| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13476221
Identifier: 13476221
GI number: 13476221
Start: 6181668
End: 6182429
Strand: Reverse
Name: 13476221
Synonym: mll7484
Alternate gene names: NA
Gene position: 6182429-6181668 (Counterclockwise)
Preceding gene: 13476222
Following gene: 13476216
Centisome position: 87.87
GC content: 60.63
Gene sequence:
>762_bases ATGCCGCGCCGTCGCCACATTACCTTTGACCGGTGCTCTCGTGCGGTGGTGTTGCCAGTGCTGCGTTCCCTCGGCGTCCT GACTTCCTCTTTCCTGCTGGGTTGTGTTTCGCTGATCGGCGCAACCTCGCTGGATGTCAGCCCGGCGTCAGCGCAATCCA CCCTGCCCAAGCAGTCGACATTGTTCGGGAAGACGCAGCCATCCACGGCTGGGTCACTCAGCGTCGCGGTTGGCGGCCCC ACCAGCGTCCCCTACGGCTGGGTGGATTTCTGCCATCGCCGGCCAAAAGAGTGCAGGGTCCCTGCGCTGCCGGCCACGAA TGTCAAGCTGACGGCGCAGAACTTGCGCACTCTGAAGCGGATAAATCAGAAGGCGAACAGTTCCATCAAGCCCGTCAGCA ATTTCGACCACTGGGGCACGATGGCCGACCATTGGGATTACCCGGTTGACGGCAAGGGCGACTGCAAGATCTACGCACTC TACAAGCGCAAGCTTCTTCAGGAGGCTGGATTTCCCCGGCAGGCGCTGCTGATGACAGTGGTGCACGACCTCGACAATGA AGGCCACACCATCCTGACGGTGAAAACCGACAAGGGCGATCTGGTCCTCGACAATCTGGTCGACGAAATCAGGCCGTGGA ACGCGACCGGCTACTACTTCGTGAAACGCCAGTCGCAGCAGAACCCGAATATCTGGGTGTCGATCAACCGGCGGGGCGGT ACGCCGCAAACCCTCACGAACGTTGCCAAGCTCGTAGACTGA
Upstream 100 bases:
>100_bases GTGTGCGATGACGGCCTAGCGCACTGCCTTGTGCCGGCGCGACGGCGCGTTCGCAGGCCGCGAACACGAACATGTTAACG CCTTCTTAAATGTTTAATTG
Downstream 100 bases:
>100_bases GCAACCTTTCACCGCAGCGGTCCAGGCGCCAGACCCAGCTCAAGACGAAAACCCGATTCATATTTTGGGGAACTGCCGCC AGCCTCCTCGCCAGGGCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: Transglutaminase-Like Cysteine Peptidase BTLCP; Transglutaminase Family Protein Cysteine Peptidase Btlcp; Periplasmic Protein-Like Protein; And 4.1 Domain Protein; Peptide Signal; Signal Peptide; Transglutaminase Cysteine Peptidase BTLCP; Transglutaminase-Like Cysteine Peptidase; Transglutaminase-Like Protein; Bacterial Transglutaminase-Like Cysteine Peptidase
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MPRRRHITFDRCSRAVVLPVLRSLGVLTSSFLLGCVSLIGATSLDVSPASAQSTLPKQSTLFGKTQPSTAGSLSVAVGGP TSVPYGWVDFCHRRPKECRVPALPATNVKLTAQNLRTLKRINQKANSSIKPVSNFDHWGTMADHWDYPVDGKGDCKIYAL YKRKLLQEAGFPRQALLMTVVHDLDNEGHTILTVKTDKGDLVLDNLVDEIRPWNATGYYFVKRQSQQNPNIWVSINRRGG TPQTLTNVAKLVD
Sequences:
>Translated_253_residues MPRRRHITFDRCSRAVVLPVLRSLGVLTSSFLLGCVSLIGATSLDVSPASAQSTLPKQSTLFGKTQPSTAGSLSVAVGGP TSVPYGWVDFCHRRPKECRVPALPATNVKLTAQNLRTLKRINQKANSSIKPVSNFDHWGTMADHWDYPVDGKGDCKIYAL YKRKLLQEAGFPRQALLMTVVHDLDNEGHTILTVKTDKGDLVLDNLVDEIRPWNATGYYFVKRQSQQNPNIWVSINRRGG TPQTLTNVAKLVD >Mature_252_residues PRRRHITFDRCSRAVVLPVLRSLGVLTSSFLLGCVSLIGATSLDVSPASAQSTLPKQSTLFGKTQPSTAGSLSVAVGGPT SVPYGWVDFCHRRPKECRVPALPATNVKLTAQNLRTLKRINQKANSSIKPVSNFDHWGTMADHWDYPVDGKGDCKIYALY KRKLLQEAGFPRQALLMTVVHDLDNEGHTILTVKTDKGDLVLDNLVDEIRPWNATGYYFVKRQSQQNPNIWVSINRRGGT PQTLTNVAKLVD
Specific function: Unknown
COG id: COG3672
COG function: function code S; Predicted periplasmic protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27981; Mature: 27850
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRRRHITFDRCSRAVVLPVLRSLGVLTSSFLLGCVSLIGATSLDVSPASAQSTLPKQST CCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCHH LFGKTQPSTAGSLSVAVGGPTSVPYGWVDFCHRRPKECRVPALPATNVKLTAQNLRTLKR HCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHH INQKANSSIKPVSNFDHWGTMADHWDYPVDGKGDCKIYALYKRKLLQEAGFPRQALLMTV HHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCEEEEHHHHHHHHHHCCCCHHHHHHHH VHDLDNEGHTILTVKTDKGDLVLDNLVDEIRPWNATGYYFVKRQSQQNPNIWVSINRRGG HHHCCCCCCEEEEEECCCCCEEHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEECCCC TPQTLTNVAKLVD CHHHHHHHHHHCC >Mature Secondary Structure PRRRHITFDRCSRAVVLPVLRSLGVLTSSFLLGCVSLIGATSLDVSPASAQSTLPKQST CCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCHH LFGKTQPSTAGSLSVAVGGPTSVPYGWVDFCHRRPKECRVPALPATNVKLTAQNLRTLKR HCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHH INQKANSSIKPVSNFDHWGTMADHWDYPVDGKGDCKIYALYKRKLLQEAGFPRQALLMTV HHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCEEEEHHHHHHHHHHCCCCHHHHHHHH VHDLDNEGHTILTVKTDKGDLVLDNLVDEIRPWNATGYYFVKRQSQQNPNIWVSINRRGG HHHCCCCCCEEEEEECCCCCEEHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEECCCC TPQTLTNVAKLVD CHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA