| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13476327
Identifier: 13476327
GI number: 13476327
Start: 6306565
End: 6307569
Strand: Direct
Name: 13476327
Synonym: mlr7616
Alternate gene names: NA
Gene position: 6306565-6307569 (Clockwise)
Preceding gene: 13476326
Following gene: 13476329
Centisome position: 89.63
GC content: 66.27
Gene sequence:
>1005_bases ATGGCAAATCCGGTTCTGATCGAGGTTCTGCGCGGCGCGATCGTCGAGAGCGCGCATCGCGGCGCCGTCGCGGTCTTCGA TGCCGACGGCAAACCGGTCCTGGAGATTGGCGACACCTCGAAGCCGGTGTTCCCGCGTTCGGCGGTCAAGGCAATCCAGG CCTTGCCGCTGGTGGAAACCGGTGCTGCCGACGTCTATGGCTTCGGCAACCGTGAGCTGGCCCTGGCCTGCGCGTCGCAT TCGGGCGAACCGGCGCATGTCGAACTGGCGCGGTCCATGCTGGCCAGGGCCGGGCTCGATGGGTCAGCGCTCGAATGCGG CGCGCATTGGCCTTCAAACCATGCTGCCGAGATTGCACTCGCCCGCACCGGCGATTTGCCCAATGCGCTGCACAACAACT GTTCAGGAAAACATTCCGGCTTCCTCTGCACCTGCGTGCATTCCGGCATTGCGCACCGTGGCTACGTCAAGGCGGGGCAC GCACTGCAGGAGATGGTGCGCGACGCGATGCAGTCGGTCACAGGTGCCGTCCATGGCGCTGATGAGCGGGCGACCGACGG CTGCTCGATCCCGACCTATGCGGTGCCGCTTAGGAGCTTCGCGCTCGGCTTTGCCCGCATGGCCACGACAAATGGTTTCG GCCCCGAGCGGGCCAAGGCGGCAAAGCGGCTGCTGGCCGCCTGCATGGCGGAGCCCTTCTATGTCGCCGGCACCGGCCGC GAAGACGTCGCGCTGATGGAAGCAGCACCTGGGCGGATCTTTGCGAAAGGCGGCGCCGAAGGCGTCCACTGTGCCGCAAT TCCGGAACTTGGCCTCGGTATCGCGCTCAAATGCGATGATGGCGCCGGCCGCGCCAGTGAAGCCATGGTTGCCGCCGTCC TCGCCAAGCTGCTGCGTGCGGACGAGGCCCTGACGGCGAAGCTCATCGAACTGGCAAACGCGCCGATCAAAAGCCGGATC GGAGCCAAGGTGGGGGCGCTGAGGCCGACTGCCGCCCTCAACTGA
Upstream 100 bases:
>100_bases CGCCTTTTGGGGTGCGCAAAGGACGCTGTAACACTTTGATTTTGCGCATGACCTCGAGGATCGATTTCGATTTTCGAGGT CATGCGCTGCGGGAGGTGGC
Downstream 100 bases:
>100_bases CGCGGTTGCGCTCAACGGTCAAATGCGCAAAGCCGCTGTTGCTTAACTGGGTAAGGTCGGCTGTCACAGGCTCGGCCCAA CGCTGGCCGATGACCGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: L-Asparaginase; Asparaginase; L-Asparaginase Rmolabile; L-Asparaginase II Protein; L-Asparaginase Rmolabile Subfamily; L-Asparaginase Rmolabile Family; Fumarate Lyase; Asparaginase-Related Protein
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MANPVLIEVLRGAIVESAHRGAVAVFDADGKPVLEIGDTSKPVFPRSAVKAIQALPLVETGAADVYGFGNRELALACASH SGEPAHVELARSMLARAGLDGSALECGAHWPSNHAAEIALARTGDLPNALHNNCSGKHSGFLCTCVHSGIAHRGYVKAGH ALQEMVRDAMQSVTGAVHGADERATDGCSIPTYAVPLRSFALGFARMATTNGFGPERAKAAKRLLAACMAEPFYVAGTGR EDVALMEAAPGRIFAKGGAEGVHCAAIPELGLGIALKCDDGAGRASEAMVAAVLAKLLRADEALTAKLIELANAPIKSRI GAKVGALRPTAALN
Sequences:
>Translated_334_residues MANPVLIEVLRGAIVESAHRGAVAVFDADGKPVLEIGDTSKPVFPRSAVKAIQALPLVETGAADVYGFGNRELALACASH SGEPAHVELARSMLARAGLDGSALECGAHWPSNHAAEIALARTGDLPNALHNNCSGKHSGFLCTCVHSGIAHRGYVKAGH ALQEMVRDAMQSVTGAVHGADERATDGCSIPTYAVPLRSFALGFARMATTNGFGPERAKAAKRLLAACMAEPFYVAGTGR EDVALMEAAPGRIFAKGGAEGVHCAAIPELGLGIALKCDDGAGRASEAMVAAVLAKLLRADEALTAKLIELANAPIKSRI GAKVGALRPTAALN >Mature_333_residues ANPVLIEVLRGAIVESAHRGAVAVFDADGKPVLEIGDTSKPVFPRSAVKAIQALPLVETGAADVYGFGNRELALACASHS GEPAHVELARSMLARAGLDGSALECGAHWPSNHAAEIALARTGDLPNALHNNCSGKHSGFLCTCVHSGIAHRGYVKAGHA LQEMVRDAMQSVTGAVHGADERATDGCSIPTYAVPLRSFALGFARMATTNGFGPERAKAAKRLLAACMAEPFYVAGTGRE DVALMEAAPGRIFAKGGAEGVHCAAIPELGLGIALKCDDGAGRASEAMVAAVLAKLLRADEALTAKLIELANAPIKSRIG AKVGALRPTAALN
Specific function: Unknown
COG id: COG4448
COG function: function code E; L-asparaginase II
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34306; Mature: 34175
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANPVLIEVLRGAIVESAHRGAVAVFDADGKPVLEIGDTSKPVFPRSAVKAIQALPLVET CCCHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCC GAADVYGFGNRELALACASHSGEPAHVELARSMLARAGLDGSALECGAHWPSNHAAEIAL CCCCEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCEEEE ARTGDLPNALHNNCSGKHSGFLCTCVHSGIAHRGYVKAGHALQEMVRDAMQSVTGAVHGA EECCCCCHHHHCCCCCCCCCEEEEEHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC DERATDGCSIPTYAVPLRSFALGFARMATTNGFGPERAKAAKRLLAACMAEPFYVAGTGR CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECCCC EDVALMEAAPGRIFAKGGAEGVHCAAIPELGLGIALKCDDGAGRASEAMVAAVLAKLLRA CCEEEEECCCCEEEECCCCCCEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHC DEALTAKLIELANAPIKSRIGAKVGALRPTAALN CHHHHHHHHHHHCCCHHHHHCCHHCCCCCHHCCC >Mature Secondary Structure ANPVLIEVLRGAIVESAHRGAVAVFDADGKPVLEIGDTSKPVFPRSAVKAIQALPLVET CCHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCC GAADVYGFGNRELALACASHSGEPAHVELARSMLARAGLDGSALECGAHWPSNHAAEIAL CCCCEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCEEEE ARTGDLPNALHNNCSGKHSGFLCTCVHSGIAHRGYVKAGHALQEMVRDAMQSVTGAVHGA EECCCCCHHHHCCCCCCCCCEEEEEHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC DERATDGCSIPTYAVPLRSFALGFARMATTNGFGPERAKAAKRLLAACMAEPFYVAGTGR CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECCCC EDVALMEAAPGRIFAKGGAEGVHCAAIPELGLGIALKCDDGAGRASEAMVAAVLAKLLRA CCEEEEECCCCEEEECCCCCCEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHC DEALTAKLIELANAPIKSRIGAKVGALRPTAALN CHHHHHHHHHHHCCCHHHHHCCHHCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA