| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13476396
Identifier: 13476396
GI number: 13476396
Start: 6383143
End: 6383955
Strand: Reverse
Name: 13476396
Synonym: mll7704
Alternate gene names: NA
Gene position: 6383955-6383143 (Counterclockwise)
Preceding gene: 13476397
Following gene: 13476393
Centisome position: 90.73
GC content: 65.44
Gene sequence:
>813_bases ATGACAACAGCCCAAACCTCCGCCGGCAGTCTCATCCGCGAATGGCGCACGCGCCGCCGCATGAGCCAGCTCGATCTCGC CATGGAGGCCGAGATTTCGCAGCGGCATCTGTCCTTCGTCGAGAGCGGGCGGGCCGCGCCGTCGCGCGATATGGTGCTGC ATCTGGCCGAGCAGCTTTCGATCCCGCTGAGGCAACGCAACCAGCTGCTGCTGGCCGCCGGCTTCGCACCGAGCTTCAGC GAACGGCCGCTGACCGACACGACGCTGGCACCGGCGATGGCGGCGGTCGAGATCGTGCTCAAGGGGCATGAGCCGTTTCC AGCGCTGGCGGTGGACCGGCACTGGAACCTGGTTTCGGCGAATGCCGCGATTGCTCCCTTCCTTGCCGATCTCAGCGAGG CTTCGCTGCTGACGCCGCCGGTCAACGTGCTTCGCCTTTCCCTGCATCCCGGCGGCATCGCGCCGCGCATCGTCAATCTC CAGGAATGGCGCACGCATCTGCTCGAACGCCTCAAACACCAGAACGATGCCAGCGGCGATCCGGTGCTGGTCGAATTGGA GCGGGAGTTGCGCAGCTATCCTTCCGGGCTGAAGGGCAGCAGGCCAACACCCGTCGAGCCGAACGCCATCGTGCATCCGC TGCGCCTCGCCCATGGCGACCAGGTGCTGTCATTCATCAGCACCATCACCGTGTTCGGCACGCCGCTTGACGTGACCTTG TCGGAACTGGCGATCGAATCCTTCTTCCCTGCCGACGAGCAGACTCGCGCGGTTCTGGTGCGGCTGGCAAAGGAGCGCAG CGAACGGTCGTAA
Upstream 100 bases:
>100_bases GGCGGGATTTTCTCGAGGTCAAGGCGAAGCTGCGGGCGCTCTCCTAGCGATAACCTTGGAGGTAATTGAAATCCCTCTGC CGCCGCCTTAATCCTGCCCC
Downstream 100 bases:
>100_bases CTGAGGAGATCGGCCCTTCGCCATCGCTCCCCAGCCCTCCGGGCGTTCGTCGTTCGGAAAGCCAAGCAATTGGCTTTCCG TCCGCTACGCGGACCTCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator XRE Family; Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Helix-Turn-Helix Domain Protein; Xre Family xin-Antitoxin System Antitoxin Component; Helix-Turn-Helix Transcriptional Regulatory Protein; Xin-Antitoxin System Antitoxin Component Xre Family; HTH-Type Transcriptional Regulator; Transcriptional Regulator XRE Family Protein; Cro/CI Family Transcriptional Regulator; Transcriptional Regulator Xre Family
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MTTAQTSAGSLIREWRTRRRMSQLDLAMEAEISQRHLSFVESGRAAPSRDMVLHLAEQLSIPLRQRNQLLLAAGFAPSFS ERPLTDTTLAPAMAAVEIVLKGHEPFPALAVDRHWNLVSANAAIAPFLADLSEASLLTPPVNVLRLSLHPGGIAPRIVNL QEWRTHLLERLKHQNDASGDPVLVELERELRSYPSGLKGSRPTPVEPNAIVHPLRLAHGDQVLSFISTITVFGTPLDVTL SELAIESFFPADEQTRAVLVRLAKERSERS
Sequences:
>Translated_270_residues MTTAQTSAGSLIREWRTRRRMSQLDLAMEAEISQRHLSFVESGRAAPSRDMVLHLAEQLSIPLRQRNQLLLAAGFAPSFS ERPLTDTTLAPAMAAVEIVLKGHEPFPALAVDRHWNLVSANAAIAPFLADLSEASLLTPPVNVLRLSLHPGGIAPRIVNL QEWRTHLLERLKHQNDASGDPVLVELERELRSYPSGLKGSRPTPVEPNAIVHPLRLAHGDQVLSFISTITVFGTPLDVTL SELAIESFFPADEQTRAVLVRLAKERSERS >Mature_269_residues TTAQTSAGSLIREWRTRRRMSQLDLAMEAEISQRHLSFVESGRAAPSRDMVLHLAEQLSIPLRQRNQLLLAAGFAPSFSE RPLTDTTLAPAMAAVEIVLKGHEPFPALAVDRHWNLVSANAAIAPFLADLSEASLLTPPVNVLRLSLHPGGIAPRIVNLQ EWRTHLLERLKHQNDASGDPVLVELERELRSYPSGLKGSRPTPVEPNAIVHPLRLAHGDQVLSFISTITVFGTPLDVTLS ELAIESFFPADEQTRAVLVRLAKERSERS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29781; Mature: 29649
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTAQTSAGSLIREWRTRRRMSQLDLAMEAEISQRHLSFVESGRAAPSRDMVLHLAEQLS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHC IPLRQRNQLLLAAGFAPSFSERPLTDTTLAPAMAAVEIVLKGHEPFPALAVDRHWNLVSA CCHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCEEEC NAAIAPFLADLSEASLLTPPVNVLRLSLHPGGIAPRIVNLQEWRTHLLERLKHQNDASGD CHHHHHHHHHHHHCCCCCCCHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC PVLVELERELRSYPSGLKGSRPTPVEPNAIVHPLRLAHGDQVLSFISTITVFGTPLDVTL CEEEEEHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH SELAIESFFPADEQTRAVLVRLAKERSERS HHHHHHHHCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TTAQTSAGSLIREWRTRRRMSQLDLAMEAEISQRHLSFVESGRAAPSRDMVLHLAEQLS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHC IPLRQRNQLLLAAGFAPSFSERPLTDTTLAPAMAAVEIVLKGHEPFPALAVDRHWNLVSA CCHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCEEEC NAAIAPFLADLSEASLLTPPVNVLRLSLHPGGIAPRIVNLQEWRTHLLERLKHQNDASGD CHHHHHHHHHHHHCCCCCCCHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC PVLVELERELRSYPSGLKGSRPTPVEPNAIVHPLRLAHGDQVLSFISTITVFGTPLDVTL CEEEEEHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH SELAIESFFPADEQTRAVLVRLAKERSERS HHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA