Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13476396

Identifier: 13476396

GI number: 13476396

Start: 6383143

End: 6383955

Strand: Reverse

Name: 13476396

Synonym: mll7704

Alternate gene names: NA

Gene position: 6383955-6383143 (Counterclockwise)

Preceding gene: 13476397

Following gene: 13476393

Centisome position: 90.73

GC content: 65.44

Gene sequence:

>813_bases
ATGACAACAGCCCAAACCTCCGCCGGCAGTCTCATCCGCGAATGGCGCACGCGCCGCCGCATGAGCCAGCTCGATCTCGC
CATGGAGGCCGAGATTTCGCAGCGGCATCTGTCCTTCGTCGAGAGCGGGCGGGCCGCGCCGTCGCGCGATATGGTGCTGC
ATCTGGCCGAGCAGCTTTCGATCCCGCTGAGGCAACGCAACCAGCTGCTGCTGGCCGCCGGCTTCGCACCGAGCTTCAGC
GAACGGCCGCTGACCGACACGACGCTGGCACCGGCGATGGCGGCGGTCGAGATCGTGCTCAAGGGGCATGAGCCGTTTCC
AGCGCTGGCGGTGGACCGGCACTGGAACCTGGTTTCGGCGAATGCCGCGATTGCTCCCTTCCTTGCCGATCTCAGCGAGG
CTTCGCTGCTGACGCCGCCGGTCAACGTGCTTCGCCTTTCCCTGCATCCCGGCGGCATCGCGCCGCGCATCGTCAATCTC
CAGGAATGGCGCACGCATCTGCTCGAACGCCTCAAACACCAGAACGATGCCAGCGGCGATCCGGTGCTGGTCGAATTGGA
GCGGGAGTTGCGCAGCTATCCTTCCGGGCTGAAGGGCAGCAGGCCAACACCCGTCGAGCCGAACGCCATCGTGCATCCGC
TGCGCCTCGCCCATGGCGACCAGGTGCTGTCATTCATCAGCACCATCACCGTGTTCGGCACGCCGCTTGACGTGACCTTG
TCGGAACTGGCGATCGAATCCTTCTTCCCTGCCGACGAGCAGACTCGCGCGGTTCTGGTGCGGCTGGCAAAGGAGCGCAG
CGAACGGTCGTAA

Upstream 100 bases:

>100_bases
GGCGGGATTTTCTCGAGGTCAAGGCGAAGCTGCGGGCGCTCTCCTAGCGATAACCTTGGAGGTAATTGAAATCCCTCTGC
CGCCGCCTTAATCCTGCCCC

Downstream 100 bases:

>100_bases
CTGAGGAGATCGGCCCTTCGCCATCGCTCCCCAGCCCTCCGGGCGTTCGTCGTTCGGAAAGCCAAGCAATTGGCTTTCCG
TCCGCTACGCGGACCTCTCC

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator XRE Family; Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Helix-Turn-Helix Domain Protein; Xre Family xin-Antitoxin System Antitoxin Component; Helix-Turn-Helix Transcriptional Regulatory Protein; Xin-Antitoxin System Antitoxin Component Xre Family; HTH-Type Transcriptional Regulator; Transcriptional Regulator XRE Family Protein; Cro/CI Family Transcriptional Regulator; Transcriptional Regulator Xre Family

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MTTAQTSAGSLIREWRTRRRMSQLDLAMEAEISQRHLSFVESGRAAPSRDMVLHLAEQLSIPLRQRNQLLLAAGFAPSFS
ERPLTDTTLAPAMAAVEIVLKGHEPFPALAVDRHWNLVSANAAIAPFLADLSEASLLTPPVNVLRLSLHPGGIAPRIVNL
QEWRTHLLERLKHQNDASGDPVLVELERELRSYPSGLKGSRPTPVEPNAIVHPLRLAHGDQVLSFISTITVFGTPLDVTL
SELAIESFFPADEQTRAVLVRLAKERSERS

Sequences:

>Translated_270_residues
MTTAQTSAGSLIREWRTRRRMSQLDLAMEAEISQRHLSFVESGRAAPSRDMVLHLAEQLSIPLRQRNQLLLAAGFAPSFS
ERPLTDTTLAPAMAAVEIVLKGHEPFPALAVDRHWNLVSANAAIAPFLADLSEASLLTPPVNVLRLSLHPGGIAPRIVNL
QEWRTHLLERLKHQNDASGDPVLVELERELRSYPSGLKGSRPTPVEPNAIVHPLRLAHGDQVLSFISTITVFGTPLDVTL
SELAIESFFPADEQTRAVLVRLAKERSERS
>Mature_269_residues
TTAQTSAGSLIREWRTRRRMSQLDLAMEAEISQRHLSFVESGRAAPSRDMVLHLAEQLSIPLRQRNQLLLAAGFAPSFSE
RPLTDTTLAPAMAAVEIVLKGHEPFPALAVDRHWNLVSANAAIAPFLADLSEASLLTPPVNVLRLSLHPGGIAPRIVNLQ
EWRTHLLERLKHQNDASGDPVLVELERELRSYPSGLKGSRPTPVEPNAIVHPLRLAHGDQVLSFISTITVFGTPLDVTLS
ELAIESFFPADEQTRAVLVRLAKERSERS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29781; Mature: 29649

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTAQTSAGSLIREWRTRRRMSQLDLAMEAEISQRHLSFVESGRAAPSRDMVLHLAEQLS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHC
IPLRQRNQLLLAAGFAPSFSERPLTDTTLAPAMAAVEIVLKGHEPFPALAVDRHWNLVSA
CCHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCEEEC
NAAIAPFLADLSEASLLTPPVNVLRLSLHPGGIAPRIVNLQEWRTHLLERLKHQNDASGD
CHHHHHHHHHHHHCCCCCCCHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
PVLVELERELRSYPSGLKGSRPTPVEPNAIVHPLRLAHGDQVLSFISTITVFGTPLDVTL
CEEEEEHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
SELAIESFFPADEQTRAVLVRLAKERSERS
HHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TTAQTSAGSLIREWRTRRRMSQLDLAMEAEISQRHLSFVESGRAAPSRDMVLHLAEQLS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHC
IPLRQRNQLLLAAGFAPSFSERPLTDTTLAPAMAAVEIVLKGHEPFPALAVDRHWNLVSA
CCHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCEEEC
NAAIAPFLADLSEASLLTPPVNVLRLSLHPGGIAPRIVNLQEWRTHLLERLKHQNDASGD
CHHHHHHHHHHHHCCCCCCCHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
PVLVELERELRSYPSGLKGSRPTPVEPNAIVHPLRLAHGDQVLSFISTITVFGTPLDVTL
CEEEEEHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
SELAIESFFPADEQTRAVLVRLAKERSERS
HHHHHHHHCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA