| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is cycG [H]
Identifier: 13476346
GI number: 13476346
Start: 6326590
End: 6327537
Strand: Direct
Name: cycG [H]
Synonym: mlr7639
Alternate gene names: 13476346
Gene position: 6326590-6327537 (Clockwise)
Preceding gene: 13476345
Following gene: 13476350
Centisome position: 89.92
GC content: 65.08
Gene sequence:
>948_bases ATGCCCTGGCTAAAAAAACTCGTCGGCGCCGTCGTCGTCCTGGGCGGTGTCGGCGCGGTCGCCGGCTGGGTCCTGTCGGC ACCGGCCAAGCTGGACGCGACGGCCCTGGCGCAACTCGGGCCGGGCGACGCGACTAAGGGCAAGCGCATTTTCTATGCCG GCGGCTGCACCTCCTGCCACGCGAAGCCGGGTTCGCAGGGCGATGCGCGGCTTCAACTGGTCGGTGGTCTCCAGCTCAAG ACGCCGTTCGGCACCTTTGTTCCGCCCAACATTTCGCAAGACCCTAAAGATGGCATCGGTGCGTGGTCGGTCGAGGATCT TGCCAACGCCATGCTCAAGGGCGTTTCGCCGTCCGGCGAGCATTTCTACCCGGCCTTTCCCTATGCGTCCTATGCCCGCA TGAAGCCTTCGGACATTGCCGACCTCTATGCCTTCCTGAAGACGCTGCCCGCCGTCGCCGGCAAGGCGCCGGACAATTCG CTCGGTTTCCCCTTCAACATCCGTCGCGGCATCGGCCTGTGGAAACGGCTTTATCTCAGCGACCAGCCTGTTGTTGCGCT GGCCGATGGCGAGCCTGAGCCGGTCATGGCCGGCCGCTATCTGGTCGAAGGGCCCGGCCATTGCGGTGAATGCCACAGCC CGCGCGACTTCGCAGGCGGCACCAAGAAAAGCGAGTGGCTGGCAGGTGCCGTGGCCGCCGAGGGCAGTGGAATTGTGCCG AACATCACATCGGGCAAGGGCGGCCTCGCCAACTGGTCGGAAGCCGACATAGCCAACTATCTCGAAACCGGCTTCACGCC CAATTTCGATTCCGTCGGGGGCGCGATGGTCGACGTGCAGCGCAACATGGCCGCGCTGACACCGGAGGATCGGGCCTCGA TCGCCGCCTATCTCAAGGCGGTACCGCCGCATCCCAACGGTTATCCGGCGCGTAAGCCGGCGAGCTGA
Upstream 100 bases:
>100_bases CGGCGACGTTGATGCCCTGAAGGGGCAGATCAACACCCTCGGCGGCGATTGCGGCACCTGTCACCAGACCTACAGGGTGA AAAAAGGCTGATAGCCGGCG
Downstream 100 bases:
>100_bases TTGTCGACTAGAGGTGCCGGTCGCCGAGGAAATCGAAGCCTGCCTCGAAGAAATGATTGTAGTTGCAGGTCAGTTCCTCG CCGGGCGCGATGTCGCGCAA
Product: cytochrome c-553
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 315; Mature: 314
Protein sequence:
>315_residues MPWLKKLVGAVVVLGGVGAVAGWVLSAPAKLDATALAQLGPGDATKGKRIFYAGGCTSCHAKPGSQGDARLQLVGGLQLK TPFGTFVPPNISQDPKDGIGAWSVEDLANAMLKGVSPSGEHFYPAFPYASYARMKPSDIADLYAFLKTLPAVAGKAPDNS LGFPFNIRRGIGLWKRLYLSDQPVVALADGEPEPVMAGRYLVEGPGHCGECHSPRDFAGGTKKSEWLAGAVAAEGSGIVP NITSGKGGLANWSEADIANYLETGFTPNFDSVGGAMVDVQRNMAALTPEDRASIAAYLKAVPPHPNGYPARKPAS
Sequences:
>Translated_315_residues MPWLKKLVGAVVVLGGVGAVAGWVLSAPAKLDATALAQLGPGDATKGKRIFYAGGCTSCHAKPGSQGDARLQLVGGLQLK TPFGTFVPPNISQDPKDGIGAWSVEDLANAMLKGVSPSGEHFYPAFPYASYARMKPSDIADLYAFLKTLPAVAGKAPDNS LGFPFNIRRGIGLWKRLYLSDQPVVALADGEPEPVMAGRYLVEGPGHCGECHSPRDFAGGTKKSEWLAGAVAAEGSGIVP NITSGKGGLANWSEADIANYLETGFTPNFDSVGGAMVDVQRNMAALTPEDRASIAAYLKAVPPHPNGYPARKPAS >Mature_314_residues PWLKKLVGAVVVLGGVGAVAGWVLSAPAKLDATALAQLGPGDATKGKRIFYAGGCTSCHAKPGSQGDARLQLVGGLQLKT PFGTFVPPNISQDPKDGIGAWSVEDLANAMLKGVSPSGEHFYPAFPYASYARMKPSDIADLYAFLKTLPAVAGKAPDNSL GFPFNIRRGIGLWKRLYLSDQPVVALADGEPEPVMAGRYLVEGPGHCGECHSPRDFAGGTKKSEWLAGAVAAEGSGIVPN ITSGKGGLANWSEADIANYLETGFTPNFDSVGGAMVDVQRNMAALTPEDRASIAAYLKAVPPHPNGYPARKPAS
Specific function: Particularly expressed when cells generate energy via aerobic respiration [H]
COG id: COG2010
COG function: function code C; Cytochrome c, mono- and diheme variants
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009056 - InterPro: IPR003088 [H]
Pfam domain/function: PF00034 Cytochrom_C [H]
EC number: NA
Molecular weight: Translated: 32789; Mature: 32657
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPWLKKLVGAVVVLGGVGAVAGWVLSAPAKLDATALAQLGPGDATKGKRIFYAGGCTSCH CCHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCEEEEECCCCCCC AKPGSQGDARLQLVGGLQLKTPFGTFVPPNISQDPKDGIGAWSVEDLANAMLKGVSPSGE CCCCCCCCCEEEEEECEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC HFYPAFPYASYARMKPSDIADLYAFLKTLPAVAGKAPDNSLGFPFNIRRGIGLWKRLYLS CCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHCC DQPVVALADGEPEPVMAGRYLVEGPGHCGECHSPRDFAGGTKKSEWLAGAVAAEGSGIVP CCCEEEEECCCCCCEECCCEEEECCCCCCCCCCCHHHCCCCCCHHHHHHHHHCCCCCCCC NITSGKGGLANWSEADIANYLETGFTPNFDSVGGAMVDVQRNMAALTPEDRASIAAYLKA CCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHCCCEEEEEHHCHHHCCCHHHHHHHHHHHH VPPHPNGYPARKPAS CCCCCCCCCCCCCCC >Mature Secondary Structure PWLKKLVGAVVVLGGVGAVAGWVLSAPAKLDATALAQLGPGDATKGKRIFYAGGCTSCH CHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCEEEEECCCCCCC AKPGSQGDARLQLVGGLQLKTPFGTFVPPNISQDPKDGIGAWSVEDLANAMLKGVSPSGE CCCCCCCCCEEEEEECEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC HFYPAFPYASYARMKPSDIADLYAFLKTLPAVAGKAPDNSLGFPFNIRRGIGLWKRLYLS CCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHCC DQPVVALADGEPEPVMAGRYLVEGPGHCGECHSPRDFAGGTKKSEWLAGAVAAEGSGIVP CCCEEEEECCCCCCEECCCEEEECCCCCCCCCCCHHHCCCCCCHHHHHHHHHCCCCCCCC NITSGKGGLANWSEADIANYLETGFTPNFDSVGGAMVDVQRNMAALTPEDRASIAAYLKA CCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHCCCEEEEEHHCHHHCCCHHHHHHHHHHHH VPPHPNGYPARKPAS CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7543472 [H]