| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is fabI1 [H]
Identifier: 13476200
GI number: 13476200
Start: 6162013
End: 6162831
Strand: Direct
Name: fabI1 [H]
Synonym: mlr7458
Alternate gene names: 13476200
Gene position: 6162013-6162831 (Clockwise)
Preceding gene: 13476199
Following gene: 13476201
Centisome position: 87.58
GC content: 61.42
Gene sequence:
>819_bases ATGGCGGGTGGACAGGGCCTGATGGCCGGCAAGCGCGGCCTTATTCTTGGCATCGCGAACAACAGGTCGATTGCCTACGG CATCGCCAAGGCATGCGTCGACCATGGCGCCGAGATTGCGCTGACCTATCAGGGCGAGGCGTTCAAGAAGCGCGTCGAGC CGTTGGCGGCGGAACTGGGCGCCTTTGTCGCCGGCCATTGCGACGTCACCGATTCGGCGAGCCTCGACGAGGTTTTCGCC AATGTCGCCAAGCATTGGGGCAAGCTTGATTTCCTCGTCCATGCCATCGCCTTCTCCGACAAGGACGAACTGACCGGCCG CTATGTCGAGACGACGCGCGACAACTTCCTGCGCACCATGGACATTTCGGTGTTTTCCTTCACCACCATCGCCAAGCGTG CCGAGGCGCTGATGACCGAGGGCGGTTCATTGCTCACGCTGACCTACTACGGCGCCGAGAAGGTGATGCCGCACTACAAC GTCATGGGCGTCGCCAAGGCCGCGCTCGAAGCCAGCGTGCGTTATCTCGCCGTCGATCTCGGCGGCAAGAAGATCCGCGT CAACGCCATATCGGCCGGCCCGATCAAGACGCTGGCGGCCTCGGGCATCGGCGATTTCCGCTACATACTGAAGTGGAACG AATACAATTCGCCGCTGAAGCAGACGGTCACGCAGGAGGAGGTCGGCGATTCCGGCGTCTATTTCCTGTCCGACCTGTCG CGTGGCGTCACCGGTGAGGTGCACCATGTCGATTCCGGCTATCACGTGGTCGGTATGAAGGCGGTCGACGCGCCTGATAT TTCGACGGTCAAGGAATAA
Upstream 100 bases:
>100_bases CGCTCTTGTCCCCCGAACTGTCCGGTTTGAGCGCTTGAAGGGGCTGTGTGCCTGTGCGATAGGCACTCCACAAAGCACAA ACCTTGCGGAGAGCGCTCAC
Downstream 100 bases:
>100_bases CGCCCTCCGCTCATCCTCCGCCAAGGCCCTGGCCCGACCTCCGGAAGACCTGATGTACCCGCTGGTTTATATCGTGCGCC ACGGCCAGACCGCGTGGAAC
Product: enoyl-(acyl carrier protein) reductase
Products: NA
Alternate protein names: NADH-dependent enoyl-ACP reductase 1 [H]
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MAGGQGLMAGKRGLILGIANNRSIAYGIAKACVDHGAEIALTYQGEAFKKRVEPLAAELGAFVAGHCDVTDSASLDEVFA NVAKHWGKLDFLVHAIAFSDKDELTGRYVETTRDNFLRTMDISVFSFTTIAKRAEALMTEGGSLLTLTYYGAEKVMPHYN VMGVAKAALEASVRYLAVDLGGKKIRVNAISAGPIKTLAASGIGDFRYILKWNEYNSPLKQTVTQEEVGDSGVYFLSDLS RGVTGEVHHVDSGYHVVGMKAVDAPDISTVKE
Sequences:
>Translated_272_residues MAGGQGLMAGKRGLILGIANNRSIAYGIAKACVDHGAEIALTYQGEAFKKRVEPLAAELGAFVAGHCDVTDSASLDEVFA NVAKHWGKLDFLVHAIAFSDKDELTGRYVETTRDNFLRTMDISVFSFTTIAKRAEALMTEGGSLLTLTYYGAEKVMPHYN VMGVAKAALEASVRYLAVDLGGKKIRVNAISAGPIKTLAASGIGDFRYILKWNEYNSPLKQTVTQEEVGDSGVYFLSDLS RGVTGEVHHVDSGYHVVGMKAVDAPDISTVKE >Mature_271_residues AGGQGLMAGKRGLILGIANNRSIAYGIAKACVDHGAEIALTYQGEAFKKRVEPLAAELGAFVAGHCDVTDSASLDEVFAN VAKHWGKLDFLVHAIAFSDKDELTGRYVETTRDNFLRTMDISVFSFTTIAKRAEALMTEGGSLLTLTYYGAEKVMPHYNV MGVAKAALEASVRYLAVDLGGKKIRVNAISAGPIKTLAASGIGDFRYILKWNEYNSPLKQTVTQEEVGDSGVYFLSDLSR GVTGEVHHVDSGYHVVGMKAVDAPDISTVKE
Specific function: Fatty acid biosynthesis pathway; second reduction step. [C]
COG id: COG0623
COG function: function code I; Enoyl-[acyl-carrier-protein] reductase (NADH)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family. FabI subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787545, Length=259, Percent_Identity=50.1930501930502, Blast_Score=262, Evalue=2e-71, Organism=Escherichia coli, GI2367365, Length=251, Percent_Identity=29.8804780876494, Blast_Score=71, Evalue=9e-14, Organism=Escherichia coli, GI1789378, Length=263, Percent_Identity=27.7566539923954, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI87082100, Length=257, Percent_Identity=24.9027237354086, Blast_Score=61, Evalue=6e-11,
Paralogues:
None
Copy number: 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR014358 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.3.1.9 [H]
Molecular weight: Translated: 29214; Mature: 29082
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGGQGLMAGKRGLILGIANNRSIAYGIAKACVDHGAEIALTYQGEAFKKRVEPLAAELG CCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHH AFVAGHCDVTDSASLDEVFANVAKHWGKLDFLVHAIAFSDKDELTGRYVETTRDNFLRTM HHHCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHCCHHHHHHHHHHEEEE DISVFSFTTIAKRAEALMTEGGSLLTLTYYGAEKVMPHYNVMGVAKAALEASVRYLAVDL ECHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHCCCCCCHHHHHHHHHHHCEEEEEEEC GGKKIRVNAISAGPIKTLAASGIGDFRYILKWNEYNSPLKQTVTQEEVGDSGVYFLSDLS CCCEEEEEEECCCCHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCEEEEHHHC RGVTGEVHHVDSGYHVVGMKAVDAPDISTVKE CCCCCEEEEECCCEEEEEEEECCCCCCCCCCC >Mature Secondary Structure AGGQGLMAGKRGLILGIANNRSIAYGIAKACVDHGAEIALTYQGEAFKKRVEPLAAELG CCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHH AFVAGHCDVTDSASLDEVFANVAKHWGKLDFLVHAIAFSDKDELTGRYVETTRDNFLRTM HHHCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHCCHHHHHHHHHHEEEE DISVFSFTTIAKRAEALMTEGGSLLTLTYYGAEKVMPHYNVMGVAKAALEASVRYLAVDL ECHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHCCCCCCHHHHHHHHHHHCEEEEEEEC GGKKIRVNAISAGPIKTLAASGIGDFRYILKWNEYNSPLKQTVTQEEVGDSGVYFLSDLS CCCEEEEEEECCCCHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCEEEEHHHC RGVTGEVHHVDSGYHVVGMKAVDAPDISTVKE CCCCCEEEEECCCEEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]