| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13476472
Identifier: 13476472
GI number: 13476472
Start: 6454949
End: 6455440
Strand: Direct
Name: 13476472
Synonym: mlr7801
Alternate gene names: NA
Gene position: 6454949-6455440 (Clockwise)
Preceding gene: 13476471
Following gene: 13476473
Centisome position: 91.74
GC content: 64.02
Gene sequence:
>492_bases ATGAGCCTCGACAACCGGCCGACCTACACCGGCGGCTGCCAATGCGGCGCGGTGCGCTTTCGTGTCGAGGGTGCGCTTGG CGACGCTTCGATCTGCCATTGCCGCATGTGCCAGAAGGCGTTCGGCTCGTTCTACGCGCCGCTGGTATCGGTGCGCGGCG CCAGGCTCGACTGGACGCGCGGCGAGCCGAAATACTTCCGCTCTTCCAGCCATGTCGACCGCGGCTTTTGCGCCGATTGC GGCACGCCGCTGACCTTCACCGCGCCGGATGGTGTCGGTCTCGCCATCGGTGCGTTCGACAATCCGGCGGAGATCGTACC GCTGATCCAGTGGGGTACCGAGGCAAAATTGCCCTATGTCGACACGATCCCGCAATTGCCGGGCGAGGAGACGATGGCCG ACATATCGTCGGCCCCCTATCTTGCCGATCTCGTCTCCTACCAGCATCCGGACCACGACACCGAACAATGGCCGCCGAAG GAAAGATCATGA
Upstream 100 bases:
>100_bases CCTGCGCCCGCACTATCACGCCAACTATTACGCCGCCTTCGTCTTCGACCCCGACGGCAACAATGTCGAGGCCGTCTGCC ATGCCTCGGAGTGACCAGCG
Downstream 100 bases:
>100_bases CCGAAACAATACGAACCGGCGGCTGCCAGTGCGGCGCGGTGCGCTTTCGCATCAAGGGGGCGCTCGGCCGTCCGTCGATC TGCCATTGCCGCATGTGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: Glutathione-Dependent Formaldehyde-Activating Protein; Glutathione-Dependent Formaldehyde-Activating; Glutathione-Dependent Formaldehyde-Activating Protein GFA; Glutathione-Dependent Formaldehyde-Activating Family; Glutathione-Dependent Formaldehyde-Activating Gfa
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MSLDNRPTYTGGCQCGAVRFRVEGALGDASICHCRMCQKAFGSFYAPLVSVRGARLDWTRGEPKYFRSSSHVDRGFCADC GTPLTFTAPDGVGLAIGAFDNPAEIVPLIQWGTEAKLPYVDTIPQLPGEETMADISSAPYLADLVSYQHPDHDTEQWPPK ERS
Sequences:
>Translated_163_residues MSLDNRPTYTGGCQCGAVRFRVEGALGDASICHCRMCQKAFGSFYAPLVSVRGARLDWTRGEPKYFRSSSHVDRGFCADC GTPLTFTAPDGVGLAIGAFDNPAEIVPLIQWGTEAKLPYVDTIPQLPGEETMADISSAPYLADLVSYQHPDHDTEQWPPK ERS >Mature_162_residues SLDNRPTYTGGCQCGAVRFRVEGALGDASICHCRMCQKAFGSFYAPLVSVRGARLDWTRGEPKYFRSSSHVDRGFCADCG TPLTFTAPDGVGLAIGAFDNPAEIVPLIQWGTEAKLPYVDTIPQLPGEETMADISSAPYLADLVSYQHPDHDTEQWPPKE RS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17802; Mature: 17671
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLDNRPTYTGGCQCGAVRFRVEGALGDASICHCRMCQKAFGSFYAPLVSVRGARLDWTR CCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCC GEPKYFRSSSHVDRGFCADCGTPLTFTAPDGVGLAIGAFDNPAEIVPLIQWGTEAKLPYV CCCHHHCCCCCCCCCEECCCCCCEEEECCCCCEEEEECCCCCCCEEEEEECCCCCCCCCC DTIPQLPGEETMADISSAPYLADLVSYQHPDHDTEQWPPKERS CCCCCCCCHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure SLDNRPTYTGGCQCGAVRFRVEGALGDASICHCRMCQKAFGSFYAPLVSVRGARLDWTR CCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCC GEPKYFRSSSHVDRGFCADCGTPLTFTAPDGVGLAIGAFDNPAEIVPLIQWGTEAKLPYV CCCHHHCCCCCCCCCEECCCCCCEEEECCCCCEEEEECCCCCCCEEEEEECCCCCCCCCC DTIPQLPGEETMADISSAPYLADLVSYQHPDHDTEQWPPKERS CCCCCCCCHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA