Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13476397

Identifier: 13476397

GI number: 13476397

Start: 6384009

End: 6384884

Strand: Reverse

Name: 13476397

Synonym: mll7705

Alternate gene names: NA

Gene position: 6384884-6384009 (Counterclockwise)

Preceding gene: 13476398

Following gene: 13476396

Centisome position: 90.75

GC content: 68.15

Gene sequence:

>876_bases
ATGACCGCCGCCTCCCCCAACAGCCCGACCGATATTGCCGACATCCTGGCCTTCTATGCCAGCGCCGGCGTCGACGAGGC
GCTGGAAGACGCTCCGGTGAACCGCTTCGCCGAGGCGGCGCCGAGACCTGTCGAGCGCGCGCCGGCGCCGGTGGCGCCAC
CTCGCGAAGAGAAGGCACCGGAGCGGCCAGCGGCACCGCCCGGACTGGATGCAAGCAAGGTTCCGGATGCGCCACCGGCG
CGTTCATCGGTCGCCGCCGTGCCAGACGAGGCTCAGGCGGCGCTTGCGCGCCAGTTGGCGACAACCGCAACGACCCTGGA
CGAGTTGCGCCAGCACATGGCTGCCTTCGACGGCTGCAATCTCAAGGCCACCGCCAAGAACCTGGTCTTCGCCGATGGAA
ACCCGGACGCCGCGGTGATGCTGGTGGGCGAAGCGCCGGGCCGCGACGAGGATATTGAGGGGCTGCCCTTCGTCGGCCGC
TCGGGCCGGCTGCTCGATCGCATGCTGGCCGCGATCGGGCTCGACCGCACTTCGGTCTACATCGCCAACGTCATTCCGTG
GCGGCCGCCGGGCAACCGCACGCCGACGCCGCATGAGACCGAGATCTGCCGGCCGTTCATCGAGCGGCAGATCGAACTGG
TCAATCCCAAGGTGCTGGTCAATCTCGGCGGACCGTCGGCCAAGACCTTGCTCAACACCTCGGAAGGTATTTTGCGGCTG
CGCGGCAACTGGCGTGTCCACACCACCGCCTCGGGCATCGCCATTCCGGCCATGCCGACGCTGCATCCGGCCTATCTCCT
GCGAACGCCCGCGCACAAGAAGCTGGCATGGCGGGATTTTCTCGAGGTCAAGGCGAAGCTGCGGGCGCTCTCCTAG

Upstream 100 bases:

>100_bases
GCGATGGACCTTCTATCTGGTGCAAGACCCGCGCATTCCGACGGGATAGGGAAAGCCGCCGGTCTTGCAAATTTCGGCCA
TGGGGACGAATGTGCGCGCC

Downstream 100 bases:

>100_bases
CGATAACCTTGGAGGTAATTGAAATCCCTCTGCCGCCGCCTTAATCCTGCCCCATGACAACAGCCCAAACCTCCGCCGGC
AGTCTCATCCGCGAATGGCG

Product: hypothetical protein

Products: diphosphate; DNAn+1

Alternate protein names: Uracil-DNA Glycosylase; Phage SPO1 DNA Polymerase-Like Protein; DNA Polymerase; Uracil DNA Glycosylase Superfamily Protein; DNA Polymerase-Related Protein; DNA Glycosylase; Uracil-DNA Glycosylase Family 4 Protein; DNA-Directed DNA Polymerase; Bacteriophage-Related DNA Polymerase; DNA Polymerase Bacteriophage-Type; N-Terminus Of Bacteriophage-Type DNA Polymerase; Phage Spo1 DNA Polymerase-Related Protein; Phage DNA Polymerase; Uracil-DNA Glycosylase C-Terminal Domain Protein; Bacteriophage-Type DNA Polymerase N-Terminal Domain Protein; DNA Polymerase Bacteriophage-Type Protein; Phage SPO1 DNA Polymerase Domain-Containing Protein; DNA Polymerase Domain-Containing Protein; DNA Polymerase-Related Protein Bacteriophage-Type; Uracil-DNA Glycosylase C-Terminal; Phage SpO1 DNA Polymerase-Related Protein; Bacteriophage-Type DNA Polymerase; DNA Polymerase Related Protein; Uracil-DNA Glycosylase Phage-Related Protein; Phage Shock Protein E; Phage Spo1 DNA Polymerase Domain Protein; Uracil-DNA Glycosylase-Like Protein; Uracil-DNA Glycosylase-Related Protein

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MTAASPNSPTDIADILAFYASAGVDEALEDAPVNRFAEAAPRPVERAPAPVAPPREEKAPERPAAPPGLDASKVPDAPPA
RSSVAAVPDEAQAALARQLATTATTLDELRQHMAAFDGCNLKATAKNLVFADGNPDAAVMLVGEAPGRDEDIEGLPFVGR
SGRLLDRMLAAIGLDRTSVYIANVIPWRPPGNRTPTPHETEICRPFIERQIELVNPKVLVNLGGPSAKTLLNTSEGILRL
RGNWRVHTTASGIAIPAMPTLHPAYLLRTPAHKKLAWRDFLEVKAKLRALS

Sequences:

>Translated_291_residues
MTAASPNSPTDIADILAFYASAGVDEALEDAPVNRFAEAAPRPVERAPAPVAPPREEKAPERPAAPPGLDASKVPDAPPA
RSSVAAVPDEAQAALARQLATTATTLDELRQHMAAFDGCNLKATAKNLVFADGNPDAAVMLVGEAPGRDEDIEGLPFVGR
SGRLLDRMLAAIGLDRTSVYIANVIPWRPPGNRTPTPHETEICRPFIERQIELVNPKVLVNLGGPSAKTLLNTSEGILRL
RGNWRVHTTASGIAIPAMPTLHPAYLLRTPAHKKLAWRDFLEVKAKLRALS
>Mature_290_residues
TAASPNSPTDIADILAFYASAGVDEALEDAPVNRFAEAAPRPVERAPAPVAPPREEKAPERPAAPPGLDASKVPDAPPAR
SSVAAVPDEAQAALARQLATTATTLDELRQHMAAFDGCNLKATAKNLVFADGNPDAAVMLVGEAPGRDEDIEGLPFVGRS
GRLLDRMLAAIGLDRTSVYIANVIPWRPPGNRTPTPHETEICRPFIERQIELVNPKVLVNLGGPSAKTLLNTSEGILRLR
GNWRVHTTASGIAIPAMPTLHPAYLLRTPAHKKLAWRDFLEVKAKLRALS

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 31072; Mature: 30941

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAASPNSPTDIADILAFYASAGVDEALEDAPVNRFAEAAPRPVERAPAPVAPPREEKAP
CCCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHCCCCHHHCCCCCCCCCHHCCC
ERPAAPPGLDASKVPDAPPARSSVAAVPDEAQAALARQLATTATTLDELRQHMAAFDGCN
CCCCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LKATAKNLVFADGNPDAAVMLVGEAPGRDEDIEGLPFVGRSGRLLDRMLAAIGLDRTSVY
CEEECCEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEE
IANVIPWRPPGNRTPTPHETEICRPFIERQIELVNPKVLVNLGGPSAKTLLNTSEGILRL
EEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHCCCCCEEEE
RGNWRVHTTASGIAIPAMPTLHPAYLLRTPAHKKLAWRDFLEVKAKLRALS
ECCEEEEEECCCEEECCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TAASPNSPTDIADILAFYASAGVDEALEDAPVNRFAEAAPRPVERAPAPVAPPREEKAP
CCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHCCCCHHHCCCCCCCCCHHCCC
ERPAAPPGLDASKVPDAPPARSSVAAVPDEAQAALARQLATTATTLDELRQHMAAFDGCN
CCCCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LKATAKNLVFADGNPDAAVMLVGEAPGRDEDIEGLPFVGRSGRLLDRMLAAIGLDRTSVY
CEEECCEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEE
IANVIPWRPPGNRTPTPHETEICRPFIERQIELVNPKVLVNLGGPSAKTLLNTSEGILRL
EEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHCCCCCEEEE
RGNWRVHTTASGIAIPAMPTLHPAYLLRTPAHKKLAWRDFLEVKAKLRALS
ECCEEEEEECCCEEECCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA