| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13476157
Identifier: 13476157
GI number: 13476157
Start: 6120049
End: 6120714
Strand: Direct
Name: 13476157
Synonym: mlr7403
Alternate gene names: NA
Gene position: 6120049-6120714 (Clockwise)
Preceding gene: 13476155
Following gene: 13476158
Centisome position: 86.98
GC content: 66.97
Gene sequence:
>666_bases ATGTCCGACGACAGTTTTATCCGTGAAGTCAACGACGAGATGCGTCGCGAGCAGGCGCAGAAGCTGTGGGACCGTTTCGG CCCGGCCTTGCTCGGCATTGCGATCCTCGTGGTGCTCGGCACCGCCGCCTTCGTCGGCTATCGCTATTGGGACGAGACGC GCGCCAACCGCTCCGGCGATGCCTTCTCGCAGGCCTTGAAACTGGCCAATGACGGCAAGAACGACGATGCGCTGGCCGCG CTCGACCAGCTGGAAAAGGATGGCTACGGCGCCTATCCGCTGCTTGCCCGCATGCGCGCCGCCACCGTCAAGGCGAGCAA GGGCGACACCGCCGCCGCCGTCAAGGATTTCGACGACGTCGCCGCCGACACCGCCATCCCCCAGGGCATTCGCGATATGG CGCGGCTCAGGGCAGCGCTCCTGCTCGTCGACCACGGCTCCTTCGCCGACGTGTCCAGCCGCGTCGAGGCGCTGACATCG GACACCAACACGCTGCGCCACACGGCGCGCGAGGCGCTCGGCCTTGCCGCCTGGAAGGAAGGCAAGACCCAGGACGCGTT GAAACTGTTCGACCAGATCGCCGCCGATGACGGCGCCCCGCGCAACACCCGCGAGCGGGCAACGCTGATGTCCGAGCTGA TCCGCGGCTCAGGCAATGCCTCGTAA
Upstream 100 bases:
>100_bases ATAGGCGATTTTCCGGCCGAACCCCTTCCATGCCGACAAAATTTCGCTAAAACGCGGGCTCATGAACCGCCCCGGCCCGG GGCAAAAGTGGTTTTGATTG
Downstream 100 bases:
>100_bases ATGCATGTCGCCCAAAAGTGTGCAGCGGTTTTGGGACGTCGACATGCATGATTGTAGGACCGTATGACCTTCAAAGTCGC CATCATCGGCAGACCTAACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 221; Mature: 220
Protein sequence:
>221_residues MSDDSFIREVNDEMRREQAQKLWDRFGPALLGIAILVVLGTAAFVGYRYWDETRANRSGDAFSQALKLANDGKNDDALAA LDQLEKDGYGAYPLLARMRAATVKASKGDTAAAVKDFDDVAADTAIPQGIRDMARLRAALLLVDHGSFADVSSRVEALTS DTNTLRHTAREALGLAAWKEGKTQDALKLFDQIAADDGAPRNTRERATLMSELIRGSGNAS
Sequences:
>Translated_221_residues MSDDSFIREVNDEMRREQAQKLWDRFGPALLGIAILVVLGTAAFVGYRYWDETRANRSGDAFSQALKLANDGKNDDALAA LDQLEKDGYGAYPLLARMRAATVKASKGDTAAAVKDFDDVAADTAIPQGIRDMARLRAALLLVDHGSFADVSSRVEALTS DTNTLRHTAREALGLAAWKEGKTQDALKLFDQIAADDGAPRNTRERATLMSELIRGSGNAS >Mature_220_residues SDDSFIREVNDEMRREQAQKLWDRFGPALLGIAILVVLGTAAFVGYRYWDETRANRSGDAFSQALKLANDGKNDDALAAL DQLEKDGYGAYPLLARMRAATVKASKGDTAAAVKDFDDVAADTAIPQGIRDMARLRAALLLVDHGSFADVSSRVEALTSD TNTLRHTAREALGLAAWKEGKTQDALKLFDQIAADDGAPRNTRERATLMSELIRGSGNAS
Specific function: Unknown
COG id: COG4649
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23948; Mature: 23817
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDDSFIREVNDEMRREQAQKLWDRFGPALLGIAILVVLGTAAFVGYRYWDETRANRSGD CCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH AFSQALKLANDGKNDDALAALDQLEKDGYGAYPLLARMRAATVKASKGDTAAAVKDFDDV HHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH AADTAIPQGIRDMARLRAALLLVDHGSFADVSSRVEALTSDTNTLRHTAREALGLAAWKE HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC GKTQDALKLFDQIAADDGAPRNTRERATLMSELIRGSGNAS CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SDDSFIREVNDEMRREQAQKLWDRFGPALLGIAILVVLGTAAFVGYRYWDETRANRSGD CCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH AFSQALKLANDGKNDDALAALDQLEKDGYGAYPLLARMRAATVKASKGDTAAAVKDFDDV HHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH AADTAIPQGIRDMARLRAALLLVDHGSFADVSSRVEALTSDTNTLRHTAREALGLAAWKE HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC GKTQDALKLFDQIAADDGAPRNTRERATLMSELIRGSGNAS CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA