Click here to switch to the map view.

The map label for this gene is uidR [C]

Identifier: 13476207

GI number: 13476207

Start: 6168213

End: 6168821

Strand: Direct

Name: uidR [C]

Synonym: mlr7466

Alternate gene names: 13476207

Gene position: 6168213-6168821 (Clockwise)

Preceding gene: 13476205

Following gene: 13476208

Centisome position: 87.67

GC content: 63.05

Gene sequence:

>609_bases
ATGCACAGACCCCGCAAGGAAATGATCGCCGAAACGCGCGCCAAGCTGATCGCCGCGGCCCGCCAGGCCTTTGGCACGAT
CGGATATGCCGAAGCGTCGATGGATGATTTCACGGCATCGGCCGGGCTGACGCGCGGCGCCCTCTATCACCATTTTGGCG
ACAAGAAAGGACTGCTGGAGGCGGTTATCGCCGAAATCGACGGCGAGATGGCGGCCCGGGTGAATGAGGTGGCGTCGAGA
GCGCCGACCCGCTGGCAGCATTTCGTCGACGAATGCACGACCTATATTGAAATGGCGCTGGAGCCGGAAATCCAGCGCAT
CATATTCCGCGACGGTCCGGCCGTGCTGGGCGATCCGGCGCAATGGTCGAATGCCAATGCCTGCGTCGGCTCAATGACCG
ATCATCTGACCGCGCTGCAGCGGGAGGGGGTGGTCGTCCCGGGCGTCGACCCCGAGACCGCCGCACGGCTGATCAACGGG
GCGAGCAGCCAGGCGGCGCAGCGGATCGCCAATTCGAACGACCCCGAAGCGACGTCGAAGATCGTGGTTGCAGCGTTCAA
GCAACTGCTCGAGGGACTGCTCAGAAAACCAGCTTCGCAACAGAACTAA

Upstream 100 bases:

>100_bases
CGGTTTGACAATTACATACGAAGCGTATGAGGATTAGATAGAGCATACGTCGCGTATGTCAATTGGCATACGAAGCGTAT
GTGAATAGGACCAGACGGAA

Downstream 100 bases:

>100_bases
AACCCCCGTCGGGCGCTCCGCTAATCACAGCCCGCGATTGACAATCCCGGGGGTGAGCGCATCCTTCCCAGCCATCTCTG
AGGGGAGATTCGGGCATGTG

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; TetR Family Transcriptional Regulatory Protein; Regulatory Protein TetR; Transcriptional Regulator Protein TetR Family; Transcriptional Regulator Protein; TetR Family Regulatory Protein; Transposon; TetR-Type Transcriptional Regulator; TRANSCRIPTIONal REGULATOR TetR Family; TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MHRPRKEMIAETRAKLIAAARQAFGTIGYAEASMDDFTASAGLTRGALYHHFGDKKGLLEAVIAEIDGEMAARVNEVASR
APTRWQHFVDECTTYIEMALEPEIQRIIFRDGPAVLGDPAQWSNANACVGSMTDHLTALQREGVVVPGVDPETAARLING
ASSQAAQRIANSNDPEATSKIVVAAFKQLLEGLLRKPASQQN

Sequences:

>Translated_202_residues
MHRPRKEMIAETRAKLIAAARQAFGTIGYAEASMDDFTASAGLTRGALYHHFGDKKGLLEAVIAEIDGEMAARVNEVASR
APTRWQHFVDECTTYIEMALEPEIQRIIFRDGPAVLGDPAQWSNANACVGSMTDHLTALQREGVVVPGVDPETAARLING
ASSQAAQRIANSNDPEATSKIVVAAFKQLLEGLLRKPASQQN
>Mature_202_residues
MHRPRKEMIAETRAKLIAAARQAFGTIGYAEASMDDFTASAGLTRGALYHHFGDKKGLLEAVIAEIDGEMAARVNEVASR
APTRWQHFVDECTTYIEMALEPEIQRIIFRDGPAVLGDPAQWSNANACVGSMTDHLTALQREGVVVPGVDPETAARLING
ASSQAAQRIANSNDPEATSKIVVAAFKQLLEGLLRKPASQQN

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21827; Mature: 21827

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRPRKEMIAETRAKLIAAARQAFGTIGYAEASMDDFTASAGLTRGALYHHFGDKKGLLE
CCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHH
AVIAEIDGEMAARVNEVASRAPTRWQHFVDECTTYIEMALEPEIQRIIFRDGPAVLGDPA
HHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCC
QWSNANACVGSMTDHLTALQREGVVVPGVDPETAARLINGASSQAAQRIANSNDPEATSK
CCCCCCHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHCCCHHHHHHHHHCCCCCHHHHH
IVVAAFKQLLEGLLRKPASQQN
HHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MHRPRKEMIAETRAKLIAAARQAFGTIGYAEASMDDFTASAGLTRGALYHHFGDKKGLLE
CCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHH
AVIAEIDGEMAARVNEVASRAPTRWQHFVDECTTYIEMALEPEIQRIIFRDGPAVLGDPA
HHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCC
QWSNANACVGSMTDHLTALQREGVVVPGVDPETAARLINGASSQAAQRIANSNDPEATSK
CCCCCCHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHCCCHHHHHHHHHCCCCCHHHHH
IVVAAFKQLLEGLLRKPASQQN
HHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA