Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13476544

Identifier: 13476544

GI number: 13476544

Start: 6527031

End: 6527393

Strand: Direct

Name: 13476544

Synonym: mlr7893

Alternate gene names: NA

Gene position: 6527031-6527393 (Clockwise)

Preceding gene: 13476543

Following gene: 13476545

Centisome position: 92.77

GC content: 62.81

Gene sequence:

>363_bases
ATGCTCGCTCAAGCGGTTCAGGCGCTGGGCGCGCTTCTGATCGGCGGCGTGTTTGTATGGGCCGGCGTCGAACATTTCGT
GAAGTTCAAGCCAATGACCGAGTATCTGGCTGCCCGGCAATTTCCGGCTCCGGCCTTCCTGCTCGCCGCGGGCTCAGCAT
TGGAGATCGTCGCCGGGTTGCTGGTTGCCGTGGGCATTGCGGTGCCTTTCGCCGCCGGCGCGCTGGTCGTGTTTACGCTG
GCGGTGAACATGCTCCTGCTGCGGTTCTGGGCCTGTGAGGGCCTGGAACGGCAGACGTTGCGATCAGCCTTTCTGGTCAA
CTTCGCCGTTATTGGCGGATTGCTGCTTGCGGCAACCGTCTAG

Upstream 100 bases:

>100_bases
CTATTTCCAGGATCCGGATGACCATCTCTGGGAAGTCGTCTTCAACCCTGCCTTTCTTCCCGAGGACTGAACCCTGCAGG
CATCTGGTGGGAGGGTTGGC

Downstream 100 bases:

>100_bases
TCTCGTTCTGGAAACCATTGTTTCGGCAACCGCTTGACCGCCGCCAAGCGAATCCGCACAGTGCGCGCAATCGACCTTGA
GAGGCTGCCATGACTCGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MLAQAVQALGALLIGGVFVWAGVEHFVKFKPMTEYLAARQFPAPAFLLAAGSALEIVAGLLVAVGIAVPFAAGALVVFTL
AVNMLLLRFWACEGLERQTLRSAFLVNFAVIGGLLLAATV

Sequences:

>Translated_120_residues
MLAQAVQALGALLIGGVFVWAGVEHFVKFKPMTEYLAARQFPAPAFLLAAGSALEIVAGLLVAVGIAVPFAAGALVVFTL
AVNMLLLRFWACEGLERQTLRSAFLVNFAVIGGLLLAATV
>Mature_120_residues
MLAQAVQALGALLIGGVFVWAGVEHFVKFKPMTEYLAARQFPAPAFLLAAGSALEIVAGLLVAVGIAVPFAAGALVVFTL
AVNMLLLRFWACEGLERQTLRSAFLVNFAVIGGLLLAATV

Specific function: Unknown

COG id: COG2259

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12543; Mature: 12543

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAQAVQALGALLIGGVFVWAGVEHFVKFKPMTEYLAARQFPAPAFLLAAGSALEIVAGL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHCCCHHHHHHHH
LVAVGIAVPFAAGALVVFTLAVNMLLLRFWACEGLERQTLRSAFLVNFAVIGGLLLAATV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLAQAVQALGALLIGGVFVWAGVEHFVKFKPMTEYLAARQFPAPAFLLAAGSALEIVAGL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHCCCHHHHHHHH
LVAVGIAVPFAAGALVVFTLAVNMLLLRFWACEGLERQTLRSAFLVNFAVIGGLLLAATV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA