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The map label for this gene is 13476345

Identifier: 13476345

GI number: 13476345

Start: 6326170

End: 6326580

Strand: Direct

Name: 13476345

Synonym: mlr7638

Alternate gene names: NA

Gene position: 6326170-6326580 (Clockwise)

Preceding gene: 13476344

Following gene: 13476346

Centisome position: 89.91

GC content: 63.99

Gene sequence:

>411_bases
ATGCTCGCCTTCGCCGGTTCGGCGGCCTTTGCCGATCCGATCCTCGACCGGCAGGCTCTGATGAAGGAACGCGGAAAGAT
CGTCGGCGGGTTGGCGAAGGTCGCCAAGGGCGAGGATCCCTTTGATGCCGCGGCCGTGCTGACACAACTCCAGGCGTTGC
AGGCGAATGCCGAGAAGCTCGACGTCGATGCGTTGTTCCCTGCCGGCAGCGATGCCGGCGACACCACGGCGGGGCCGAAG
ATCTGGGAAGACATGGCCGGCTTCAAGGCTACCGAGGACAAATATCTCGCCGACGTCAAGGCCGCCACCGCTGCTGCTCC
CGGCGACGTTGATGCCCTGAAGGGGCAGATCAACACCCTCGGCGGCGATTGCGGCACCTGTCACCAGACCTACAGGGTGA
AAAAAGGCTGA

Upstream 100 bases:

>100_bases
AGCAGAGGGAATATTCCGTCGGCCGCGTCCGTTAACGTCGTGTCCCAAATACCTTCATCACGGAGCCAAATGAATGAGAA
AGCTTGTCATCGCCATCTCA

Downstream 100 bases:

>100_bases
TAGCCGGCGATGCCCTGGCTAAAAAAACTCGTCGGCGCCGTCGTCGTCCTGGGCGGTGTCGGCGCGGTCGCCGGCTGGGT
CCTGTCGGCACCGGCCAAGC

Product: cytochrome c556

Products: NA

Alternate protein names: Cytochrome c556 [H]

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MLAFAGSAAFADPILDRQALMKERGKIVGGLAKVAKGEDPFDAAAVLTQLQALQANAEKLDVDALFPAGSDAGDTTAGPK
IWEDMAGFKATEDKYLADVKAATAAAPGDVDALKGQINTLGGDCGTCHQTYRVKKG

Sequences:

>Translated_136_residues
MLAFAGSAAFADPILDRQALMKERGKIVGGLAKVAKGEDPFDAAAVLTQLQALQANAEKLDVDALFPAGSDAGDTTAGPK
IWEDMAGFKATEDKYLADVKAATAAAPGDVDALKGQINTLGGDCGTCHQTYRVKKG
>Mature_136_residues
MLAFAGSAAFADPILDRQALMKERGKIVGGLAKVAKGEDPFDAAAVLTQLQALQANAEKLDVDALFPAGSDAGDTTAGPK
IWEDMAGFKATEDKYLADVKAATAAAPGDVDALKGQINTLGGDCGTCHQTYRVKKG

Specific function: Low-spin monoheme cytochrome c [H]

COG id: COG3909

COG function: function code C; Cytochrome c556

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010980
- InterPro:   IPR002321
- InterPro:   IPR012127
- InterPro:   IPR015984 [H]

Pfam domain/function: PF01322 Cytochrom_C_2 [H]

EC number: NA

Molecular weight: Translated: 14012; Mature: 14012

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: PS51009 CYTCII

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAFAGSAAFADPILDRQALMKERGKIVGGLAKVAKGEDPFDAAAVLTQLQALQANAEKL
CCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHC
DVDALFPAGSDAGDTTAGPKIWEDMAGFKATEDKYLADVKAATAAAPGDVDALKGQINTL
CCEEECCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHC
GGDCGTCHQTYRVKKG
CCCCCCHHHHEECCCC
>Mature Secondary Structure
MLAFAGSAAFADPILDRQALMKERGKIVGGLAKVAKGEDPFDAAAVLTQLQALQANAEKL
CCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHC
DVDALFPAGSDAGDTTAGPKIWEDMAGFKATEDKYLADVKAATAAAPGDVDALKGQINTL
CCEEECCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHC
GGDCGTCHQTYRVKKG
CCCCCCHHHHEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194 [H]