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The map label for this gene is greB [C]

Identifier: 13476329

GI number: 13476329

Start: 6309048

End: 6309521

Strand: Direct

Name: greB [C]

Synonym: mlr7618

Alternate gene names: 13476329

Gene position: 6309048-6309521 (Clockwise)

Preceding gene: 13476327

Following gene: 13476332

Centisome position: 89.67

GC content: 62.45

Gene sequence:

>474_bases
ATGAGCAGAGCTTTTACCCGCGAAGAAGACAGCGAGAATGCCATTGCCGGTGTCGGCGAGCGGCCGATCAGCCCGCACCG
CAACCTCGTGACGGAGCGCGGCCTGGCGCAGATCGAGGACAATCTGGCCGAACTGCGTGACATTCTGGCGAAAGCCGAGA
GGAAGGCAGACCGCGAGCGTATCGCGGTGGTGTCACGCGATTTGCGCTACTGGACGGCCCGACGCGAAAACGCCGAACTG
TCCGTACCGGAACCCGGCAGCGACGTCGTCCGCTTCGGCATGGGCGTCACGCTGGAAGCCGATGACGGCAAGAAGGTGCA
TTGGAAAATCGTCGGCGAGGACGAGGCCGATCCCACCAAGGGAAGCATTTCGCATGTTTCGCCGATGGCCGTCGCCCTGT
TCGGCAAGAAGGTCGGCGACGTGGCCGCGGTCAACGGCAAGGAATGGGAAATCGTCAAGCTCTCGGATAGTTAG

Upstream 100 bases:

>100_bases
ATCTCAGCGTTCAAGCCTGATGTCGCAGGAATCGTGCCAAACGTACCGTTCCTTTTCACAATGACTTGTCGAGCTGTCGC
TCGAGGCTTAGGTTCAGGCA

Downstream 100 bases:

>100_bases
AGCGGCATAGCCTAGTTGGCTGCCAGCAGTCGATCCATTAGCCGATCCGCCGCTTCCGGAATAACCGTGCCCGGCGGGAA
GATTTCCGCCGCGCCGGCTT

Product: transcription elongation factor greA

Products: NA

Alternate protein names: Transcription Elongation Factor Regulatory Protein; Transcription Elongation Factor; Transcription Elongation Factor GreB; Transcription Elongation Factor And Transcript Cleavage; Transcription Elongation Factor GreA/GreB; Transcription Elongation Factor GreA/GreB Family; Transcription Elongation Factor Greb; Transcription Elongation Factor GreA; Transcription Elongation Factor Protein; Transcription Elongation Factor Grea/Greb Family

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MSRAFTREEDSENAIAGVGERPISPHRNLVTERGLAQIEDNLAELRDILAKAERKADRERIAVVSRDLRYWTARRENAEL
SVPEPGSDVVRFGMGVTLEADDGKKVHWKIVGEDEADPTKGSISHVSPMAVALFGKKVGDVAAVNGKEWEIVKLSDS

Sequences:

>Translated_157_residues
MSRAFTREEDSENAIAGVGERPISPHRNLVTERGLAQIEDNLAELRDILAKAERKADRERIAVVSRDLRYWTARRENAEL
SVPEPGSDVVRFGMGVTLEADDGKKVHWKIVGEDEADPTKGSISHVSPMAVALFGKKVGDVAAVNGKEWEIVKLSDS
>Mature_156_residues
SRAFTREEDSENAIAGVGERPISPHRNLVTERGLAQIEDNLAELRDILAKAERKADRERIAVVSRDLRYWTARRENAELS
VPEPGSDVVRFGMGVTLEADDGKKVHWKIVGEDEADPTKGSISHVSPMAVALFGKKVGDVAAVNGKEWEIVKLSDS

Specific function: Necessary For Efficient RNA Polymerase Transcription Elongation Past Template-Encoded Arresting Sites. The Arresting Sites In DNA Have The Property Of Trapping A Certain Fraction Of Elongating RNA Polymerases That Pass Through, Resulting In Locked Ternar

COG id: COG0782

COG function: function code K; Transcription elongation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17292; Mature: 17160

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRAFTREEDSENAIAGVGERPISPHRNLVTERGLAQIEDNLAELRDILAKAERKADRER
CCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IAVVSRDLRYWTARRENAELSVPEPGSDVVRFGMGVTLEADDGKKVHWKIVGEDEADPTK
HHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHCCCEEEECCCCCEEEEEEECCCCCCCCC
GSISHVSPMAVALFGKKVGDVAAVNGKEWEIVKLSDS
CCCCCCCHHHHHHHHHHCCCEEEECCCCEEEEEECCC
>Mature Secondary Structure 
SRAFTREEDSENAIAGVGERPISPHRNLVTERGLAQIEDNLAELRDILAKAERKADRER
CCCCCCCCCCCCCEECCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IAVVSRDLRYWTARRENAELSVPEPGSDVVRFGMGVTLEADDGKKVHWKIVGEDEADPTK
HHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHCCCEEEECCCCCEEEEEEECCCCCCCCC
GSISHVSPMAVALFGKKVGDVAAVNGKEWEIVKLSDS
CCCCCCCHHHHHHHHHHCCCEEEECCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA