| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13476206
Identifier: 13476206
GI number: 13476206
Start: 6166870
End: 6168093
Strand: Reverse
Name: 13476206
Synonym: mll7465
Alternate gene names: NA
Gene position: 6168093-6166870 (Counterclockwise)
Preceding gene: 13476209
Following gene: 13476202
Centisome position: 87.66
GC content: 66.5
Gene sequence:
>1224_bases ATGCAGAACCCCTATTCGGAAATTTTCCGCGCCCCTGGAGCCAAGGGCTTTGCAGCCGCCGGCTTCATGGCGCGCCTCCC GATCGCCATGGCGCCGATCGGCATCGTGGCAATGCTGTCGCAGACGCGCGGCGAATACTGGCTGGCGGGCGCTGTCTCGG CGACATTCGCGCTTGCCAACGCATTCCTGGCGCCGCAGATATCAAGACTGGTCGACCGCCTTGGCCAGACGCGGATCGTC GTGCCCACGACAATCATCTCCGTGCTCGCCTTCATCACGCTGGTTTCGGCCGCCAATCAGGACTGGCCGGTCTGGACGCT GTTCGTGTCGGCGCTGCTGGCGGCGGCCATGCCCAGTATGCCTGCCATGGTGCGCGCGCGCTGGACCGAGCTTTTCCGGG GCCAGCCCGAGATGAACACCGCTTTCGCCTTCGAATCGGCGGCGGATGAACTGGTCTATATCGCCGGGGCATCGCTGTCG GTCGGCCTCAGCGCCGCCCTGTTCCCGGAAGCAGGCATGCTGGCGAGCACACTGTTCCTCGCCTTGGGCTCGACCGCGTT CATCCTGCAGAGATCGACCGAGCCGCAAGTGCGCCCGGTGGACCATGGCTCGAGCGGCTCGGCGATCCGCCTGCGGCCAG TGCAGATCATCACCTTTGCCCTGATCTTCATCGGCGCCACCTTCGCGACGACGGAAGTGAGCACGGTGGCCATCACAAAA GAGCTCGGCCAGCCCGGCGCCGCCAGCCTCGTCATCGGCGTCTACGCGCTGGGGTCGTTCGTGCTCGGCATCATTGTCGG CGCGCTCAACCTGAAGGCACCGCTGCAACGCCAGCTTGCCATCGCGGTCGCCCTCGTCACGCTCGGCACGCTGCTGCCGC TCACCGCCAGCAGCGTGCCGCTTCTGGCGCTGACTGTCTTCATCAGCGGCGTGGCGATCTCGCCAACCTTCATTACGGCC TTCGGCCTGATCGAACGGCATGTGCCCGAAGCGATGCTGACCGAGGGCATCACCTGGGTGACCACCGGGATCGGCATCGG CATGGCGCTGGGCTCCTTCGCCGCGGGCGCCGTGGTGGATGCGTTCGGCGCCCAGAACGGGTTCTGGGTCTCGGTGGCAT CAGGCACGATCGCGCTCGCCACCGTGCTGCTCGGCCAGCGCATCCTGGCCACCCACAAATGCGACATGGACGGATGCGAA GCAGCCGCCGTTCCCGCGGAATAG
Upstream 100 bases:
>100_bases CATACGCTTCGTATGCCAATTGACATACGCGACGTATGCTCTATCTAATCCTCATACGCTTCGTATGTAATTGTCAAACC GTCCTTTGTCGAGGAACCCC
Downstream 100 bases:
>100_bases CGCGCTCGGCTCCTGCTGCGGGCCGGGTGTTCCGCCCTATGCGGCAGGATCGGAAATACGCATCCAGTGCGGTCGTGGCA GCGCGAAAAGCATCGTTGGC
Product: ABC transporter, permease protein
Products: NA
Alternate protein names: Facilitator Transporter; Facilitator Superfamily Protein; ABC Transporter Permease; ABC Transporter; ABC Transporter Permease Protein; Transmembrane Transporter; Facilitator Superfamily Permease; Facilitator Superfamily Transporter Permease; MFS Family Transmembrane Protein; Arabinose Efflux Permease Family Protein; ABC Transporter Integral Membrane Protein; Permease; Mfs Transporter; LOW QUALITY PROTEIN MFS Superfamily Transporter; Facilitator MFS1 Protein; Transporter Transmembrane Subunit; Transporter-Like Membrane Protein; Efflux Protein; Integral Membrane Protein; Permease Of Facilitator Superfamily; Transporter Facilitator Family Protein; MFS Family Transporter; ABC Transporter Membrane Spanning Protein; MFS Superfamily Transporter
Number of amino acids: Translated: 407; Mature: 407
Protein sequence:
>407_residues MQNPYSEIFRAPGAKGFAAAGFMARLPIAMAPIGIVAMLSQTRGEYWLAGAVSATFALANAFLAPQISRLVDRLGQTRIV VPTTIISVLAFITLVSAANQDWPVWTLFVSALLAAAMPSMPAMVRARWTELFRGQPEMNTAFAFESAADELVYIAGASLS VGLSAALFPEAGMLASTLFLALGSTAFILQRSTEPQVRPVDHGSSGSAIRLRPVQIITFALIFIGATFATTEVSTVAITK ELGQPGAASLVIGVYALGSFVLGIIVGALNLKAPLQRQLAIAVALVTLGTLLPLTASSVPLLALTVFISGVAISPTFITA FGLIERHVPEAMLTEGITWVTTGIGIGMALGSFAAGAVVDAFGAQNGFWVSVASGTIALATVLLGQRILATHKCDMDGCE AAAVPAE
Sequences:
>Translated_407_residues MQNPYSEIFRAPGAKGFAAAGFMARLPIAMAPIGIVAMLSQTRGEYWLAGAVSATFALANAFLAPQISRLVDRLGQTRIV VPTTIISVLAFITLVSAANQDWPVWTLFVSALLAAAMPSMPAMVRARWTELFRGQPEMNTAFAFESAADELVYIAGASLS VGLSAALFPEAGMLASTLFLALGSTAFILQRSTEPQVRPVDHGSSGSAIRLRPVQIITFALIFIGATFATTEVSTVAITK ELGQPGAASLVIGVYALGSFVLGIIVGALNLKAPLQRQLAIAVALVTLGTLLPLTASSVPLLALTVFISGVAISPTFITA FGLIERHVPEAMLTEGITWVTTGIGIGMALGSFAAGAVVDAFGAQNGFWVSVASGTIALATVLLGQRILATHKCDMDGCE AAAVPAE >Mature_407_residues MQNPYSEIFRAPGAKGFAAAGFMARLPIAMAPIGIVAMLSQTRGEYWLAGAVSATFALANAFLAPQISRLVDRLGQTRIV VPTTIISVLAFITLVSAANQDWPVWTLFVSALLAAAMPSMPAMVRARWTELFRGQPEMNTAFAFESAADELVYIAGASLS VGLSAALFPEAGMLASTLFLALGSTAFILQRSTEPQVRPVDHGSSGSAIRLRPVQIITFALIFIGATFATTEVSTVAITK ELGQPGAASLVIGVYALGSFVLGIIVGALNLKAPLQRQLAIAVALVTLGTLLPLTASSVPLLALTVFISGVAISPTFITA FGLIERHVPEAMLTEGITWVTTGIGIGMALGSFAAGAVVDAFGAQNGFWVSVASGTIALATVLLGQRILATHKCDMDGCE AAAVPAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42195; Mature: 42195
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNPYSEIFRAPGAKGFAAAGFMARLPIAMAPIGIVAMLSQTRGEYWLAGAVSATFALAN CCCCHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHH AFLAPQISRLVDRLGQTRIVVPTTIISVLAFITLVSAANQDWPVWTLFVSALLAAAMPSM HHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC PAMVRARWTELFRGQPEMNTAFAFESAADELVYIAGASLSVGLSAALFPEAGMLASTLFL HHHHHHHHHHHHCCCCCCCHHHEEHHCCCCEEEEECCCHHHCCHHHHCCCCHHHHHHHHH ALGSTAFILQRSTEPQVRPVDHGSSGSAIRLRPVQIITFALIFIGATFATTEVSTVAITK HHCCCEEEEECCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHH ELGQPGAASLVIGVYALGSFVLGIIVGALNLKAPLQRQLAIAVALVTLGTLLPLTASSVP HHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCH LLALTVFISGVAISPTFITAFGLIERHVPEAMLTEGITWVTTGIGIGMALGSFAAGAVVD HHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHH AFGAQNGFWVSVASGTIALATVLLGQRILATHKCDMDGCEAAAVPAE HHCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MQNPYSEIFRAPGAKGFAAAGFMARLPIAMAPIGIVAMLSQTRGEYWLAGAVSATFALAN CCCCHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHH AFLAPQISRLVDRLGQTRIVVPTTIISVLAFITLVSAANQDWPVWTLFVSALLAAAMPSM HHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC PAMVRARWTELFRGQPEMNTAFAFESAADELVYIAGASLSVGLSAALFPEAGMLASTLFL HHHHHHHHHHHHCCCCCCCHHHEEHHCCCCEEEEECCCHHHCCHHHHCCCCHHHHHHHHH ALGSTAFILQRSTEPQVRPVDHGSSGSAIRLRPVQIITFALIFIGATFATTEVSTVAITK HHCCCEEEEECCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHH ELGQPGAASLVIGVYALGSFVLGIIVGALNLKAPLQRQLAIAVALVTLGTLLPLTASSVP HHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCH LLALTVFISGVAISPTFITAFGLIERHVPEAMLTEGITWVTTGIGIGMALGSFAAGAVVD HHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHH AFGAQNGFWVSVASGTIALATVLLGQRILATHKCDMDGCEAAAVPAE HHCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA