| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13476359
Identifier: 13476359
GI number: 13476359
Start: 6338242
End: 6338811
Strand: Reverse
Name: 13476359
Synonym: mll7655
Alternate gene names: NA
Gene position: 6338811-6338242 (Counterclockwise)
Preceding gene: 13476360
Following gene: 13476357
Centisome position: 90.09
GC content: 62.81
Gene sequence:
>570_bases ATGCGTAATGTCCTGGCCACGCTACGCCGTCTTTTCCACGCCGTGCTGCTCGGCCTGGTGGGTGCCGGCATCGTGCACAT CGTTGTGCTGCTTCTGGTGCCGGAATTTTCGGAGCGCGACGCCTGGTCACGACTGTCCATGGCATCCGATCTCTACCGGA TGAACCGGCTCGATGCCGAGGCGGGCGGCGCGCCGGTGGTGAAATCGGTCGACCCGCTGTTTTATGCCACGGCCTGCCGG TTCGACCTCGAGGAAGGCATGGTCCGCATCAAGGCGCCGGGGAACGTCCCCTTCTGGTCGGTGTCGGTCTATGACCGCAA CGGCCACAACATCTATTCCTTCAACGACCATACGGCGACCGGCGGCAAGCTTGATGCCGTGGTGCTGACGCCGGCGCAGA TGATCGACGTGCGCAAGGATTTGCCGGAGGGCCTGCAGGGGGCGATCTTCGTCGAAGCGCCGATCGACGAGGGTATCTTC GTCATCCGCAGCTTCGTGCCGGACGACAGCTGGAAGCCGATCGTGTCGCGCTTTCTCGATCAAAGCTCCTGCGAGCTGCA GGATTTCTAG
Upstream 100 bases:
>100_bases GGGCGGATGTATTTCGTCCTGACCTTCTACGACACGCCGATCGCCAGCAGCACCGGCCTGTCGGACGTCTCGCTGCCCAG GATCGTGAAGGCCGGCTGCG
Downstream 100 bases:
>100_bases CTCAGAGCTCCTGAGCTGACGGCCTGATGGACCAGGCCAAAGGCTTCAGCAAGGCTCAGTGATGCGGCACCGGCGTCCGC GGCGATCCCGGCTTGTCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MRNVLATLRRLFHAVLLGLVGAGIVHIVVLLLVPEFSERDAWSRLSMASDLYRMNRLDAEAGGAPVVKSVDPLFYATACR FDLEEGMVRIKAPGNVPFWSVSVYDRNGHNIYSFNDHTATGGKLDAVVLTPAQMIDVRKDLPEGLQGAIFVEAPIDEGIF VIRSFVPDDSWKPIVSRFLDQSSCELQDF
Sequences:
>Translated_189_residues MRNVLATLRRLFHAVLLGLVGAGIVHIVVLLLVPEFSERDAWSRLSMASDLYRMNRLDAEAGGAPVVKSVDPLFYATACR FDLEEGMVRIKAPGNVPFWSVSVYDRNGHNIYSFNDHTATGGKLDAVVLTPAQMIDVRKDLPEGLQGAIFVEAPIDEGIF VIRSFVPDDSWKPIVSRFLDQSSCELQDF >Mature_189_residues MRNVLATLRRLFHAVLLGLVGAGIVHIVVLLLVPEFSERDAWSRLSMASDLYRMNRLDAEAGGAPVVKSVDPLFYATACR FDLEEGMVRIKAPGNVPFWSVSVYDRNGHNIYSFNDHTATGGKLDAVVLTPAQMIDVRKDLPEGLQGAIFVEAPIDEGIF VIRSFVPDDSWKPIVSRFLDQSSCELQDF
Specific function: Unknown
COG id: COG5436
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20980; Mature: 20980
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNVLATLRRLFHAVLLGLVGAGIVHIVVLLLVPEFSERDAWSRLSMASDLYRMNRLDAE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCC AGGAPVVKSVDPLFYATACRFDLEEGMVRIKAPGNVPFWSVSVYDRNGHNIYSFNDHTAT CCCCCCHHCCCHHHHHHHHHEEHHHCEEEEECCCCCCEEEEEEEECCCCEEEEECCCCCC GGKLDAVVLTPAQMIDVRKDLPEGLQGAIFVEAPIDEGIFVIRSFVPDDSWKPIVSRFLD CCCEEEEEECHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEHHHCCCCCCHHHHHHHHC QSSCELQDF CCCCCCCCC >Mature Secondary Structure MRNVLATLRRLFHAVLLGLVGAGIVHIVVLLLVPEFSERDAWSRLSMASDLYRMNRLDAE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCC AGGAPVVKSVDPLFYATACRFDLEEGMVRIKAPGNVPFWSVSVYDRNGHNIYSFNDHTAT CCCCCCHHCCCHHHHHHHHHEEHHHCEEEEECCCCCCEEEEEEEECCCCEEEEECCCCCC GGKLDAVVLTPAQMIDVRKDLPEGLQGAIFVEAPIDEGIFVIRSFVPDDSWKPIVSRFLD CCCEEEEEECHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEHHHCCCCCCHHHHHHHHC QSSCELQDF CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA