Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13476161

Identifier: 13476161

GI number: 13476161

Start: 6124711

End: 6125895

Strand: Direct

Name: 13476161

Synonym: mlr7408

Alternate gene names: NA

Gene position: 6124711-6125895 (Clockwise)

Preceding gene: 13476160

Following gene: 13476162

Centisome position: 87.05

GC content: 62.36

Gene sequence:

>1185_bases
GTGCATCGACGCGTCTTGAAGCGGCTTGTTGCCGCCGCCGGTGAGAAGAAACGCAATTTTGTGTCTCCTTTCATCATCGG
CCTCGGCATCTGGATCGGCTTCCCGACCGTCGCCGCCTATCAGGACATGACCAGCCTCGTTTCAGGTCTCGAATCGCCGA
CCGCGCGCTGGAATTCCTATGTCGAAAGATCCGTCGCCGGTTCGACCCATGCCGCCGAGATGCCCTTCGTCGATTCCGAC
GTCACCGGCTCGATCTCCGGATCGGGCATTCACCTGGCTGGCGTCGGCAACGTGTCGTTTCGCGGCAAGGGCGGCAAGGT
CAGCGGCTCCCCGGACGAGGATCGCGTGGTGCGCGCCGACAAGAAGGGCCGCATCGTCCAGGTGTCTCCCGTTGCGCCGC
CGAAAAACTTCAACGCCGGTTCGATCTTCCAGCGGACCTCCTCCCTGATGCGGCCGAGCATGGACGGCGGCCTGAAGATG
GCTTTCGCCAAGCCTCAGATCAAAGGCAAGGAAATCCAGATCGCCGCGGAATTCCATGCGCGTGAGGACAAGAAGCCGGA
TCCCGGCGTGCCGGCCATGCTTGCCGCCCTGGTCAACAACGATCATCCCGATGTTCTGGCGACGGCCTATGCGCAATCCG
AGCCCGACTATGCCAAGGCCTCGCCCTTCGAAGCCCTGCTTCAGGATGAGCAGCCTAACAGCGGCCGCTTCATTCCGCCG
ATGGCCAAGGGCGACCATTCGTGGATCCAGAACCCGCTTCCGGCCAGCGTCTTCTCCAAGAAGGAACAGGCATGCCTGGC
CAATGGCATCTATTTCGAGGCCAGGAGCGAATCCGTTCGCGGCCAGGCCGCCGTTGCCCAGGTCATCCTCAACCGCGTCC
GCAACCCCGCCTATCCCAATTCGATCTGCGGCGTCGTCTACCAGAACGACAGCTGGTTCAACCGCTGCCAGTTCTCCTTC
GCCTGCGACGGCCGGAAGAAGCGCATCGAAAGCCCGGCCGCCTACAAGACCGCGCAGGACATCGCCATGGCCGTCACCGC
CGGCAAGATATTCATTCCCGAGGTCGGATCGTCGACCCACTACTATGCCCAATATGTCCATCCGGGCTGGGCGCGCACCA
TGCAGAAGATGACCAAGATCGGCCTGCATATCTTCTACCGCACCTATGGCGGCGGCTGGAGCTGA

Upstream 100 bases:

>100_bases
GCCGACTGAGAAAACCCGACCGATCCCGTTAACGTCCCATCAAGGTTAATGCATCATTTTGCTCTCCAGTGGGGTCAGTA
GCGTTCCTGGAGAGAGTTCC

Downstream 100 bases:

>100_bases
AGGCTCGCCAGCCGATGGTCTTTTCCATCGGCCACAGGCTCGATCAGGCAGCCATTGCCGGGAGGATTCGCGCAGCACGC
CCCCATCATCGCGACGGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: Cell Wall Hydrolase Family; SleB-Like Protein; Hydrolase; Cell Wall Hydrolase; Spore Cortex-Lytic; Cell Wall Hydrolase Domain Protein; Spore-Cortex-Lytic Prepeptide; Cell Wall Hydrolase Sleb; N-Acetylmuramoyl-L-Alanine Amidase; Cell Wall Hydrolase Domain-Containing Protein; Cell Wall Hydrolase Family Protein

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MHRRVLKRLVAAAGEKKRNFVSPFIIGLGIWIGFPTVAAYQDMTSLVSGLESPTARWNSYVERSVAGSTHAAEMPFVDSD
VTGSISGSGIHLAGVGNVSFRGKGGKVSGSPDEDRVVRADKKGRIVQVSPVAPPKNFNAGSIFQRTSSLMRPSMDGGLKM
AFAKPQIKGKEIQIAAEFHAREDKKPDPGVPAMLAALVNNDHPDVLATAYAQSEPDYAKASPFEALLQDEQPNSGRFIPP
MAKGDHSWIQNPLPASVFSKKEQACLANGIYFEARSESVRGQAAVAQVILNRVRNPAYPNSICGVVYQNDSWFNRCQFSF
ACDGRKKRIESPAAYKTAQDIAMAVTAGKIFIPEVGSSTHYYAQYVHPGWARTMQKMTKIGLHIFYRTYGGGWS

Sequences:

>Translated_394_residues
MHRRVLKRLVAAAGEKKRNFVSPFIIGLGIWIGFPTVAAYQDMTSLVSGLESPTARWNSYVERSVAGSTHAAEMPFVDSD
VTGSISGSGIHLAGVGNVSFRGKGGKVSGSPDEDRVVRADKKGRIVQVSPVAPPKNFNAGSIFQRTSSLMRPSMDGGLKM
AFAKPQIKGKEIQIAAEFHAREDKKPDPGVPAMLAALVNNDHPDVLATAYAQSEPDYAKASPFEALLQDEQPNSGRFIPP
MAKGDHSWIQNPLPASVFSKKEQACLANGIYFEARSESVRGQAAVAQVILNRVRNPAYPNSICGVVYQNDSWFNRCQFSF
ACDGRKKRIESPAAYKTAQDIAMAVTAGKIFIPEVGSSTHYYAQYVHPGWARTMQKMTKIGLHIFYRTYGGGWS
>Mature_394_residues
MHRRVLKRLVAAAGEKKRNFVSPFIIGLGIWIGFPTVAAYQDMTSLVSGLESPTARWNSYVERSVAGSTHAAEMPFVDSD
VTGSISGSGIHLAGVGNVSFRGKGGKVSGSPDEDRVVRADKKGRIVQVSPVAPPKNFNAGSIFQRTSSLMRPSMDGGLKM
AFAKPQIKGKEIQIAAEFHAREDKKPDPGVPAMLAALVNNDHPDVLATAYAQSEPDYAKASPFEALLQDEQPNSGRFIPP
MAKGDHSWIQNPLPASVFSKKEQACLANGIYFEARSESVRGQAAVAQVILNRVRNPAYPNSICGVVYQNDSWFNRCQFSF
ACDGRKKRIESPAAYKTAQDIAMAVTAGKIFIPEVGSSTHYYAQYVHPGWARTMQKMTKIGLHIFYRTYGGGWS

Specific function: Unknown

COG id: COG3773

COG function: function code M; Cell wall hydrolyses involved in spore germination

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42902; Mature: 42902

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRRVLKRLVAAAGEKKRNFVSPFIIGLGIWIGFPTVAAYQDMTSLVSGLESPTARWNSY
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHH
VERSVAGSTHAAEMPFVDSDVTGSISGSGIHLAGVGNVSFRGKGGKVSGSPDEDRVVRAD
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEECCCCCCCCCCCCCCEEEEC
KKGRIVQVSPVAPPKNFNAGSIFQRTSSLMRPSMDGGLKMAFAKPQIKGKEIQIAAEFHA
CCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEEEECC
REDKKPDPGVPAMLAALVNNDHPDVLATAYAQSEPDYAKASPFEALLQDEQPNSGRFIPP
CCCCCCCCCHHHHHHHHHCCCCCCCEEEHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCC
MAKGDHSWIQNPLPASVFSKKEQACLANGIYFEARSESVRGQAAVAQVILNRVRNPAYPN
CCCCCHHHHCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCC
SICGVVYQNDSWFNRCQFSFACDGRKKRIESPAAYKTAQDIAMAVTAGKIFIPEVGSSTH
CEEEEEECCCCCHHHEEEEEEECCHHHHCCCCHHHHHHHHHHHHEECCEEEEECCCCCCE
YYAQYVHPGWARTMQKMTKIGLHIFYRTYGGGWS
EEEEECCCHHHHHHHHHHHHHHEEEEEECCCCCC
>Mature Secondary Structure
MHRRVLKRLVAAAGEKKRNFVSPFIIGLGIWIGFPTVAAYQDMTSLVSGLESPTARWNSY
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHH
VERSVAGSTHAAEMPFVDSDVTGSISGSGIHLAGVGNVSFRGKGGKVSGSPDEDRVVRAD
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEECCCCCCCCCCCCCCEEEEC
KKGRIVQVSPVAPPKNFNAGSIFQRTSSLMRPSMDGGLKMAFAKPQIKGKEIQIAAEFHA
CCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEEEECC
REDKKPDPGVPAMLAALVNNDHPDVLATAYAQSEPDYAKASPFEALLQDEQPNSGRFIPP
CCCCCCCCCHHHHHHHHHCCCCCCCEEEHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCC
MAKGDHSWIQNPLPASVFSKKEQACLANGIYFEARSESVRGQAAVAQVILNRVRNPAYPN
CCCCCHHHHCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCC
SICGVVYQNDSWFNRCQFSFACDGRKKRIESPAAYKTAQDIAMAVTAGKIFIPEVGSSTH
CEEEEEECCCCCHHHEEEEEEECCHHHHCCCCHHHHHHHHHHHHEECCEEEEECCCCCCE
YYAQYVHPGWARTMQKMTKIGLHIFYRTYGGGWS
EEEEECCCHHHHHHHHHHHHHHEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA