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The map label for this gene is yhfM [C]

Identifier: 13476092

GI number: 13476092

Start: 6052656

End: 6054074

Strand: Reverse

Name: yhfM [C]

Synonym: mll7315

Alternate gene names: 13476092

Gene position: 6054074-6052656 (Counterclockwise)

Preceding gene: 13476093

Following gene: 13476091

Centisome position: 86.04

GC content: 61.95

Gene sequence:

>1419_bases
GTGGGGACTGACATGACGGCTGCGGTTGAAACGGCACAAACGACGACAATCCACGGCGACAGGGTCTCGCTGCTGCGGGT
GCTCGGCCCGGCCCATGTCTGGGCGCTCGGCGTCGGCATCGTGCTGGTCGGCGAATTCACCGGCTGGAATTTCGCCGCCG
ACAAGGGCGGCGCGCTTGCCGCGCTGATCGTCTGCTGGGTGGTCGGATTGCTCTACACCTCGGTCGCGATGATCGATTCC
GAAGTGACATCGACGGTCGCCGCCGCCGGCGGCCAGTATGCGCAGGCAAAGCACATTGTCGGGCCGCTGATGGCATTCAA
TGTCGCGTTGTTCCTGGTGTTTGCCTACACGATGCTTGAAGTGTCCGACGCCATCCTGCTTGGCGACACCATCGTCTCAA
AGGCGGGCGTCGAAGGGCTCACCCACAATTCCTTCATCGCCGCCACCATCGTCGTGCTGGCCTGGCTCAACTATCGCGGC
GTGCTGATGACGCTGAACGTCAACTTCGTCATCACCGCAATCGCCTATGTCTCGATCGTCATCCTGTTCTTCTCGGTCAG
CCCGTGGACGCAGGGCGCCGTGCTGAAGCTCAACGAGCTGGTCACCCCCGAAAACGCCCTGCCCTATGGCTGGATCGGCG
TCATTGCCGCCTTCCAGTTCGGCATCTGGTACTATCTCGGCATCGAGGGCACCACGCAGGCGGCCGAGGAAGTGCGCTCG
CCGGCCCGCTCCCTGCCCTACGGAACCATGGCCGGCATGATCACGCTGCTGATCGCCGCCGCCATGACCTGGTATGTCTG
TGCCTCGCTGATGCCCTGGGAATATCTCGGTATCACCTATTATCCGCTGTGGGACGCCGGCAAGCTGACCGGCAGCCCGC
TGCTCGAGAACCTCTTGTTCATCGCGACGCTGCTGGCGGCATTGGCATCGGCCAATGGCTGCATCAACGACGCGGCGCGC
GCATGGTTCTCGCTCGGCCGCGACCGTTATCTGCCGAGCTGGTTCTCGGCGGTGCATCCGAAATACCGCACGCCTTACCG
CTCGATCCTGTTCCTGCTGCCGATTGCGCTCGCCTTCGCCTTCATCGCCGACCTCAACCAGGCAATCACCTTCTCGATCC
TGTCGGGCGTGCTGCAATACACCTTCATGAGCATCAACATCATGATGTTCCGCAAGAAGTGGCCGCTCGACACGATCCGC
CGCGGCTACACGCACCCGTTCCATCCGCTGCCGGCGATCGTGCTGTTCTGCCTATGCGTGGTGACCTTCTTCGCCATCTT
CCTCGGTTTCGGCTCGCAGCTGATCGCAATGACCATCTTCTATTTCCTGATCTCGCTGTGGTTCCATTTCTACCGCTACA
AATTCGTGCGGCGCGGCGACCAGTTCACCATGCCGTGGCCGAAACCGCAGGGCTATTGA

Upstream 100 bases:

>100_bases
CTACGACTGGTTCAAGGTCGACACGACCTATTCCGAGGACGTTCTGACCTCGTCGCGCGAAGGCGAGCTTGAAGCAGTTT
CCGAAAAACACCGGATCTGA

Downstream 100 bases:

>100_bases
TGGGAGACGGCCCGCCCCGATCCCAGGCGGGCCGGACATGACAAAATGTCCGAAGTGACATCAGCGCTGCTCGCCGGGGC
GATTGTCCTGGCTCTCGTCC

Product: ABC transporter permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 472; Mature: 471

Protein sequence:

>472_residues
MGTDMTAAVETAQTTTIHGDRVSLLRVLGPAHVWALGVGIVLVGEFTGWNFAADKGGALAALIVCWVVGLLYTSVAMIDS
EVTSTVAAAGGQYAQAKHIVGPLMAFNVALFLVFAYTMLEVSDAILLGDTIVSKAGVEGLTHNSFIAATIVVLAWLNYRG
VLMTLNVNFVITAIAYVSIVILFFSVSPWTQGAVLKLNELVTPENALPYGWIGVIAAFQFGIWYYLGIEGTTQAAEEVRS
PARSLPYGTMAGMITLLIAAAMTWYVCASLMPWEYLGITYYPLWDAGKLTGSPLLENLLFIATLLAALASANGCINDAAR
AWFSLGRDRYLPSWFSAVHPKYRTPYRSILFLLPIALAFAFIADLNQAITFSILSGVLQYTFMSINIMMFRKKWPLDTIR
RGYTHPFHPLPAIVLFCLCVVTFFAIFLGFGSQLIAMTIFYFLISLWFHFYRYKFVRRGDQFTMPWPKPQGY

Sequences:

>Translated_472_residues
MGTDMTAAVETAQTTTIHGDRVSLLRVLGPAHVWALGVGIVLVGEFTGWNFAADKGGALAALIVCWVVGLLYTSVAMIDS
EVTSTVAAAGGQYAQAKHIVGPLMAFNVALFLVFAYTMLEVSDAILLGDTIVSKAGVEGLTHNSFIAATIVVLAWLNYRG
VLMTLNVNFVITAIAYVSIVILFFSVSPWTQGAVLKLNELVTPENALPYGWIGVIAAFQFGIWYYLGIEGTTQAAEEVRS
PARSLPYGTMAGMITLLIAAAMTWYVCASLMPWEYLGITYYPLWDAGKLTGSPLLENLLFIATLLAALASANGCINDAAR
AWFSLGRDRYLPSWFSAVHPKYRTPYRSILFLLPIALAFAFIADLNQAITFSILSGVLQYTFMSINIMMFRKKWPLDTIR
RGYTHPFHPLPAIVLFCLCVVTFFAIFLGFGSQLIAMTIFYFLISLWFHFYRYKFVRRGDQFTMPWPKPQGY
>Mature_471_residues
GTDMTAAVETAQTTTIHGDRVSLLRVLGPAHVWALGVGIVLVGEFTGWNFAADKGGALAALIVCWVVGLLYTSVAMIDSE
VTSTVAAAGGQYAQAKHIVGPLMAFNVALFLVFAYTMLEVSDAILLGDTIVSKAGVEGLTHNSFIAATIVVLAWLNYRGV
LMTLNVNFVITAIAYVSIVILFFSVSPWTQGAVLKLNELVTPENALPYGWIGVIAAFQFGIWYYLGIEGTTQAAEEVRSP
ARSLPYGTMAGMITLLIAAAMTWYVCASLMPWEYLGITYYPLWDAGKLTGSPLLENLLFIATLLAALASANGCINDAARA
WFSLGRDRYLPSWFSAVHPKYRTPYRSILFLLPIALAFAFIADLNQAITFSILSGVLQYTFMSINIMMFRKKWPLDTIRR
GYTHPFHPLPAIVLFCLCVVTFFAIFLGFGSQLIAMTIFYFLISLWFHFYRYKFVRRGDQFTMPWPKPQGY

Specific function: Probable amino-acid or metabolite transport protein [H]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Escherichia coli, GI87082250, Length=175, Percent_Identity=25.1428571428571, Blast_Score=63, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17532491, Length=261, Percent_Identity=23.7547892720307, Blast_Score=67, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 52075; Mature: 51944

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTDMTAAVETAQTTTIHGDRVSLLRVLGPAHVWALGVGIVLVGEFTGWNFAADKGGALA
CCCCHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCHHH
ALIVCWVVGLLYTSVAMIDSEVTSTVAAAGGQYAQAKHIVGPLMAFNVALFLVFAYTMLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSDAILLGDTIVSKAGVEGLTHNSFIAATIVVLAWLNYRGVLMTLNVNFVITAIAYVSIV
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHH
ILFFSVSPWTQGAVLKLNELVTPENALPYGWIGVIAAFQFGIWYYLGIEGTTQAAEEVRS
HHHHHCCCCCCCCCEEHHHHCCCCCCCCHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHH
PARSLPYGTMAGMITLLIAAAMTWYVCASLMPWEYLGITYYPLWDAGKLTGSPLLENLLF
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCEEEEECCCCCCCCCCHHHHHHHH
IATLLAALASANGCINDAARAWFSLGRDRYLPSWFSAVHPKYRTPYRSILFLLPIALAFA
HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHH
FIADLNQAITFSILSGVLQYTFMSINIMMFRKKWPLDTIRRGYTHPFHPLPAIVLFCLCV
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHCCCCCCCCHHHHHHHHHHH
VTFFAIFLGFGSQLIAMTIFYFLISLWFHFYRYKFVRRGDQFTMPWPKPQGY
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GTDMTAAVETAQTTTIHGDRVSLLRVLGPAHVWALGVGIVLVGEFTGWNFAADKGGALA
CCCHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCHHH
ALIVCWVVGLLYTSVAMIDSEVTSTVAAAGGQYAQAKHIVGPLMAFNVALFLVFAYTMLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSDAILLGDTIVSKAGVEGLTHNSFIAATIVVLAWLNYRGVLMTLNVNFVITAIAYVSIV
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHH
ILFFSVSPWTQGAVLKLNELVTPENALPYGWIGVIAAFQFGIWYYLGIEGTTQAAEEVRS
HHHHHCCCCCCCCCEEHHHHCCCCCCCCHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHH
PARSLPYGTMAGMITLLIAAAMTWYVCASLMPWEYLGITYYPLWDAGKLTGSPLLENLLF
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCEEEEECCCCCCCCCCHHHHHHHH
IATLLAALASANGCINDAARAWFSLGRDRYLPSWFSAVHPKYRTPYRSILFLLPIALAFA
HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHH
FIADLNQAITFSILSGVLQYTFMSINIMMFRKKWPLDTIRRGYTHPFHPLPAIVLFCLCV
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHCCCCCCCCHHHHHHHHHHH
VTFFAIFLGFGSQLIAMTIFYFLISLWFHFYRYKFVRRGDQFTMPWPKPQGY
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]