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The map label for this gene is yjhU [H]

Identifier: 13476074

GI number: 13476074

Start: 6027743

End: 6028708

Strand: Reverse

Name: yjhU [H]

Synonym: mll7290

Alternate gene names: 13476074

Gene position: 6028708-6027743 (Counterclockwise)

Preceding gene: 13476080

Following gene: 13476073

Centisome position: 85.68

GC content: 63.25

Gene sequence:

>966_bases
ATGGCGATCCGACCGGCAGAACAACTCATTCACAAAGCCGCCTGGCTCTACTATGCGCATGGCCTGCGGCAGGACCAGGT
TGCAAGCCAGCTTAACATTTCGCGTGCTTCGGTGGCCATGTATCTGCGCAAGGCGCGCGAGACCGGCATCGTCAACATCT
CGACCTCGACGCAGCTGTTCACCGACGACGTGATGGCGCGCAGGCTCGAGGACGCCTTGAAGCTCGACGCGGTCTGGATC
GCGCCGGAGAACGGCTATATCCCGGACCCTTCGACTGATATCGCCGTGCTGGCGGCGAGCGTCTTTCTCGAACTGGTCAA
GAAGGGCGACCGCATCGGCGTCGCCTGGGGCCGCACCGTCTATACGATCGCCGACATCATGTCCTATGCCGACCTGCAGG
ATGTCACGGTGGTGCAGCTCTGCGGCAATCTCGGCGCGCCCTACTCCTATCGGCCCGACCAGTGCACCATGGAAATTGCG
CGCCGGCTGAACGCCAAGGGGCTTAATTTCTATGCGCCGCTGGTGCTGTCGACGGAAGATCTCGCGCGTGCGTTGCGCGC
CGAGCCGGTGATCCGCGAACAGCTGGCCGGCATCAGCGATTGCAATCTCGCGCTTTTCTCCGTCGGCACCGTCGATGCAG
ACAGCCATGTCGTCAAATGCGGCGCGCTCAACCCGGACGAAATGGCCGCGCTGCGCGGCATCGGCGCAGCCGGGGTGATT
GCCGGACAGATCATCGACGCCAGGGGCGAGGCGCTCGACTGCAGCTACAACCGCCGGGTCATTTCGGCTGAACTCGGTTC
GCTGCGTGCCATCGAAAAACGCTTGATGGTGGTGCAGGAGGACAGCAAGTTCGAGCCATTGCTCGCGGCGCTCGCGGGCG
GGCTTTGCACGCATCTTGTGGTCGGCGCGCATATGGCGCAACGGCTGCTCGATCATGCCGGAGCGATGCCACAGAAAGCA
TCCTGA

Upstream 100 bases:

>100_bases
ACGACCATCCCGGATACGTTTTATTTAGAGGCGATCGCACTCACGCATGCCAATTTGACTTTTGTCGAGAGCCGTGACTA
ATGTCAGCCGAGGAGACGGC

Downstream 100 bases:

>100_bases
AAAAGCAACCCTTCGCCGGCGCATTGTCATCAAGGCGTCGCGGCATTCCTGTTTCACCACCCAAGACAGCAACTGGACGA
AGCGAACATGAAGAATTTGT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 320

Protein sequence:

>321_residues
MAIRPAEQLIHKAAWLYYAHGLRQDQVASQLNISRASVAMYLRKARETGIVNISTSTQLFTDDVMARRLEDALKLDAVWI
APENGYIPDPSTDIAVLAASVFLELVKKGDRIGVAWGRTVYTIADIMSYADLQDVTVVQLCGNLGAPYSYRPDQCTMEIA
RRLNAKGLNFYAPLVLSTEDLARALRAEPVIREQLAGISDCNLALFSVGTVDADSHVVKCGALNPDEMAALRGIGAAGVI
AGQIIDARGEALDCSYNRRVISAELGSLRAIEKRLMVVQEDSKFEPLLAALAGGLCTHLVVGAHMAQRLLDHAGAMPQKA
S

Sequences:

>Translated_321_residues
MAIRPAEQLIHKAAWLYYAHGLRQDQVASQLNISRASVAMYLRKARETGIVNISTSTQLFTDDVMARRLEDALKLDAVWI
APENGYIPDPSTDIAVLAASVFLELVKKGDRIGVAWGRTVYTIADIMSYADLQDVTVVQLCGNLGAPYSYRPDQCTMEIA
RRLNAKGLNFYAPLVLSTEDLARALRAEPVIREQLAGISDCNLALFSVGTVDADSHVVKCGALNPDEMAALRGIGAAGVI
AGQIIDARGEALDCSYNRRVISAELGSLRAIEKRLMVVQEDSKFEPLLAALAGGLCTHLVVGAHMAQRLLDHAGAMPQKA
S
>Mature_320_residues
AIRPAEQLIHKAAWLYYAHGLRQDQVASQLNISRASVAMYLRKARETGIVNISTSTQLFTDDVMARRLEDALKLDAVWIA
PENGYIPDPSTDIAVLAASVFLELVKKGDRIGVAWGRTVYTIADIMSYADLQDVTVVQLCGNLGAPYSYRPDQCTMEIAR
RLNAKGLNFYAPLVLSTEDLARALRAEPVIREQLAGISDCNLALFSVGTVDADSHVVKCGALNPDEMAALRGIGAAGVIA
GQIIDARGEALDCSYNRRVISAELGSLRAIEKRLMVVQEDSKFEPLLAALAGGLCTHLVVGAHMAQRLLDHAGAMPQKAS

Specific function: Unknown

COG id: COG2390

COG function: function code K; Transcriptional regulator, contains sigma factor-related N-terminal domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sorC transcriptional regulatory family [H]

Homologues:

Organism=Escherichia coli, GI87082414, Length=305, Percent_Identity=31.4754098360656, Blast_Score=169, Evalue=2e-43,
Organism=Escherichia coli, GI1787791, Length=298, Percent_Identity=24.496644295302, Blast_Score=92, Evalue=3e-20,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012287
- InterPro:   IPR007324 [H]

Pfam domain/function: PF04198 Sugar-bind [H]

EC number: NA

Molecular weight: Translated: 34704; Mature: 34573

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIRPAEQLIHKAAWLYYAHGLRQDQVASQLNISRASVAMYLRKARETGIVNISTSTQLF
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHH
TDDVMARRLEDALKLDAVWIAPENGYIPDPSTDIAVLAASVFLELVKKGDRIGVAWGRTV
HHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECHHH
YTIADIMSYADLQDVTVVQLCGNLGAPYSYRPDQCTMEIARRLNAKGLNFYAPLVLSTED
HHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEHHEECHHH
LARALRAEPVIREQLAGISDCNLALFSVGTVDADSHVVKCGALNPDEMAALRGIGAAGVI
HHHHHHCCHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEECCCCHHHHHHHHCCCHHHHH
AGQIIDARGEALDCSYNRRVISAELGSLRAIEKRLMVVQEDSKFEPLLAALAGGLCTHLV
HHHHHHCCCCEECCCCCCEEEHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHH
VGAHMAQRLLDHAGAMPQKAS
HHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
AIRPAEQLIHKAAWLYYAHGLRQDQVASQLNISRASVAMYLRKARETGIVNISTSTQLF
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHH
TDDVMARRLEDALKLDAVWIAPENGYIPDPSTDIAVLAASVFLELVKKGDRIGVAWGRTV
HHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECHHH
YTIADIMSYADLQDVTVVQLCGNLGAPYSYRPDQCTMEIARRLNAKGLNFYAPLVLSTED
HHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEHHEECHHH
LARALRAEPVIREQLAGISDCNLALFSVGTVDADSHVVKCGALNPDEMAALRGIGAAGVI
HHHHHHCCHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEECCCCHHHHHHHHCCCHHHHH
AGQIIDARGEALDCSYNRRVISAELGSLRAIEKRLMVVQEDSKFEPLLAALAGGLCTHLV
HHHHHHCCCCEECCCCCCEEEHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHH
VGAHMAQRLLDHAGAMPQKAS
HHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]