| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13476628
Identifier: 13476628
GI number: 13476628
Start: 6597563
End: 6598582
Strand: Direct
Name: 13476628
Synonym: mlr8009
Alternate gene names: NA
Gene position: 6597563-6598582 (Clockwise)
Preceding gene: 13476627
Following gene: 13476629
Centisome position: 93.77
GC content: 62.25
Gene sequence:
>1020_bases GTGGGATACCAGCACCGCCGGTGCCGGCCTCGCTGCGCTGCGCCTCGGCTAACAGGAGCGGCCACAATGAACGCACACAT CATGCAGGACGCTCAGCAAGTCGCGATGAGCTTCCTTATCCGTCAGGCCTCGTTGATCGAGCCGACGGTCTACGCGATGC GGTATCAGGACATCCAGTATGCCAACCTGATCCCGGTCGACACTTCGGCGCCGGAGTGGATCCAGTCCGTCACCTACTTC TCGATGGATTCGGTCGGTCAGGCACAGTGGTTCAACGGCAACGCGCACGACGTGCCCAAGGTCGAACTGACCCGCGAGAA GTTCGAGACCACCGTTTCTATGGCGGCGATCGGCTACGGCTACAATCTCGAGGAACTCGGCACCGCTCAGTTGCTTGGCA TGAACCTGAATCCCGACAAGGCCACGACTGCGCGGCGCGCCGCCGAGGAAAGGATCGACAGTACTGCCTTTATCGGCGAT GCCGCCAAAGGCTTCTCGGGTCTGGTCAATTCCTCGACCCCGACCGCAACTCAGGCGCCGGCGGACGGTACGGGTTCGGC CCGCACCTTCGCATCGAAGACGGCGGACCAGGTGCTGCGTGACGTCAATACACAGATCACCGGCATCGCCACGGACACGC TCGGCAACGAGCTCGCCGACACGATCCTACTGCCGTACTCGATCATGCTGGACCTTTCCCAGCGCCGCATCGACACGGTG AACCAGACCACGATACTCGAATGGGTGATGCAGAAGAACGTCTACACCTTGACGACCGGTGCGCCGCTCACGGTTCGAGG CCTGTTCGGCTACCTCGAAACGGCAGGCACCGGTTCTTCCAAGCGTATGGTTGCGTATCGGCGTTCGCCGGAGGTGCTGA AAATGCACGTCCCGATGCCGTTCCGCTTCCTGCCAGCCTGGCAGACCGGGCCGATCAAGTTCGATGTGCCTGGCATCTTC CGCGTCGGCGGCGTCGACATTCGCCGGCCGAAGGCCGTGCGCTATCTCGACGGGATCTAA
Upstream 100 bases:
>100_bases CTTCGGTCGCGGTCGCCGTCGGCGATCCCGTCTACTACGTCCCGGCAACCGGCGTTCTCACGAACTCCGCGTCCGGCAAC ACCCTCATCGCCAACGCTCA
Downstream 100 bases:
>100_bases GGAGGCGATGATGAAGATCACAAACGCCTCTCAAGGTCCGCGCGGGATTCACACCGTGGAAGGTCTGCGGATTATCCCTG TCGGCGGATTTATCGAGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MGYQHRRCRPRCAAPRLTGAATMNAHIMQDAQQVAMSFLIRQASLIEPTVYAMRYQDIQYANLIPVDTSAPEWIQSVTYF SMDSVGQAQWFNGNAHDVPKVELTREKFETTVSMAAIGYGYNLEELGTAQLLGMNLNPDKATTARRAAEERIDSTAFIGD AAKGFSGLVNSSTPTATQAPADGTGSARTFASKTADQVLRDVNTQITGIATDTLGNELADTILLPYSIMLDLSQRRIDTV NQTTILEWVMQKNVYTLTTGAPLTVRGLFGYLETAGTGSSKRMVAYRRSPEVLKMHVPMPFRFLPAWQTGPIKFDVPGIF RVGGVDIRRPKAVRYLDGI
Sequences:
>Translated_339_residues MGYQHRRCRPRCAAPRLTGAATMNAHIMQDAQQVAMSFLIRQASLIEPTVYAMRYQDIQYANLIPVDTSAPEWIQSVTYF SMDSVGQAQWFNGNAHDVPKVELTREKFETTVSMAAIGYGYNLEELGTAQLLGMNLNPDKATTARRAAEERIDSTAFIGD AAKGFSGLVNSSTPTATQAPADGTGSARTFASKTADQVLRDVNTQITGIATDTLGNELADTILLPYSIMLDLSQRRIDTV NQTTILEWVMQKNVYTLTTGAPLTVRGLFGYLETAGTGSSKRMVAYRRSPEVLKMHVPMPFRFLPAWQTGPIKFDVPGIF RVGGVDIRRPKAVRYLDGI >Mature_338_residues GYQHRRCRPRCAAPRLTGAATMNAHIMQDAQQVAMSFLIRQASLIEPTVYAMRYQDIQYANLIPVDTSAPEWIQSVTYFS MDSVGQAQWFNGNAHDVPKVELTREKFETTVSMAAIGYGYNLEELGTAQLLGMNLNPDKATTARRAAEERIDSTAFIGDA AKGFSGLVNSSTPTATQAPADGTGSARTFASKTADQVLRDVNTQITGIATDTLGNELADTILLPYSIMLDLSQRRIDTVN QTTILEWVMQKNVYTLTTGAPLTVRGLFGYLETAGTGSSKRMVAYRRSPEVLKMHVPMPFRFLPAWQTGPIKFDVPGIFR VGGVDIRRPKAVRYLDGI
Specific function: Unknown
COG id: COG4834
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37314; Mature: 37183
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYQHRRCRPRCAAPRLTGAATMNAHIMQDAQQVAMSFLIRQASLIEPTVYAMRYQDIQY CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCC ANLIPVDTSAPEWIQSVTYFSMDSVGQAQWFNGNAHDVPKVELTREKFETTVSMAAIGYG CEEEECCCCCHHHHHHHHHHCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCC YNLEELGTAQLLGMNLNPDKATTARRAAEERIDSTAFIGDAAKGFSGLVNSSTPTATQAP CCHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCHHEECCHHHHHHHCCCCCCCCCCCCC ADGTGSARTFASKTADQVLRDVNTQITGIATDTLGNELADTILLPYSIMLDLSQRRIDTV CCCCCCHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NQTTILEWVMQKNVYTLTTGAPLTVRGLFGYLETAGTGSSKRMVAYRRSPEVLKMHVPMP CHHHHHHHHHHCCEEEEECCCCEEHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEECCCC FRFLPAWQTGPIKFDVPGIFRVGGVDIRRPKAVRYLDGI EEEECCCCCCCEEECCCCEEEECCEECCCCCHHHHHCCC >Mature Secondary Structure GYQHRRCRPRCAAPRLTGAATMNAHIMQDAQQVAMSFLIRQASLIEPTVYAMRYQDIQY CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCC ANLIPVDTSAPEWIQSVTYFSMDSVGQAQWFNGNAHDVPKVELTREKFETTVSMAAIGYG CEEEECCCCCHHHHHHHHHHCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCC YNLEELGTAQLLGMNLNPDKATTARRAAEERIDSTAFIGDAAKGFSGLVNSSTPTATQAP CCHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCHHEECCHHHHHHHCCCCCCCCCCCCC ADGTGSARTFASKTADQVLRDVNTQITGIATDTLGNELADTILLPYSIMLDLSQRRIDTV CCCCCCHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NQTTILEWVMQKNVYTLTTGAPLTVRGLFGYLETAGTGSSKRMVAYRRSPEVLKMHVPMP CHHHHHHHHHHCCEEEEECCCCEEHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEECCCC FRFLPAWQTGPIKFDVPGIFRVGGVDIRRPKAVRYLDGI EEEECCCCCCCEEECCCCEEEECCEECCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA