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The map label for this gene is tldD [H]

Identifier: 13476223

GI number: 13476223

Start: 6182887

End: 6184299

Strand: Reverse

Name: tldD [H]

Synonym: mll7487

Alternate gene names: 13476223

Gene position: 6184299-6182887 (Counterclockwise)

Preceding gene: 13476224

Following gene: 13476222

Centisome position: 87.89

GC content: 65.46

Gene sequence:

>1413_bases
ATGAACAGCCTGATCGGCCAATTCGATATTTCCGACGATCGCATCAAGCAGATCGTTGCCGACACCATCAACGGCGCCGA
TGACGGCGAACTGTTTCTCGAATACAGCGAGAGCGAGGCGCTGATGTTCGACAATGGCCGGCTGAAGACCGCCAATTTCA
ACACCGACCAGGGTTTTGGCCTGCGTGCGGTCGCGGGTGAAGCCAGCGGCTACGCCCATTCGAGCGACCTCTCCGAAGCC
TCGCTGCTGCGCGCGGCCGCGGCGGTCTCGACCGTCAAGGGCGGCTATTCCGGTACGCTTGCCGCCGCGCCTGCCCGCAC
CAACCGCCATCTCTACGGCGACGAGAACCCGATCCCCTCGCCCTCCTTCGAGGCCAAGGCGAAGTTGCTGCAGGAAATCG
ACGCCTGGCTGCGTGCCGAGGATCCGCGCGTGCGCCAGGTGACGGCCTCGCTCGCCGCGTCCTGGCAGCATGTCGAGATC
GTGCGCGCCGACGGCCAGGTGGTACGCGATATCAGGCCGCTGGTCCGCATCAACGTCTCGGTCGTGGTCGGCGACGGCGA
CCGCCAGGAAAGCGGCTCCTACGGCATGGGCGGACGCAAGGCGTTCGGCGACTTCCTGATCGAGGACAGCTGGAAGCATG
CCGCCAGGGAAGCGCTGCGGCAAGCGCTGGTCAATCTCGAGGCCATCCCAGCTCCGGCCGGCACATTCGACATCGTGCTG
TCCAGCGGCTGGCCGGGCGTGATGCTGCACGAAGCCGTCGGGCACGGGCTGGAAGGCGATTTCAACCGCAAGAAGACCTC
GGCCTTCGCCGGCCTGCTGGGCCAGCAGGTCGCCGCCAAGGGCGTCACCGTCGTCGACGACGGCACCATTCCGGAGCGGC
GCGGCTCGCTCACCGTCGACGATGAAGGCACGCCATCGGCCCGCAACGTGCTGATAGAGGACGGCAAGTTGGTCGGCTAC
ATGCAGGACCGGCAGAACGCCCGGCTGATGGGCATGAAGGCCACCGGCAACGGAAGGCGCGAAGGCTATGCGCATCAGCC
GATGCCGCGCATGACCAACACCTACATGACGTCGGGCGACATGGAGCCGGACGAGATCATCGCCTCGGTCAAGAACGGCA
TCTACGCCGTCTCCTTCGGCGGCGGCCAGGTCGACATCACGTCGGGCAAATTCGTATTCGGCTGCACCGAGGCCTACATG
ATCGAGAACGGCAAGGTGACGCAGCCGATCAAGGGCGCGATGCTGATCGGCAACGGGCCTGACGCCATGCACCGCGTCTC
GATGGTCGGCAACGACATGAAACTCGACAATGGCATCGGCATGTGCGGCAAGGCCGGACAGGGCGTGCCGGTCGGCGTCG
GCCAGCCGCATCTGAGGATGAACCAAATGACGGTGGGCGGCACCAGGGTTTGA

Upstream 100 bases:

>100_bases
GCCGTCGTCATTCGCCGACGCCGATCGTCATTGCCGATTGTGCGGGCGCGGCTTCGCGCCTACATCGGGGGAAAGCAATC
TTCCCACGGACGGACGCGCC

Downstream 100 bases:

>100_bases
TGGGAATGCATCGAGATAAACTCTGATGGCCGACTCCGAAAAGCTCACCACCACCGTCTCAACCAAGGGGCAAGTGATCC
TGCCGAGCGCCATCCGCAAA

Product: TldD protein, suppresses inhibitory activity of CsrA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 470; Mature: 470

Protein sequence:

>470_residues
MNSLIGQFDISDDRIKQIVADTINGADDGELFLEYSESEALMFDNGRLKTANFNTDQGFGLRAVAGEASGYAHSSDLSEA
SLLRAAAAVSTVKGGYSGTLAAAPARTNRHLYGDENPIPSPSFEAKAKLLQEIDAWLRAEDPRVRQVTASLAASWQHVEI
VRADGQVVRDIRPLVRINVSVVVGDGDRQESGSYGMGGRKAFGDFLIEDSWKHAAREALRQALVNLEAIPAPAGTFDIVL
SSGWPGVMLHEAVGHGLEGDFNRKKTSAFAGLLGQQVAAKGVTVVDDGTIPERRGSLTVDDEGTPSARNVLIEDGKLVGY
MQDRQNARLMGMKATGNGRREGYAHQPMPRMTNTYMTSGDMEPDEIIASVKNGIYAVSFGGGQVDITSGKFVFGCTEAYM
IENGKVTQPIKGAMLIGNGPDAMHRVSMVGNDMKLDNGIGMCGKAGQGVPVGVGQPHLRMNQMTVGGTRV

Sequences:

>Translated_470_residues
MNSLIGQFDISDDRIKQIVADTINGADDGELFLEYSESEALMFDNGRLKTANFNTDQGFGLRAVAGEASGYAHSSDLSEA
SLLRAAAAVSTVKGGYSGTLAAAPARTNRHLYGDENPIPSPSFEAKAKLLQEIDAWLRAEDPRVRQVTASLAASWQHVEI
VRADGQVVRDIRPLVRINVSVVVGDGDRQESGSYGMGGRKAFGDFLIEDSWKHAAREALRQALVNLEAIPAPAGTFDIVL
SSGWPGVMLHEAVGHGLEGDFNRKKTSAFAGLLGQQVAAKGVTVVDDGTIPERRGSLTVDDEGTPSARNVLIEDGKLVGY
MQDRQNARLMGMKATGNGRREGYAHQPMPRMTNTYMTSGDMEPDEIIASVKNGIYAVSFGGGQVDITSGKFVFGCTEAYM
IENGKVTQPIKGAMLIGNGPDAMHRVSMVGNDMKLDNGIGMCGKAGQGVPVGVGQPHLRMNQMTVGGTRV
>Mature_470_residues
MNSLIGQFDISDDRIKQIVADTINGADDGELFLEYSESEALMFDNGRLKTANFNTDQGFGLRAVAGEASGYAHSSDLSEA
SLLRAAAAVSTVKGGYSGTLAAAPARTNRHLYGDENPIPSPSFEAKAKLLQEIDAWLRAEDPRVRQVTASLAASWQHVEI
VRADGQVVRDIRPLVRINVSVVVGDGDRQESGSYGMGGRKAFGDFLIEDSWKHAAREALRQALVNLEAIPAPAGTFDIVL
SSGWPGVMLHEAVGHGLEGDFNRKKTSAFAGLLGQQVAAKGVTVVDDGTIPERRGSLTVDDEGTPSARNVLIEDGKLVGY
MQDRQNARLMGMKATGNGRREGYAHQPMPRMTNTYMTSGDMEPDEIIASVKNGIYAVSFGGGQVDITSGKFVFGCTEAYM
IENGKVTQPIKGAMLIGNGPDAMHRVSMVGNDMKLDNGIGMCGKAGQGVPVGVGQPHLRMNQMTVGGTRV

Specific function: Suppresses The Inhibitory Activity Of The Carbon Storage Regulator (Csra). [C]

COG id: COG0312

COG function: function code R; Predicted Zn-dependent proteases and their inactivated homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U62 family [H]

Homologues:

Organism=Escherichia coli, GI1789640, Length=450, Percent_Identity=53.3333333333333, Blast_Score=463, Evalue=1e-132,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002510 [H]

Pfam domain/function: PF01523 PmbA_TldD [H]

EC number: NA

Molecular weight: Translated: 50119; Mature: 50119

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSLIGQFDISDDRIKQIVADTINGADDGELFLEYSESEALMFDNGRLKTANFNTDQGFG
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEECCEEEEECCCCCCCCC
LRAVAGEASGYAHSSDLSEASLLRAAAAVSTVKGGYSGTLAAAPARTNRHLYGDENPIPS
EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCC
PSFEAKAKLLQEIDAWLRAEDPRVRQVTASLAASWQHVEIVRADGQVVRDIRPLVRINVS
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCEEEEEEE
VVVGDGDRQESGSYGMGGRKAFGDFLIEDSWKHAAREALRQALVNLEAIPAPAGTFDIVL
EEECCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE
SSGWPGVMLHEAVGHGLEGDFNRKKTSAFAGLLGQQVAAKGVTVVDDGTIPERRGSLTVD
ECCCCCEEHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCEEEC
DEGTPSARNVLIEDGKLVGYMQDRQNARLMGMKATGNGRREGYAHQPMPRMTNTYMTSGD
CCCCCCCCEEEEECCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEECCC
MEPDEIIASVKNGIYAVSFGGGQVDITSGKFVFGCTEAYMIENGKVTQPIKGAMLIGNGP
CCHHHHHHHHHCCEEEEEECCCEEEEECCCEEEEECEEEEEECCCCCCCCCCEEEECCCC
DAMHRVSMVGNDMKLDNGIGMCGKAGQGVPVGVGQPHLRMNQMTVGGTRV
HHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCC
>Mature Secondary Structure
MNSLIGQFDISDDRIKQIVADTINGADDGELFLEYSESEALMFDNGRLKTANFNTDQGFG
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEECCEEEEECCCCCCCCC
LRAVAGEASGYAHSSDLSEASLLRAAAAVSTVKGGYSGTLAAAPARTNRHLYGDENPIPS
EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCC
PSFEAKAKLLQEIDAWLRAEDPRVRQVTASLAASWQHVEIVRADGQVVRDIRPLVRINVS
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCEEEEEEE
VVVGDGDRQESGSYGMGGRKAFGDFLIEDSWKHAAREALRQALVNLEAIPAPAGTFDIVL
EEECCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE
SSGWPGVMLHEAVGHGLEGDFNRKKTSAFAGLLGQQVAAKGVTVVDDGTIPERRGSLTVD
ECCCCCEEHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCEEEC
DEGTPSARNVLIEDGKLVGYMQDRQNARLMGMKATGNGRREGYAHQPMPRMTNTYMTSGD
CCCCCCCCEEEEECCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEECCC
MEPDEIIASVKNGIYAVSFGGGQVDITSGKFVFGCTEAYMIENGKVTQPIKGAMLIGNGP
CCHHHHHHHHHCCEEEEEECCCEEEEECCCEEEEECEEEEEECCCCCCCCCCEEEECCCC
DAMHRVSMVGNDMKLDNGIGMCGKAGQGVPVGVGQPHLRMNQMTVGGTRV
HHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]