| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is pgsA [H]
Identifier: 13476556
GI number: 13476556
Start: 6537666
End: 6538262
Strand: Direct
Name: pgsA [H]
Synonym: mlr7913
Alternate gene names: 13476556
Gene position: 6537666-6538262 (Clockwise)
Preceding gene: 13476555
Following gene: 13476557
Centisome position: 92.92
GC content: 62.14
Gene sequence:
>597_bases ATGGCCCAGCGCGCGTTCAACCTGCCCAACATGCTGACCTACGCCCGCATCATCGCGGTGCCGCTGGTGGTGCTGTGCTT TTTTCTCGAAGGTCATCTGAAATCGAGCGACTTCGCCCGCTGGTCGGCGCTGGTCATTTTCCTGCTGGCGTCCGTCACCG ATTATTTCGACGGCTATTTTGCGCGCGCCTGGCAGCAAACCTCCAACATCGGCAAGATGCTCGACCCGATCGCCGACAAG CTACTGGTCGCGACCTGCCTTTTGCTGCTGGCGGCCGACACCGATCGCCATGCCGGCATTGCCGGCTGGTCGCTGTGGGC GGCCATCATCATCCTGTGCCGCGAGATCCTGGTTTCTGGCCTGCGCGAATATCTGGCGGCGCTCAAGGTCTCGGTGCCGG TGACGCAGCTTGCCAAGTGGAAGACCACTATCCAGATGGTCGCCATCGCCTTCCTGCTGGCGGGACCGGCCGGCGACAAG ATCTTCCCGCTGACGACGCAGACCGGCCTCGTTTTGCTGTGGATAGCCGCACTCGTCACGCTCTACACCGGCTACGACTA TTTCCGCGCCGGCCTCAAGCACATCATGGACGAGTGA
Upstream 100 bases:
>100_bases TTGAAAATTCGGCACTTTCCGCTGGTCAGTCGAATCTGGCCTGTTGACCCCCTACATTGGCTTCTGATTTGAGTACGCAG GCAGAAAGAGTCCACCAGAC
Downstream 100 bases:
>100_bases AATGACGACCCGCCTCATCTATTTTGCCTGGGTGCGCGAACGGATCGGCACGTCAGAGGAAGACGTCGAATTGCCCGCCG ACATCGAGACCGTCGCCGAC
Product: CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylglycerophosphate synthase; PGP synthase [H]
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MAQRAFNLPNMLTYARIIAVPLVVLCFFLEGHLKSSDFARWSALVIFLLASVTDYFDGYFARAWQQTSNIGKMLDPIADK LLVATCLLLLAADTDRHAGIAGWSLWAAIIILCREILVSGLREYLAALKVSVPVTQLAKWKTTIQMVAIAFLLAGPAGDK IFPLTTQTGLVLLWIAALVTLYTGYDYFRAGLKHIMDE
Sequences:
>Translated_198_residues MAQRAFNLPNMLTYARIIAVPLVVLCFFLEGHLKSSDFARWSALVIFLLASVTDYFDGYFARAWQQTSNIGKMLDPIADK LLVATCLLLLAADTDRHAGIAGWSLWAAIIILCREILVSGLREYLAALKVSVPVTQLAKWKTTIQMVAIAFLLAGPAGDK IFPLTTQTGLVLLWIAALVTLYTGYDYFRAGLKHIMDE >Mature_197_residues AQRAFNLPNMLTYARIIAVPLVVLCFFLEGHLKSSDFARWSALVIFLLASVTDYFDGYFARAWQQTSNIGKMLDPIADKL LVATCLLLLAADTDRHAGIAGWSLWAAIIILCREILVSGLREYLAALKVSVPVTQLAKWKTTIQMVAIAFLLAGPAGDKI FPLTTQTGLVLLWIAALVTLYTGYDYFRAGLKHIMDE
Specific function: This protein catalyzes the committed step to the synthesis of the acidic phospholipids [H]
COG id: COG0558
COG function: function code I; Phosphatidylglycerophosphate synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Escherichia coli, GI1788220, Length=195, Percent_Identity=39.4871794871795, Blast_Score=120, Evalue=8e-29, Organism=Saccharomyces cerevisiae, GI6320059, Length=169, Percent_Identity=31.9526627218935, Blast_Score=68, Evalue=9e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000462 - InterPro: IPR004570 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.5 [H]
Molecular weight: Translated: 21927; Mature: 21796
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQRAFNLPNMLTYARIIAVPLVVLCFFLEGHLKSSDFARWSALVIFLLASVTDYFDGYF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH ARAWQQTSNIGKMLDPIADKLLVATCLLLLAADTDRHAGIAGWSLWAAIIILCREILVSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LREYLAALKVSVPVTQLAKWKTTIQMVAIAFLLAGPAGDKIFPLTTQTGLVLLWIAALVT HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHH LYTGYDYFRAGLKHIMDE HHCCHHHHHHHHHHHHCC >Mature Secondary Structure AQRAFNLPNMLTYARIIAVPLVVLCFFLEGHLKSSDFARWSALVIFLLASVTDYFDGYF CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH ARAWQQTSNIGKMLDPIADKLLVATCLLLLAADTDRHAGIAGWSLWAAIIILCREILVSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LREYLAALKVSVPVTQLAKWKTTIQMVAIAFLLAGPAGDKIFPLTTQTGLVLLWIAALVT HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHH LYTGYDYFRAGLKHIMDE HHCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA