Click here to switch to the map view.

The map label for this gene is rbsK [H]

Identifier: 13476364

GI number: 13476364

Start: 6343978

End: 6344889

Strand: Reverse

Name: rbsK [H]

Synonym: mll7662

Alternate gene names: 13476364

Gene position: 6344889-6343978 (Counterclockwise)

Preceding gene: 13476365

Following gene: 13476363

Centisome position: 90.18

GC content: 66.89

Gene sequence:

>912_bases
ATGCGCGTCCATGTCGTCGGCAATGTCTGCGTCGATACGACGTTTCAGCTGGGCCGCTTTCCGCGGCCTGGCGAGACGTT
GAACGCGTCCAGTCATGTTGACGGACTTGGCGGCAAAGGGGCGAACCAGGCAGTGGCCGCCGCCCGCACCGGAGCCGATG
TCTGTTTCCGCGCGGCGATCGGCGACGATACCGCCGGCCTTTGGATACGAGAACGGCTGAGCCGCGACCTCGACGCCAGC
CATCTGACGGTGCTGGCGCTGCCCAGCGACCGGTCGACGATCATCGTCGATGTGCGGGGCGAAAACCTCATCGTCACCGG
CGCCAGCTGCGCCGCCGCCTTCGATCCACTGGCCGACGGCGGTTTCGCGACGTCGATCGAACACGGCGACATCGTGGTGA
TGCAAGGCAATCTTCTTCCCGATGTGACGACATCCTGCCTGCAAGCGGCGCGCAGCGCGGGCGCCATGACGATCCTCAAT
CCGAGTCCGCTCGCGGTCGGTTCGACACCGTGTATGGACGCCGTCAGCCTCGCTGTCGTCAACGCAGGCGAAGCAGAGCA
ACTGACCGGAACCGGCGATGCAGCCTCGGCGGCCCGCGAATTGATCCGTCAAGGCACGGAGGGCACGATCGTGACGCTTG
GCGCGGCCGGCTGCCTGGTTGCCGACCGCGAAGGACGGATCGACCGGTTCGCGGCGCCCAAGGTGGACGTGGTGGACACC
AGCGGCGCGGGCGATGTCTTTTGCGGCTGCCTCGCAGGCTTCCTTGCGGCTGGCATCAGCCTCGCCGCGGCAGCGCGGAT
CGCTGTACGAGCCGCGGCCATTTCGGTCGGGCGCCCCGGCACGCTCGGCTCCTGCCCCGACAGGCAGGAGATGAAGATAC
TCATGGAAACGACGGAAGCGGAAACCGCATGA

Upstream 100 bases:

>100_bases
ATGTCGGGCCGCACTGGCTGCCGCCGGGTTTCATCGCCTGGATTGGCTACAAGACGCTGTTCGAACAGATGCTGGGCTGG
GCGACAGCCAGGGATTAGCC

Downstream 100 bases:

>100_bases
CAAAATCCCCCAACTCCATCGGCTCCAAGCAGGTCGCCGATGACGCGCTGCAGTCGATCTTCGGCCGAAAGAAAGTGGTG
ATCGGCGTCGTTCATCTGGC

Product: ribokinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MRVHVVGNVCVDTTFQLGRFPRPGETLNASSHVDGLGGKGANQAVAAARTGADVCFRAAIGDDTAGLWIRERLSRDLDAS
HLTVLALPSDRSTIIVDVRGENLIVTGASCAAAFDPLADGGFATSIEHGDIVVMQGNLLPDVTTSCLQAARSAGAMTILN
PSPLAVGSTPCMDAVSLAVVNAGEAEQLTGTGDAASAARELIRQGTEGTIVTLGAAGCLVADREGRIDRFAAPKVDVVDT
SGAGDVFCGCLAGFLAAGISLAAAARIAVRAAAISVGRPGTLGSCPDRQEMKILMETTEAETA

Sequences:

>Translated_303_residues
MRVHVVGNVCVDTTFQLGRFPRPGETLNASSHVDGLGGKGANQAVAAARTGADVCFRAAIGDDTAGLWIRERLSRDLDAS
HLTVLALPSDRSTIIVDVRGENLIVTGASCAAAFDPLADGGFATSIEHGDIVVMQGNLLPDVTTSCLQAARSAGAMTILN
PSPLAVGSTPCMDAVSLAVVNAGEAEQLTGTGDAASAARELIRQGTEGTIVTLGAAGCLVADREGRIDRFAAPKVDVVDT
SGAGDVFCGCLAGFLAAGISLAAAARIAVRAAAISVGRPGTLGSCPDRQEMKILMETTEAETA
>Mature_303_residues
MRVHVVGNVCVDTTFQLGRFPRPGETLNASSHVDGLGGKGANQAVAAARTGADVCFRAAIGDDTAGLWIRERLSRDLDAS
HLTVLALPSDRSTIIVDVRGENLIVTGASCAAAFDPLADGGFATSIEHGDIVVMQGNLLPDVTTSCLQAARSAGAMTILN
PSPLAVGSTPCMDAVSLAVVNAGEAEQLTGTGDAASAARELIRQGTEGTIVTLGAAGCLVADREGRIDRFAAPKVDVVDT
SGAGDVFCGCLAGFLAAGISLAAAARIAVRAAAISVGRPGTLGSCPDRQEMKILMETTEAETA

Specific function: Ribose metabolism; first step. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

Organism=Homo sapiens, GI11545855, Length=288, Percent_Identity=33.3333333333333, Blast_Score=124, Evalue=9e-29,
Organism=Escherichia coli, GI1790193, Length=299, Percent_Identity=34.1137123745819, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI87082343, Length=305, Percent_Identity=30.8196721311475, Blast_Score=88, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI17532905, Length=304, Percent_Identity=35.8552631578947, Blast_Score=144, Evalue=6e-35,
Organism=Saccharomyces cerevisiae, GI6319884, Length=325, Percent_Identity=27.6923076923077, Blast_Score=94, Evalue=4e-20,
Organism=Drosophila melanogaster, GI20128807, Length=308, Percent_Identity=33.4415584415584, Blast_Score=99, Evalue=5e-21,
Organism=Drosophila melanogaster, GI24583886, Length=312, Percent_Identity=26.9230769230769, Blast_Score=86, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173
- InterPro:   IPR011877
- InterPro:   IPR002139 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: =2.7.1.15 [H]

Molecular weight: Translated: 30716; Mature: 30716

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVHVVGNVCVDTTFQLGRFPRPGETLNASSHVDGLGGKGANQAVAAARTGADVCFRAAI
CEEEEEECEEECCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHEEEEEC
GDDTAGLWIRERLSRDLDASHLTVLALPSDRSTIIVDVRGENLIVTGASCAAAFDPLADG
CCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEECCCEEEEECCHHHHHCCCCCCC
GFATSIEHGDIVVMQGNLLPDVTTSCLQAARSAGAMTILNPSPLAVGSTPCMDAVSLAVV
CEEEEECCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHEEEEE
NAGEAEQLTGTGDAASAARELIRQGTEGTIVTLGAAGCLVADREGRIDRFAAPKVDVVDT
CCCCCHHCCCCCCHHHHHHHHHHCCCCCCEEEEECCCEEEECCCCCCCHHCCCCEEEEEC
SGAGDVFCGCLAGFLAAGISLAAAARIAVRAAAISVGRPGTLGSCPDRQEMKILMETTEA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHEEEEECCCC
ETA
CCC
>Mature Secondary Structure
MRVHVVGNVCVDTTFQLGRFPRPGETLNASSHVDGLGGKGANQAVAAARTGADVCFRAAI
CEEEEEECEEECCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHEEEEEC
GDDTAGLWIRERLSRDLDASHLTVLALPSDRSTIIVDVRGENLIVTGASCAAAFDPLADG
CCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEECCCEEEEECCHHHHHCCCCCCC
GFATSIEHGDIVVMQGNLLPDVTTSCLQAARSAGAMTILNPSPLAVGSTPCMDAVSLAVV
CEEEEECCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHEEEEE
NAGEAEQLTGTGDAASAARELIRQGTEGTIVTLGAAGCLVADREGRIDRFAAPKVDVVDT
CCCCCHHCCCCCCHHHHHHHHHHCCCCCCEEEEECCCEEEECCCCCCCHHCCCCEEEEEC
SGAGDVFCGCLAGFLAAGISLAAAARIAVRAAAISVGRPGTLGSCPDRQEMKILMETTEA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHEEEEECCCC
ETA
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]