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The map label for this gene is amaB [H]

Identifier: 13476575

GI number: 13476575

Start: 6553431

End: 6554663

Strand: Direct

Name: amaB [H]

Synonym: mlr7938

Alternate gene names: 13476575

Gene position: 6553431-6554663 (Clockwise)

Preceding gene: 13476574

Following gene: 13476576

Centisome position: 93.14

GC content: 68.53

Gene sequence:

>1233_bases
GTGATCGCGGTCGACGCGCAGCGCCTGCTTGGCCGAATCCGCGAACTCGGCGCCGTTGGCCGCGACGGGGAGGGCAGGCT
GACCCGGCTGGCGGCCTCCGACACCGACGGGTGGGGCCGCGACCTCTTCGTCGGCTGGCTGCGCCAGGCCGGTCTCGATG
TCGCCATCGACCGCATCGGCAACATTTTCGGCATCTGGCAAAATGCCGGCAATGCGGGCGAGGCGCCGCTGCTTATCGGC
TCGCATATCGACACCGTCATCGACGCCGGCATCTATGATGGCTGCTACGGCGTGCTTGCCGGGCTGGAGGTGATCGAGAC
GCTGAAGGCGTCCGGCCTCTCGCCGTCGCGCCCGCTTGCCGTCGCGGCCTTCACCAATGAGGAGGGCGTGCGCTTCTCTC
CCGACATGATGGGTTCGCTGGTCCATGCCGGCGGCGTCGATGTCGAGGCCGCGCTCGCCGCTGTCGGCACCGACGGCAGC
ACGCTCGGGCAGGAACTCGCTCGCATCGGCTATGCCGGCGAGCGCGAACCCGGCTTCCTCAAGCCGCACCTCTATCTCGA
ACTGCATATCGAGCAGGGACCGGTCCTGGAACGCGAAGGCATTCCGATCGGCGCGGTGGAAACCCTGCAAGGCATCTCCT
GGCAGCGCATCACCCTCGATGGCGTCGCCAACCATGCCGGCACCACGCCGATGTCGATGCGCTGCGACGCCGGATACGCC
GCGGCACGCGTGGTCACCTTCCTGCATGACCTTGCAGCGGCCTCCAACGCGCCGACCGTTGCCACCGTCGGCACGATGCG
CTTCGAGCCGAATGCCATCAATGTCATCCCATCGCGCGCCGTCTTCACGGTCGACCTGCGCGATCCTGACGAGCAGCGCC
TGCAGGCGCAGGAGGCGGCGCTGGCCGCCTTTCTGGAGCGACTTGCCGCCGAGGGCATCACCGTGTCGGTCGAGCGGCTG
GCCCGCTTCGAGCCGGTTGTCTTCGACGGGCGGGTCGTCGAACTGATCGAGGCCGCAGCCAGGAAGCGCGGGCTTGCCTC
GCGGCGCATGACCTCGGGCGCCGGCCATGACGCGCAGATGATCGCGCGCATCGCGCCGGCGGCGATGATCTTCGTGCCGA
GCGCCGGAGGCATCAGCCACAGCCCGCGCGAACACACCGAGGATGCCGAGCTTGTTGCCGGCGCCAACATCCTGCTTGAT
GTGGTCGCTGAACTCGCCGAGCTCGAAGGCTGA

Upstream 100 bases:

>100_bases
TCAACACCGAAGGTGCCACCGACCCGCATCGCTATGCCGAACTGGTCGGCTTGAGCCCGGCCGATGTGCTGGCCGGCAAG
CTCGCCGCCGAGGCAACATC

Downstream 100 bases:

>100_bases
AGAAATGGCTGAACTCGATCCAGAAATGCTGAAGCGCGAGATGACCGATTGGCGGCGCGACCTGCACGCGCACCCCGAAT
TCGGCTTCGAGGAGAAACGC

Product: allantoate amidohydrolase

Products: NA

Alternate protein names: L-carbamoylase [H]

Number of amino acids: Translated: 410; Mature: 410

Protein sequence:

>410_residues
MIAVDAQRLLGRIRELGAVGRDGEGRLTRLAASDTDGWGRDLFVGWLRQAGLDVAIDRIGNIFGIWQNAGNAGEAPLLIG
SHIDTVIDAGIYDGCYGVLAGLEVIETLKASGLSPSRPLAVAAFTNEEGVRFSPDMMGSLVHAGGVDVEAALAAVGTDGS
TLGQELARIGYAGEREPGFLKPHLYLELHIEQGPVLEREGIPIGAVETLQGISWQRITLDGVANHAGTTPMSMRCDAGYA
AARVVTFLHDLAAASNAPTVATVGTMRFEPNAINVIPSRAVFTVDLRDPDEQRLQAQEAALAAFLERLAAEGITVSVERL
ARFEPVVFDGRVVELIEAAARKRGLASRRMTSGAGHDAQMIARIAPAAMIFVPSAGGISHSPREHTEDAELVAGANILLD
VVAELAELEG

Sequences:

>Translated_410_residues
MIAVDAQRLLGRIRELGAVGRDGEGRLTRLAASDTDGWGRDLFVGWLRQAGLDVAIDRIGNIFGIWQNAGNAGEAPLLIG
SHIDTVIDAGIYDGCYGVLAGLEVIETLKASGLSPSRPLAVAAFTNEEGVRFSPDMMGSLVHAGGVDVEAALAAVGTDGS
TLGQELARIGYAGEREPGFLKPHLYLELHIEQGPVLEREGIPIGAVETLQGISWQRITLDGVANHAGTTPMSMRCDAGYA
AARVVTFLHDLAAASNAPTVATVGTMRFEPNAINVIPSRAVFTVDLRDPDEQRLQAQEAALAAFLERLAAEGITVSVERL
ARFEPVVFDGRVVELIEAAARKRGLASRRMTSGAGHDAQMIARIAPAAMIFVPSAGGISHSPREHTEDAELVAGANILLD
VVAELAELEG
>Mature_410_residues
MIAVDAQRLLGRIRELGAVGRDGEGRLTRLAASDTDGWGRDLFVGWLRQAGLDVAIDRIGNIFGIWQNAGNAGEAPLLIG
SHIDTVIDAGIYDGCYGVLAGLEVIETLKASGLSPSRPLAVAAFTNEEGVRFSPDMMGSLVHAGGVDVEAALAAVGTDGS
TLGQELARIGYAGEREPGFLKPHLYLELHIEQGPVLEREGIPIGAVETLQGISWQRITLDGVANHAGTTPMSMRCDAGYA
AARVVTFLHDLAAASNAPTVATVGTMRFEPNAINVIPSRAVFTVDLRDPDEQRLQAQEAALAAFLERLAAEGITVSVERL
ARFEPVVFDGRVVELIEAAARKRGLASRRMTSGAGHDAQMIARIAPAAMIFVPSAGGISHSPREHTEDAELVAGANILLD
VVAELAELEG

Specific function: Involved In The Anaerobic Utilization Of Allantoin. Converts Allantoate To (S)-Ureidoglycolate And Ammonia. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=399, Percent_Identity=34.0852130325814, Blast_Score=196, Evalue=3e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010158
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: =3.5.1.87 [H]

Molecular weight: Translated: 43232; Mature: 43232

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: PS00758 ARGE_DAPE_CPG2_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAVDAQRLLGRIRELGAVGRDGEGRLTRLAASDTDGWGRDLFVGWLRQAGLDVAIDRIG
CCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHC
NIFGIWQNAGNAGEAPLLIGSHIDTVIDAGIYDGCYGVLAGLEVIETLKASGLSPSRPLA
CEEEEECCCCCCCCCCEEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
VAAFTNEEGVRFSPDMMGSLVHAGGVDVEAALAAVGTDGSTLGQELARIGYAGEREPGFL
EEEEECCCCCEECHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCC
KPHLYLELHIEQGPVLEREGIPIGAVETLQGISWQRITLDGVANHAGTTPMSMRCDAGYA
CCEEEEEEEECCCCEECCCCCCCCHHHHHCCCCEEEEEECHHHCCCCCCCCEEECCCCHH
AARVVTFLHDLAAASNAPTVATVGTMRFEPNAINVIPSRAVFTVDLRDPDEQRLQAQEAA
HHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCEEEECCCEEEEEECCCCHHHHHHHHHHH
LAAFLERLAAEGITVSVERLARFEPVVFDGRVVELIEAAARKRGLASRRMTSGAGHDAQM
HHHHHHHHHHCCCEEEHHHHHHCCCEEECCHHHHHHHHHHHHCCCHHHHHCCCCCCHHHH
IARIAPAAMIFVPSAGGISHSPREHTEDAELVAGANILLDVVAELAELEG
HHHHCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIAVDAQRLLGRIRELGAVGRDGEGRLTRLAASDTDGWGRDLFVGWLRQAGLDVAIDRIG
CCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHC
NIFGIWQNAGNAGEAPLLIGSHIDTVIDAGIYDGCYGVLAGLEVIETLKASGLSPSRPLA
CEEEEECCCCCCCCCCEEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
VAAFTNEEGVRFSPDMMGSLVHAGGVDVEAALAAVGTDGSTLGQELARIGYAGEREPGFL
EEEEECCCCCEECHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCC
KPHLYLELHIEQGPVLEREGIPIGAVETLQGISWQRITLDGVANHAGTTPMSMRCDAGYA
CCEEEEEEEECCCCEECCCCCCCCHHHHHCCCCEEEEEECHHHCCCCCCCCEEECCCCHH
AARVVTFLHDLAAASNAPTVATVGTMRFEPNAINVIPSRAVFTVDLRDPDEQRLQAQEAA
HHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCEEEECCCEEEEEECCCCHHHHHHHHHHH
LAAFLERLAAEGITVSVERLARFEPVVFDGRVVELIEAAARKRGLASRRMTSGAGHDAQM
HHHHHHHHHHCCCEEEHHHHHHCCCEEECCHHHHHHHHHHHHCCCHHHHHCCCCCCHHHH
IARIAPAAMIFVPSAGGISHSPREHTEDAELVAGANILLDVVAELAELEG
HHHHCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023955; 8285691 [H]