Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is cycG [H]

Identifier: 13476346

GI number: 13476346

Start: 6326590

End: 6327537

Strand: Direct

Name: cycG [H]

Synonym: mlr7639

Alternate gene names: 13476346

Gene position: 6326590-6327537 (Clockwise)

Preceding gene: 13476345

Following gene: 13476350

Centisome position: 89.92

GC content: 65.08

Gene sequence:

>948_bases
ATGCCCTGGCTAAAAAAACTCGTCGGCGCCGTCGTCGTCCTGGGCGGTGTCGGCGCGGTCGCCGGCTGGGTCCTGTCGGC
ACCGGCCAAGCTGGACGCGACGGCCCTGGCGCAACTCGGGCCGGGCGACGCGACTAAGGGCAAGCGCATTTTCTATGCCG
GCGGCTGCACCTCCTGCCACGCGAAGCCGGGTTCGCAGGGCGATGCGCGGCTTCAACTGGTCGGTGGTCTCCAGCTCAAG
ACGCCGTTCGGCACCTTTGTTCCGCCCAACATTTCGCAAGACCCTAAAGATGGCATCGGTGCGTGGTCGGTCGAGGATCT
TGCCAACGCCATGCTCAAGGGCGTTTCGCCGTCCGGCGAGCATTTCTACCCGGCCTTTCCCTATGCGTCCTATGCCCGCA
TGAAGCCTTCGGACATTGCCGACCTCTATGCCTTCCTGAAGACGCTGCCCGCCGTCGCCGGCAAGGCGCCGGACAATTCG
CTCGGTTTCCCCTTCAACATCCGTCGCGGCATCGGCCTGTGGAAACGGCTTTATCTCAGCGACCAGCCTGTTGTTGCGCT
GGCCGATGGCGAGCCTGAGCCGGTCATGGCCGGCCGCTATCTGGTCGAAGGGCCCGGCCATTGCGGTGAATGCCACAGCC
CGCGCGACTTCGCAGGCGGCACCAAGAAAAGCGAGTGGCTGGCAGGTGCCGTGGCCGCCGAGGGCAGTGGAATTGTGCCG
AACATCACATCGGGCAAGGGCGGCCTCGCCAACTGGTCGGAAGCCGACATAGCCAACTATCTCGAAACCGGCTTCACGCC
CAATTTCGATTCCGTCGGGGGCGCGATGGTCGACGTGCAGCGCAACATGGCCGCGCTGACACCGGAGGATCGGGCCTCGA
TCGCCGCCTATCTCAAGGCGGTACCGCCGCATCCCAACGGTTATCCGGCGCGTAAGCCGGCGAGCTGA

Upstream 100 bases:

>100_bases
CGGCGACGTTGATGCCCTGAAGGGGCAGATCAACACCCTCGGCGGCGATTGCGGCACCTGTCACCAGACCTACAGGGTGA
AAAAAGGCTGATAGCCGGCG

Downstream 100 bases:

>100_bases
TTGTCGACTAGAGGTGCCGGTCGCCGAGGAAATCGAAGCCTGCCTCGAAGAAATGATTGTAGTTGCAGGTCAGTTCCTCG
CCGGGCGCGATGTCGCGCAA

Product: cytochrome c-553

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 314

Protein sequence:

>315_residues
MPWLKKLVGAVVVLGGVGAVAGWVLSAPAKLDATALAQLGPGDATKGKRIFYAGGCTSCHAKPGSQGDARLQLVGGLQLK
TPFGTFVPPNISQDPKDGIGAWSVEDLANAMLKGVSPSGEHFYPAFPYASYARMKPSDIADLYAFLKTLPAVAGKAPDNS
LGFPFNIRRGIGLWKRLYLSDQPVVALADGEPEPVMAGRYLVEGPGHCGECHSPRDFAGGTKKSEWLAGAVAAEGSGIVP
NITSGKGGLANWSEADIANYLETGFTPNFDSVGGAMVDVQRNMAALTPEDRASIAAYLKAVPPHPNGYPARKPAS

Sequences:

>Translated_315_residues
MPWLKKLVGAVVVLGGVGAVAGWVLSAPAKLDATALAQLGPGDATKGKRIFYAGGCTSCHAKPGSQGDARLQLVGGLQLK
TPFGTFVPPNISQDPKDGIGAWSVEDLANAMLKGVSPSGEHFYPAFPYASYARMKPSDIADLYAFLKTLPAVAGKAPDNS
LGFPFNIRRGIGLWKRLYLSDQPVVALADGEPEPVMAGRYLVEGPGHCGECHSPRDFAGGTKKSEWLAGAVAAEGSGIVP
NITSGKGGLANWSEADIANYLETGFTPNFDSVGGAMVDVQRNMAALTPEDRASIAAYLKAVPPHPNGYPARKPAS
>Mature_314_residues
PWLKKLVGAVVVLGGVGAVAGWVLSAPAKLDATALAQLGPGDATKGKRIFYAGGCTSCHAKPGSQGDARLQLVGGLQLKT
PFGTFVPPNISQDPKDGIGAWSVEDLANAMLKGVSPSGEHFYPAFPYASYARMKPSDIADLYAFLKTLPAVAGKAPDNSL
GFPFNIRRGIGLWKRLYLSDQPVVALADGEPEPVMAGRYLVEGPGHCGECHSPRDFAGGTKKSEWLAGAVAAEGSGIVPN
ITSGKGGLANWSEADIANYLETGFTPNFDSVGGAMVDVQRNMAALTPEDRASIAAYLKAVPPHPNGYPARKPAS

Specific function: Particularly expressed when cells generate energy via aerobic respiration [H]

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 32789; Mature: 32657

Theoretical pI: Translated: 8.30; Mature: 8.30

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPWLKKLVGAVVVLGGVGAVAGWVLSAPAKLDATALAQLGPGDATKGKRIFYAGGCTSCH
CCHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCEEEEECCCCCCC
AKPGSQGDARLQLVGGLQLKTPFGTFVPPNISQDPKDGIGAWSVEDLANAMLKGVSPSGE
CCCCCCCCCEEEEEECEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
HFYPAFPYASYARMKPSDIADLYAFLKTLPAVAGKAPDNSLGFPFNIRRGIGLWKRLYLS
CCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHCC
DQPVVALADGEPEPVMAGRYLVEGPGHCGECHSPRDFAGGTKKSEWLAGAVAAEGSGIVP
CCCEEEEECCCCCCEECCCEEEECCCCCCCCCCCHHHCCCCCCHHHHHHHHHCCCCCCCC
NITSGKGGLANWSEADIANYLETGFTPNFDSVGGAMVDVQRNMAALTPEDRASIAAYLKA
CCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHCCCEEEEEHHCHHHCCCHHHHHHHHHHHH
VPPHPNGYPARKPAS
CCCCCCCCCCCCCCC
>Mature Secondary Structure 
PWLKKLVGAVVVLGGVGAVAGWVLSAPAKLDATALAQLGPGDATKGKRIFYAGGCTSCH
CHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCEEEEECCCCCCC
AKPGSQGDARLQLVGGLQLKTPFGTFVPPNISQDPKDGIGAWSVEDLANAMLKGVSPSGE
CCCCCCCCCEEEEEECEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
HFYPAFPYASYARMKPSDIADLYAFLKTLPAVAGKAPDNSLGFPFNIRRGIGLWKRLYLS
CCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHCC
DQPVVALADGEPEPVMAGRYLVEGPGHCGECHSPRDFAGGTKKSEWLAGAVAAEGSGIVP
CCCEEEEECCCCCCEECCCEEEECCCCCCCCCCCHHHCCCCCCHHHHHHHHHCCCCCCCC
NITSGKGGLANWSEADIANYLETGFTPNFDSVGGAMVDVQRNMAALTPEDRASIAAYLKA
CCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHCCCEEEEEHHCHHHCCCHHHHHHHHHHHH
VPPHPNGYPARKPAS
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7543472 [H]