Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13476099

Identifier: 13476099

GI number: 13476099

Start: 6058057

End: 6059097

Strand: Direct

Name: 13476099

Synonym: mlr7324

Alternate gene names: NA

Gene position: 6058057-6059097 (Clockwise)

Preceding gene: 13476098

Following gene: 13476101

Centisome position: 86.1

GC content: 62.54

Gene sequence:

>1041_bases
ATGGGCATCACCTTTCGCAAGGAAACCTTCCGCGACGATTTCACCTTCAGGAACAGCCCCGAGCACATCAGGCGGTTTCC
GTTCCCGTTCCACGAAGATGCCTACATGTATGCGGTCAACATCGAGCCGCATGTCGTCGGGCCGAAGGGCAGCGTGCTGG
AGAACCTGATCGACGTCGACGAGCACTATGTCGCCGAGATGCAGGACCGCGCTTTGGTGCTCGCCGAGGACCCGCTGCGC
TGCCAGTCGCTGCCGCACATGACGCTCGCCGGCTGGGATCTGCTCGAACTGCTCATGGAACAGCAGGCCCTTGGCTATCC
CGAGCATTTCACGCTGACGCGTGACGGCGACCGCTGGCGCTGGATCAACCGGCCGCTTGGCATCGATGACACCTTCACCT
TCGGCGACACCTCGACCCTGCCTTATGGTCCGATGGAATACATCACCCGCCAGAGCCAGGGCGATTTCTGCATCCTCGAC
CAGCGCGACGGCAATCTGTGGATGGATGCCGGCATGGTCACCACCCAGGCCGACTGGTCGCTCGATTTCGACATCGGCAT
GAATTTTTTCGAGTGGCACGCGCCGGTGCCGCTGGCGCATGAGAAGGGCATTTTCACGCGGGCGCTGAAATTCCTCACCA
ACATCCAGCAGGGCAAGCCGGCGCGGCGCCTCAACTGGACGATGACCATCAATCCGCGCCTCGATACCAGCCCGGAAAAT
TACCACAAATGGGGACCGGACCGCGCGACGGTGACCCCGGAGAATGTCGGCGACAAGGTGCATCTGCGCGTCGAGCTGCA
AAGCTTCTGGCGCCTGCCGCGCTCCAACGGCATCGTCTTCCCGATCCGCTGCTACCTGATCAAGATGGACGAGCTGGTGA
CGCAGCCGAAATGGGCGCGCCGCCTGCACCGCGTCATCCGCGATCTGCCCGAGGAACTCGCCACCTACAAGGGCCTCACG
CGCTATCGGCCGACGCTGGTGGAATGGCTGTCGAAGTTGGACGATGGGAGCGCGACGAGCCCGGGGTTTGGGCCTGATTA
A

Upstream 100 bases:

>100_bases
GAGCGGTGAAGCATTTTGCAGCCAAGTGGATACACTTGGCGTCGCAGAAATGCGGCTGAAACAAATAGATAAAGCGGGCA
TCCCGCTCTAGGAGGAAATC

Downstream 100 bases:

>100_bases
CCCGCGCTGTTCTGCGGATAGCAGATGATCGACAGATACCGCATCGGCAGCTTCGTCAACTGCTCCGGCCCATGCGGCGC
ATCGGCGTCGAAGAACAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 346; Mature: 345

Protein sequence:

>346_residues
MGITFRKETFRDDFTFRNSPEHIRRFPFPFHEDAYMYAVNIEPHVVGPKGSVLENLIDVDEHYVAEMQDRALVLAEDPLR
CQSLPHMTLAGWDLLELLMEQQALGYPEHFTLTRDGDRWRWINRPLGIDDTFTFGDTSTLPYGPMEYITRQSQGDFCILD
QRDGNLWMDAGMVTTQADWSLDFDIGMNFFEWHAPVPLAHEKGIFTRALKFLTNIQQGKPARRLNWTMTINPRLDTSPEN
YHKWGPDRATVTPENVGDKVHLRVELQSFWRLPRSNGIVFPIRCYLIKMDELVTQPKWARRLHRVIRDLPEELATYKGLT
RYRPTLVEWLSKLDDGSATSPGFGPD

Sequences:

>Translated_346_residues
MGITFRKETFRDDFTFRNSPEHIRRFPFPFHEDAYMYAVNIEPHVVGPKGSVLENLIDVDEHYVAEMQDRALVLAEDPLR
CQSLPHMTLAGWDLLELLMEQQALGYPEHFTLTRDGDRWRWINRPLGIDDTFTFGDTSTLPYGPMEYITRQSQGDFCILD
QRDGNLWMDAGMVTTQADWSLDFDIGMNFFEWHAPVPLAHEKGIFTRALKFLTNIQQGKPARRLNWTMTINPRLDTSPEN
YHKWGPDRATVTPENVGDKVHLRVELQSFWRLPRSNGIVFPIRCYLIKMDELVTQPKWARRLHRVIRDLPEELATYKGLT
RYRPTLVEWLSKLDDGSATSPGFGPD
>Mature_345_residues
GITFRKETFRDDFTFRNSPEHIRRFPFPFHEDAYMYAVNIEPHVVGPKGSVLENLIDVDEHYVAEMQDRALVLAEDPLRC
QSLPHMTLAGWDLLELLMEQQALGYPEHFTLTRDGDRWRWINRPLGIDDTFTFGDTSTLPYGPMEYITRQSQGDFCILDQ
RDGNLWMDAGMVTTQADWSLDFDIGMNFFEWHAPVPLAHEKGIFTRALKFLTNIQQGKPARRLNWTMTINPRLDTSPENY
HKWGPDRATVTPENVGDKVHLRVELQSFWRLPRSNGIVFPIRCYLIKMDELVTQPKWARRLHRVIRDLPEELATYKGLTR
YRPTLVEWLSKLDDGSATSPGFGPD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40300; Mature: 40169

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGITFRKETFRDDFTFRNSPEHIRRFPFPFHEDAYMYAVNIEPHVVGPKGSVLENLIDVD
CCCCCCHHHHCCCCCCCCCHHHHHHCCCCCCCCCEEEEEECCCEEECCCHHHHHHHHHHH
EHYVAEMQDRALVLAEDPLRCQSLPHMTLAGWDLLELLMEQQALGYPEHFTLTRDGDRWR
HHHHHHHCCCEEEEECCCHHHHCCCCCEECHHHHHHHHHHHHHCCCCCCEEEECCCCCEE
WINRPLGIDDTFTFGDTSTLPYGPMEYITRQSQGDFCILDQRDGNLWMDAGMVTTQADWS
EECCCCCCCCCEECCCCCCCCCCCHHHHHHCCCCCEEEEECCCCCEEEECCEEEECCCCE
LDFDIGMNFFEWHAPVPLAHEKGIFTRALKFLTNIQQGKPARRLNWTMTINPRLDTSPEN
EEHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCH
YHKWGPDRATVTPENVGDKVHLRVELQSFWRLPRSNGIVFPIRCYLIKMDELVTQPKWAR
HHCCCCCCCEECCCCCCCEEEEEEEHHHHHCCCCCCCEEEEEEEEEEEHHHHHCCCHHHH
RLHRVIRDLPEELATYKGLTRYRPTLVEWLSKLDDGSATSPGFGPD
HHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
GITFRKETFRDDFTFRNSPEHIRRFPFPFHEDAYMYAVNIEPHVVGPKGSVLENLIDVD
CCCCCHHHHCCCCCCCCCHHHHHHCCCCCCCCCEEEEEECCCEEECCCHHHHHHHHHHH
EHYVAEMQDRALVLAEDPLRCQSLPHMTLAGWDLLELLMEQQALGYPEHFTLTRDGDRWR
HHHHHHHCCCEEEEECCCHHHHCCCCCEECHHHHHHHHHHHHHCCCCCCEEEECCCCCEE
WINRPLGIDDTFTFGDTSTLPYGPMEYITRQSQGDFCILDQRDGNLWMDAGMVTTQADWS
EECCCCCCCCCEECCCCCCCCCCCHHHHHHCCCCCEEEEECCCCCEEEECCEEEECCCCE
LDFDIGMNFFEWHAPVPLAHEKGIFTRALKFLTNIQQGKPARRLNWTMTINPRLDTSPEN
EEHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCH
YHKWGPDRATVTPENVGDKVHLRVELQSFWRLPRSNGIVFPIRCYLIKMDELVTQPKWAR
HHCCCCCCCEECCCCCCCEEEEEEEHHHHHCCCCCCCEEEEEEEEEEEHHHHHCCCHHHH
RLHRVIRDLPEELATYKGLTRYRPTLVEWLSKLDDGSATSPGFGPD
HHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA