRGDGQASVGMIC CCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCEECCCCCCCCCCCEEEEE IGPGADNFLKSFPYGKPALSVVAELALVWDFRNPSQSPEDPSTWAFTRNPILHLAWHECF ECCCCHHHHHHCCCCCHHHHHHHHHHHEEECCCCCCCCCCCCCEEEECCCEEEEEHHHHC NPFGTKRDFRKALLPVLDMWQEEADVCDEDVPRASGGTEKRYECGGFDTTEHDPKSGTNA CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCE ILATCDGWMCERGDGALLVVAGKFREKYVATLTDADIVGHTVQHDVLPEEEVNQFIPKFT EEEECCCCEEECCCCEEEEEECCCCCCEEEEECCCHHHCCHHHHCCCCHHHHHHHCCCCC YPATDYTTTDTDYFEDTAAQIAAGRVLPQDGNYIWCQQWRQARRLGKREFARARAKKRGT CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCC LDVRFTGINAIYAPWVRLNTPRRLPSLNGKLINNRRSVLTVSRGGFQMTFVMMPNDIDAW EEEEEECCCEEEECEEEECCCCCCCCCCCEEECCCCEEEEEECCCEEEEEEECCCCCCCC DPAVDEGSAPPVPPKPVSDGIPIPIIDTAVAVSGGGTVYIRVVLIDPNRIDVTPVVHYRI CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEECCCCEEEEEEEEEEE SDVGGGVPGAWVEQKFPGATPSGGLIPLNTNPVPANNSIDIQAAYIGSNNSYGTWTSTVT ECCCCCCCCHHHHCCCCCCCCCCCEEECCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEE LVSTVDTTPPAAVSSVVATGSVGQVALTWNTPNSGNYVATNIRRNTVNNEGTATLVRTEY EEEECCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCEEEEEEEC GAPSSADAWTDAGRAAGTYYYWLRSANGSGVESTTSVATGPKVVT CCCCCCCCHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEECC >Mature Secondary Structure MDWRGMAHSVNPFDDALRQALVTASRKGTYNPGIGAFETATTQEIVAQGWSGEYRWPVHR CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCC DPIFTPIFTAILGSGGFSLFGATISYAAIASAIVTTAIVAGVQYLLTPKPPKPEDGRAPL CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCC TQPIPYRFWGVGEARLAGAMMLWEALDNRMFSVQAIVGHRINAYTGYYMNDDKVAVVGGH CCCCCEEEECCCHHHHHHHHHHHHHHCCCEEEEEEHHCCCEEEEEEEEECCCEEEEEECC VQSPGAGRYVDDDRDLVFIFPRLGVVPETPIADFVTLLSGQGIWTNDHRGDGQASVGMIC CCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCEECCCCCCCCCCCEEEEE IGPGADNFLKSFPYGKPALSVVAELALVWDFRNPSQSPEDPSTWAFTRNPILHLAWHECF ECCCCHHHHHHCCCCCHHHHHHHHHHHEEECCCCCCCCCCCCCEEEECCCEEEEEHHHHC NPFGTKRDFRKALLPVLDMWQEEADVCDEDVPRASGGTEKRYECGGFDTTEHDPKSGTNA CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCE ILATCDGWMCERGDGALLVVAGKFREKYVATLTDADIVGHTVQHDVLPEEEVNQFIPKFT EEEECCCCEEECCCCEEEEEECCCCCCEEEEECCCHHHCCHHHHCCCCHHHHHHHCCCCC YPATDYTTTDTDYFEDTAAQIAAGRVLPQDGNYIWCQQWRQARRLGKREFARARAKKRGT CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCC LDVRFTGINAIYAPWVRLNTPRRLPSLNGKLINNRRSVLTVSRGGFQMTFVMMPNDIDAW EEEEEECCCEEEECEEEECCCCCCCCCCCEEECCCCEEEEEECCCEEEEEEECCCCCCCC DPAVDEGSAPPVPPKPVSDGIPIPIIDTAVAVSGGGTVYIRVVLIDPNRIDVTPVVHYRI CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEECCCCEEEEEEEEEEE SDVGGGVPGAWVEQKFPGATPSGGLIPLNTNPVPANNSIDIQAAYIGSNNSYGTWTSTVT ECCCCCCCCHHHHCCCCCCCCCCCEEECCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEE LVSTVDTTPPAAVSSVVATGSVGQVALTWNTPNSGNYVATNIRRNTVNNEGTATLVRTEY EEEECCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCEEEEEEEC GAPSSADAWTDAGRAAGTYYYWLRSANGSGVESTTSVATGPKVVT CCCCCCCCHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA