| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13476133
Identifier: 13476133
GI number: 13476133
Start: 6097040
End: 6098197
Strand: Reverse
Name: 13476133
Synonym: mll7369
Alternate gene names: NA
Gene position: 6098197-6097040 (Counterclockwise)
Preceding gene: 13476134
Following gene: 13476131
Centisome position: 86.67
GC content: 65.03
Gene sequence:
>1158_bases ATGACAAACATGACGTTTCTGCCTGACGATGGCGTCTTTCTCGGCCGCGCTCGATCGCCTGATGTGCCCCATCCCCTGAT CGTCACGGTGCGTGACGGCACCGTCTTCGACATCACGTCGAGCGCGGCACCGACCGTGCGGGACATCTGCGAGATGGCCG ATCCGGCAGGGCATGTGCGCTCGGCCAAGGGCAAGCCGATCGGCTCGCTCGACGACATCGCGGCCAACAGTTTTCAGACC AGCCGCGATCCGGCAAAGCCCTATCTCCTCTCCCCGGTCGACCTGCAGGCGGTCAAGGCATCGGGCGTCACCTTCGTCGT GAGCCTGCTCGAGCGGGTGATCGAGGAGCAGGCGCGCGGCTCGGCGGAAAAGGCCGACGCCATCCGCGCCGACATTGCCG GGCTGATCGGCCATGATTTGTCGAAGCTCAAGCCCGGTTCGCCGGAAGCCATGGAGATCAAGGCCAAGCTGATCGCGCGC GGCGCCTGGTCGCAATATCTGGAAGTCGGCATCGGCCCCGACGCCGAGATCTTCACCAAGTGCCAGCCGATGGCCTCGGT CGGCTTCGGCGCCGATGTCGGCCTGCACCCGGTGTCGACCTGGAACAATCCGGAGCCGGAGATTGCCATGATCGCCGCGT CGAGCGGTAGGATCGTCGGCGCCACCATCGGCAACGACGTCAATCTGCGCGATGTCGAAGGGCGCTCCGCCCTGCTGCTC GGCAAGGCCAAGGACAACAATGCTTCGGCGTCACTTGGACCCTTCATCCGACTGTTCGACGACACCTTCTCGATCGACGA CGTGAAGCGCGCCGTGGTGCGCCTCAAGGTCGAGGGCGAGGATGGCTTCTCGCTGGAGGGCGCGAGCTCGATGGCCGAGA TCAGCCGTTCGCCGGAAGAGCTGGTTGCCGCGGCCATAGGCCCGCACCACCAGTATCCGGACGGGCTGGCGCTCTATCTC GGCACCATGTTCGTGCCGTCGAAGGACCGCGGCGAAAAGGGCAAGGGGTTTACCCACAAGGTCGGCGACATCGTCACCAT CTCGTCGGAAAAATTCGGCGCGCTGGTCAACCGGGTGCGGCTGTCGCCCGACTGCCCGCACTGGACCTACGGCGCCAGCC ATCTCATGCGCGACCTGGCAAAGGCCGATCTGATCTAA
Upstream 100 bases:
>100_bases CCGTCTGTCGCTTGGCACATGCTGCTTCAGGGCGTGTCGACTTGAAGAGACCATGCGCACCACATAACAGTGAACCATCC TGCGTAATGACGAGAGTGCA
Downstream 100 bases:
>100_bases GAAACCTGTCCAAAACGCCATGACCTTGCTTGGTGTGGATGCCATCCGGGTCGCCTTCACCACCGGTGCTCTGGTCCTGC TTGCCTTGGCGATCGACCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Fumarylacetoacetate Hydrolase Family Protein; Fumarylacetoacetase Family Protein; Fumarylacetoacetate Hydrolase Family Protein-Like Protein; 2-Hydroxyhepta-2 4-Diene-1 7-Dioate Isomaerase; 2-Keto-3-Deoxyxylonate Dehydratase
Number of amino acids: Translated: 385; Mature: 384
Protein sequence:
>385_residues MTNMTFLPDDGVFLGRARSPDVPHPLIVTVRDGTVFDITSSAAPTVRDICEMADPAGHVRSAKGKPIGSLDDIAANSFQT SRDPAKPYLLSPVDLQAVKASGVTFVVSLLERVIEEQARGSAEKADAIRADIAGLIGHDLSKLKPGSPEAMEIKAKLIAR GAWSQYLEVGIGPDAEIFTKCQPMASVGFGADVGLHPVSTWNNPEPEIAMIAASSGRIVGATIGNDVNLRDVEGRSALLL GKAKDNNASASLGPFIRLFDDTFSIDDVKRAVVRLKVEGEDGFSLEGASSMAEISRSPEELVAAAIGPHHQYPDGLALYL GTMFVPSKDRGEKGKGFTHKVGDIVTISSEKFGALVNRVRLSPDCPHWTYGASHLMRDLAKADLI
Sequences:
>Translated_385_residues MTNMTFLPDDGVFLGRARSPDVPHPLIVTVRDGTVFDITSSAAPTVRDICEMADPAGHVRSAKGKPIGSLDDIAANSFQT SRDPAKPYLLSPVDLQAVKASGVTFVVSLLERVIEEQARGSAEKADAIRADIAGLIGHDLSKLKPGSPEAMEIKAKLIAR GAWSQYLEVGIGPDAEIFTKCQPMASVGFGADVGLHPVSTWNNPEPEIAMIAASSGRIVGATIGNDVNLRDVEGRSALLL GKAKDNNASASLGPFIRLFDDTFSIDDVKRAVVRLKVEGEDGFSLEGASSMAEISRSPEELVAAAIGPHHQYPDGLALYL GTMFVPSKDRGEKGKGFTHKVGDIVTISSEKFGALVNRVRLSPDCPHWTYGASHLMRDLAKADLI >Mature_384_residues TNMTFLPDDGVFLGRARSPDVPHPLIVTVRDGTVFDITSSAAPTVRDICEMADPAGHVRSAKGKPIGSLDDIAANSFQTS RDPAKPYLLSPVDLQAVKASGVTFVVSLLERVIEEQARGSAEKADAIRADIAGLIGHDLSKLKPGSPEAMEIKAKLIARG AWSQYLEVGIGPDAEIFTKCQPMASVGFGADVGLHPVSTWNNPEPEIAMIAASSGRIVGATIGNDVNLRDVEGRSALLLG KAKDNNASASLGPFIRLFDDTFSIDDVKRAVVRLKVEGEDGFSLEGASSMAEISRSPEELVAAAIGPHHQYPDGLALYLG TMFVPSKDRGEKGKGFTHKVGDIVTISSEKFGALVNRVRLSPDCPHWTYGASHLMRDLAKADLI
Specific function: Unknown
COG id: COG3970
COG function: function code R; Fumarylacetoacetate (FAA) hydrolase family protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40951; Mature: 40820
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNMTFLPDDGVFLGRARSPDVPHPLIVTVRDGTVFDITSSAAPTVRDICEMADPAGHVR CCCCCCCCCCCEEEECCCCCCCCCCEEEEEECCEEEEECCCCCCHHHHHHHHCCCCCHHH SAKGKPIGSLDDIAANSFQTSRDPAKPYLLSPVDLQAVKASGVTFVVSLLERVIEEQARG CCCCCCCCCHHHHHHCCCCCCCCCCCCEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHCC SAEKADAIRADIAGLIGHDLSKLKPGSPEAMEIKAKLIARGAWSQYLEVGIGPDAEIFTK CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH CQPMASVGFGADVGLHPVSTWNNPEPEIAMIAASSGRIVGATIGNDVNLRDVEGRSALLL CCCHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCEEECCCCCEEEE GKAKDNNASASLGPFIRLFDDTFSIDDVKRAVVRLKVEGEDGFSLEGASSMAEISRSPEE EECCCCCCCCCCCCCCEECCCCCCHHHHHEEEEEEEECCCCCCCCCCHHHHHHHHCCHHH LVAAAIGPHHQYPDGLALYLGTMFVPSKDRGEKGKGFTHKVGDIVTISSEKFGALVNRVR HHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEECCCEEEECCHHHHHHHHHHC LSPDCPHWTYGASHLMRDLAKADLI CCCCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure TNMTFLPDDGVFLGRARSPDVPHPLIVTVRDGTVFDITSSAAPTVRDICEMADPAGHVR CCCCCCCCCCEEEECCCCCCCCCCEEEEEECCEEEEECCCCCCHHHHHHHHCCCCCHHH SAKGKPIGSLDDIAANSFQTSRDPAKPYLLSPVDLQAVKASGVTFVVSLLERVIEEQARG CCCCCCCCCHHHHHHCCCCCCCCCCCCEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHCC SAEKADAIRADIAGLIGHDLSKLKPGSPEAMEIKAKLIARGAWSQYLEVGIGPDAEIFTK CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH CQPMASVGFGADVGLHPVSTWNNPEPEIAMIAASSGRIVGATIGNDVNLRDVEGRSALLL CCCHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCEEECCCCCEEEE GKAKDNNASASLGPFIRLFDDTFSIDDVKRAVVRLKVEGEDGFSLEGASSMAEISRSPEE EECCCCCCCCCCCCCCEECCCCCCHHHHHEEEEEEEECCCCCCCCCCHHHHHHHHCCHHH LVAAAIGPHHQYPDGLALYLGTMFVPSKDRGEKGKGFTHKVGDIVTISSEKFGALVNRVR HHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEECCCEEEECCHHHHHHHHHHC LSPDCPHWTYGASHLMRDLAKADLI CCCCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA