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The map label for this gene is pcaC [H]

Identifier: 13476004

GI number: 13476004

Start: 5951808

End: 5952215

Strand: Direct

Name: pcaC [H]

Synonym: mlr7207

Alternate gene names: 13476004

Gene position: 5951808-5952215 (Clockwise)

Preceding gene: 13476003

Following gene: 13476005

Centisome position: 84.59

GC content: 67.16

Gene sequence:

>408_bases
ATGGATGAAGTCCCCGGCAACGCAGCCAGATATCGCACTGGCCTCGCCGTGCGGCGCGCGGTGCTCGGCGACCGGCATGT
CGATCGGGCCGAGGTCGCCGCCACCGATTTCGACCAGCCGTTTCAAGCGCTGATCACCGAGGCCGCCTGGGGGACCGTGT
GGGCCCGGCCGGGCCTCAGCAAGCGGGAGCGTTCGATCGTCACGCTGGCGCTGCTGGCCGCACTCGGCCATGATGAGGAG
GTCGCCCTGCATGTGCGCGCCACCGCCAACACCGGTGCGACGCGCGACGATATCTGCGAGGCGTTCTTGCATGTCGCCAT
CTATGCCGGCGTGCCGGCCGCCAACCGTGCCTTCAGAATAGCCAAGGACGTGTTTTCGGAAATGGACGGAGCCGACAATG
CCCTCTGA

Upstream 100 bases:

>100_bases
ATCCGCGACGCTGGACATATTCCTTGCGTTGAACAGCCTGAAGCGCTCACCGCGCTGATCCGCGATTTTGTCGCATCGCT
TGCCCCTGGAGCAGAAAACC

Downstream 100 bases:

>100_bases
GTCCGGCTCGAACCGGAGACCCGAGACCGGCGCCTTCTTCCAGCGCGACCGGACATGGCATCCTCCGGCGCTGACGCCGG
GCTATAAGAGTTCGGTGCTG

Product: gamma carboxymuconolactone decarboxylase

Products: NA

Alternate protein names: CMD [H]

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MDEVPGNAARYRTGLAVRRAVLGDRHVDRAEVAATDFDQPFQALITEAAWGTVWARPGLSKRERSIVTLALLAALGHDEE
VALHVRATANTGATRDDICEAFLHVAIYAGVPAANRAFRIAKDVFSEMDGADNAL

Sequences:

>Translated_135_residues
MDEVPGNAARYRTGLAVRRAVLGDRHVDRAEVAATDFDQPFQALITEAAWGTVWARPGLSKRERSIVTLALLAALGHDEE
VALHVRATANTGATRDDICEAFLHVAIYAGVPAANRAFRIAKDVFSEMDGADNAL
>Mature_135_residues
MDEVPGNAARYRTGLAVRRAVLGDRHVDRAEVAATDFDQPFQALITEAAWGTVWARPGLSKRERSIVTLALLAALGHDEE
VALHVRATANTGATRDDICEAFLHVAIYAGVPAANRAFRIAKDVFSEMDGADNAL

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003779
- InterPro:   IPR012788 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: =4.1.1.44 [H]

Molecular weight: Translated: 14557; Mature: 14557

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEVPGNAARYRTGLAVRRAVLGDRHVDRAEVAATDFDQPFQALITEAAWGTVWARPGLS
CCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHCHHCCCCCCC
KRERSIVTLALLAALGHDEEVALHVRATANTGATRDDICEAFLHVAIYAGVPAANRAFRI
HHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHH
AKDVFSEMDGADNAL
HHHHHHHCCCCCCCC
>Mature Secondary Structure
MDEVPGNAARYRTGLAVRRAVLGDRHVDRAEVAATDFDQPFQALITEAAWGTVWARPGLS
CCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHCHHCCCCCCC
KRERSIVTLALLAALGHDEEVALHVRATANTGATRDDICEAFLHVAIYAGVPAANRAFRI
HHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHH
AKDVFSEMDGADNAL
HHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2298704 [H]