| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13476113
Identifier: 13476113
GI number: 13476113
Start: 6073778
End: 6074521
Strand: Reverse
Name: 13476113
Synonym: mll7342
Alternate gene names: NA
Gene position: 6074521-6073778 (Counterclockwise)
Preceding gene: 13476114
Following gene: 13476110
Centisome position: 86.33
GC content: 60.48
Gene sequence:
>744_bases ATGCCGATGCAGAAACGGCTGCGCGTTCAGGTGGGATCGATGATCGTCGCCGATACGACCAAGGCGCTGGTGCTCTACGA ATCCGATCATCTGCCGGTTTACTATTTTCCGATGAGTGACGTGCGCGAGGAGTTCCTGTTGCCGAGCAGGACGACGACAG AGAGTCCGTTCAAGGGCGTCGCCACGCATTATTCGCTGAACACCGGCATCACGCTGGTCGAGGACGCCGCCTGGCGCTAT CTCGATCCGGTCAAGGGATCGCCTGACCTGTCGGGCTACATGTCCTTCTATTGGCCCAAGATGACGCACTGGTACGAGGA AGACGAAGAGATCTTCGTCCACGCCCGCGACCCGTTCCGCCGGGTCGATTGCCTACCCTCCTCGCGGCGGGTGCAGGTCA TCCTCGACGGCGAGCAGGTCGCCGATTCACGCCGTGGCGTGTTCCTGTTCGAGACCGGCCATCCGGTGCGTCACTATCTG CCGATCTCGGACACGCGGCTCGATATGTTCGCGCCCAGCCGCTACATTTCACGCTGCCCCTACAAGGGCATCTCCAACTA CTATCACGTGACGACGCCCCAGAAGCGGCACGAGAATCTCGTCTGGTACTATCCCGAGCCGGTGCATGAGGCCGAGCGCA TCAAGGGACTGGTCTGCTTCCATCACGAACTGGTCGACAAAATCCTGGTCGACGGCGTCGATATCTCGAAGGAAGCCACG GCGGCATCGGACGGCTATTTCTGA
Upstream 100 bases:
>100_bases TACCATTCGCAAGCCTCATTTGCGCGGTCGCGGACCGCATTTCCCCTTGCTCGACACCATCATGCAGTATGAGTTCGAGC CGGGCTATGTCGCCTTCACC
Downstream 100 bases:
>100_bases GCCACGACACCCCAACCCTTTCAAATGGGATGCACTTTAAATAACCTTGCTACGGCGCGCATGGGTCTAGTAGCGCGCCA TGATCTGGATGACAAAAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MPMQKRLRVQVGSMIVADTTKALVLYESDHLPVYYFPMSDVREEFLLPSRTTTESPFKGVATHYSLNTGITLVEDAAWRY LDPVKGSPDLSGYMSFYWPKMTHWYEEDEEIFVHARDPFRRVDCLPSSRRVQVILDGEQVADSRRGVFLFETGHPVRHYL PISDTRLDMFAPSRYISRCPYKGISNYYHVTTPQKRHENLVWYYPEPVHEAERIKGLVCFHHELVDKILVDGVDISKEAT AASDGYF
Sequences:
>Translated_247_residues MPMQKRLRVQVGSMIVADTTKALVLYESDHLPVYYFPMSDVREEFLLPSRTTTESPFKGVATHYSLNTGITLVEDAAWRY LDPVKGSPDLSGYMSFYWPKMTHWYEEDEEIFVHARDPFRRVDCLPSSRRVQVILDGEQVADSRRGVFLFETGHPVRHYL PISDTRLDMFAPSRYISRCPYKGISNYYHVTTPQKRHENLVWYYPEPVHEAERIKGLVCFHHELVDKILVDGVDISKEAT AASDGYF >Mature_246_residues PMQKRLRVQVGSMIVADTTKALVLYESDHLPVYYFPMSDVREEFLLPSRTTTESPFKGVATHYSLNTGITLVEDAAWRYL DPVKGSPDLSGYMSFYWPKMTHWYEEDEEIFVHARDPFRRVDCLPSSRRVQVILDGEQVADSRRGVFLFETGHPVRHYLP ISDTRLDMFAPSRYISRCPYKGISNYYHVTTPQKRHENLVWYYPEPVHEAERIKGLVCFHHELVDKILVDGVDISKEATA ASDGYF
Specific function: Unknown
COG id: COG2343
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28690; Mature: 28559
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMQKRLRVQVGSMIVADTTKALVLYESDHLPVYYFPMSDVREEFLLPSRTTTESPFKGV CCCHHHHHHHCCCEEEECCCEEEEEEECCCCCEEEECHHHHHHHHCCCCCCCCCCCCCCC ATHYSLNTGITLVEDAAWRYLDPVKGSPDLSGYMSFYWPKMTHWYEEDEEIFVHARDPFR EEEEECCCCEEEEECCCHHHCCCCCCCCCCCHHHHHHCCHHHHCCCCCCEEEEEECCCHH RVDCLPSSRRVQVILDGEQVADSRRGVFLFETGHPVRHYLPISDTRLDMFAPSRYISRCP HHHCCCCCCEEEEEECCHHHHCCCCCEEEEECCCCEEEEECCCCCEEECCCCHHHHHHCC YKGISNYYHVTTPQKRHENLVWYYPEPVHEAERIKGLVCFHHELVDKILVDGVDISKEAT CCCCCCEEEECCCHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC AASDGYF CCCCCCC >Mature Secondary Structure PMQKRLRVQVGSMIVADTTKALVLYESDHLPVYYFPMSDVREEFLLPSRTTTESPFKGV CCHHHHHHHCCCEEEECCCEEEEEEECCCCCEEEECHHHHHHHHCCCCCCCCCCCCCCC ATHYSLNTGITLVEDAAWRYLDPVKGSPDLSGYMSFYWPKMTHWYEEDEEIFVHARDPFR EEEEECCCCEEEEECCCHHHCCCCCCCCCCCHHHHHHCCHHHHCCCCCCEEEEEECCCHH RVDCLPSSRRVQVILDGEQVADSRRGVFLFETGHPVRHYLPISDTRLDMFAPSRYISRCP HHHCCCCCCEEEEEECCHHHHCCCCCEEEEECCCCEEEEECCCCCEEECCCCHHHHHHCC YKGISNYYHVTTPQKRHENLVWYYPEPVHEAERIKGLVCFHHELVDKILVDGVDISKEAT CCCCCCEEEECCCHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC AASDGYF CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA