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The map label for this gene is 13476539

Identifier: 13476539

GI number: 13476539

Start: 6523353

End: 6524030

Strand: Direct

Name: 13476539

Synonym: mlr7883

Alternate gene names: NA

Gene position: 6523353-6524030 (Clockwise)

Preceding gene: 13476534

Following gene: 13476540

Centisome position: 92.71

GC content: 60.62

Gene sequence:

>678_bases
ATGGACACGTCAATCAAAAAAAAGCGAGTGCGCGGGCGCTTGTCGCGCGAAATGATCGAGGACGCGGCCTTCGAGGTGAT
CGAGAAGGAGGGGCTCGCTGGCTTTTCAATGCGCAAGCTAGCGGCGGCGCTCGGCTGCGAGGCGATGAGCATCTATCACC
ATTTTCCTTCGGTGGCGCATTTGCACGAAGCGCTGGTCGACCGGCTGGTCGGTGCGCTGGAAATGCCCGACGCCAGCCTT
CCATGGCGGCAAAGAATGCGTATCGCCATCGAGGATTTTCGCAGCATCGGCCGCGACCATCCCGCCTATGCCACTTTCTT
TGTCACCTACCGGATGAACTCGCCGATCTGCCTTGCATGGCTGAACGGCATTCTGAGCCTGTTCAGGGATGGCGGCTTTG
ACACCGAACTCAGCGCGCGGCTGTTTCGCGCCGTCGGCTATTATCTGATGGGCGCGGTGTTGGATGAGAATGCGGGCTAT
GCCAAGGGTCCGTCGGCGGTGAACACGGTCAGCGACGAGCAACTGGCCCGGGATTTTCCCAATGTCATGGCCGCCGGGCG
CTTTTTCGGTACCGCCGAATTCGACAAGACATTCGAGCTCGGCCTCGACATGCTGCTGGACGAAATGGAACGCCTGCGCG
ACGGTGCCGACGCTGGCCAGTTGTCCGGCAAGGTGTGA

Upstream 100 bases:

>100_bases
GCGATAATTAGACATGACATTCTCCTCTGGTCTTTGTTAGCCTTACGATGTAAGGTGGTGCGGAAAGTGAACCTTACAGT
GTAAGTTGTCAAGCGGCGCA

Downstream 100 bases:

>100_bases
TGACGAGGTGGCTGTCTGAATGCGCTTTCTGTTTGTCCTGATCCTGCTGGCCGGCACCGGCATCGGCCTCATATATCCCT
GGGCGATGACCAATTTTTCC

Product: transcription regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator TetR Family Protein; TetR Family Transcriptional Regulatory Protein; Regulatory Protein; TetR-Family Transcriptional Regulator; Transcription Regulator

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MDTSIKKKRVRGRLSREMIEDAAFEVIEKEGLAGFSMRKLAAALGCEAMSIYHHFPSVAHLHEALVDRLVGALEMPDASL
PWRQRMRIAIEDFRSIGRDHPAYATFFVTYRMNSPICLAWLNGILSLFRDGGFDTELSARLFRAVGYYLMGAVLDENAGY
AKGPSAVNTVSDEQLARDFPNVMAAGRFFGTAEFDKTFELGLDMLLDEMERLRDGADAGQLSGKV

Sequences:

>Translated_225_residues
MDTSIKKKRVRGRLSREMIEDAAFEVIEKEGLAGFSMRKLAAALGCEAMSIYHHFPSVAHLHEALVDRLVGALEMPDASL
PWRQRMRIAIEDFRSIGRDHPAYATFFVTYRMNSPICLAWLNGILSLFRDGGFDTELSARLFRAVGYYLMGAVLDENAGY
AKGPSAVNTVSDEQLARDFPNVMAAGRFFGTAEFDKTFELGLDMLLDEMERLRDGADAGQLSGKV
>Mature_225_residues
MDTSIKKKRVRGRLSREMIEDAAFEVIEKEGLAGFSMRKLAAALGCEAMSIYHHFPSVAHLHEALVDRLVGALEMPDASL
PWRQRMRIAIEDFRSIGRDHPAYATFFVTYRMNSPICLAWLNGILSLFRDGGFDTELSARLFRAVGYYLMGAVLDENAGY
AKGPSAVNTVSDEQLARDFPNVMAAGRFFGTAEFDKTFELGLDMLLDEMERLRDGADAGQLSGKV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25067; Mature: 25067

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTSIKKKRVRGRLSREMIEDAAFEVIEKEGLAGFSMRKLAAALGCEAMSIYHHFPSVAH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHH
LHEALVDRLVGALEMPDASLPWRQRMRIAIEDFRSIGRDHPAYATFFVTYRMNSPICLAW
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCHHHHH
LNGILSLFRDGGFDTELSARLFRAVGYYLMGAVLDENAGYAKGPSAVNTVSDEQLARDFP
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHH
NVMAAGRFFGTAEFDKTFELGLDMLLDEMERLRDGADAGQLSGKV
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MDTSIKKKRVRGRLSREMIEDAAFEVIEKEGLAGFSMRKLAAALGCEAMSIYHHFPSVAH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHH
LHEALVDRLVGALEMPDASLPWRQRMRIAIEDFRSIGRDHPAYATFFVTYRMNSPICLAW
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCHHHHH
LNGILSLFRDGGFDTELSARLFRAVGYYLMGAVLDENAGYAKGPSAVNTVSDEQLARDFP
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHH
NVMAAGRFFGTAEFDKTFELGLDMLLDEMERLRDGADAGQLSGKV
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA