| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is fabG [H]
Identifier: 13475996
GI number: 13475996
Start: 5944310
End: 5945101
Strand: Reverse
Name: fabG [H]
Synonym: mll7199
Alternate gene names: 13475996
Gene position: 5945101-5944310 (Counterclockwise)
Preceding gene: 13475997
Following gene: 13475995
Centisome position: 84.49
GC content: 65.78
Gene sequence:
>792_bases ATGACCATGCTTCTTGGCAAGACGATCCTCATCACCGGCGTCGCTTCCGGCATCGGCGCGCGCACGGCGGAACTCGCCGG CCAGCTTGGCGCGGATGTGATCGGCGTGGATGTCCGTGAGCCGGCGGCAGCGGCGGGCAGTTTCGTCAAGGCCGATATTT CGTCGAAGGCCGGCGTCGACGAGTTGGTCGCGCGCCTGCCGCAGCGCATCGATGCGCTGTGCAATGTCGCCGGCCTGTCC GGCAACACCGGCGCGGCAGCGACGCTGGCCGTCAACTTCTTCGGGCTGCGGGCGCTTTCGGAAAGCCTCGCTCCCAGACT TCGCGAAGGCGGTGCCATCGTCAATGTCGCGTCGATCGCCGGCTATGGCTGGCGCGCCAATCTCAACCGTGCGGCCTCGA TGGTCGGCATCGAGGGTTTCCCGGATGTCGCCAAGGTGGTCGCCGACCACGCGGTCAAGAACGAGGAAGGCTATCCCGTC TCGAAGGAACTGCTCCTGCTGTGGACCTTCCGCGCGGCGCATCAGGATCTGTTCAAGAGCCGTGGCATCCGCGTCAATGC GGTGAGTCCCGGACCGGTCGAGACGCCTATCCTGAAACAATTCCGCACAGTGCTTGGCGATGCGCGCGTCGACAGCGACA TTGCCAGGGTCGGACGAGCCGGCACATCGGGCGATATAGCGCCTGTCGTGCTGTTCCTATGCTCGGACGGCGCGCGCTGG GTCAACGGCGCCAACGTGCCGGTCGACGGCGGCCTCGAAGCATCGATCAACGCCGAAGGGCTCGGCTTCTAA
Upstream 100 bases:
>100_bases TGCTGCCGGTCGGCTACCGCGTCAGGCTTCCGGGGAATGCTCGGGCCGACAAAGGCACCGACCCTTCGCCGGAGCGAACC ACTCTTGATCAGGAGAAGGC
Downstream 100 bases:
>100_bases TTGCGAAGCTCCACCGGAGCGAGGGAGACAATCATGGATATCGGACTTCTGATCGACGGCGACAAAAGGGATGCGTCCGG CGCGGCCGCCTACGAGCGTC
Product: 3-alpha-hydroxysteroid dehydrogenase
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MTMLLGKTILITGVASGIGARTAELAGQLGADVIGVDVREPAAAAGSFVKADISSKAGVDELVARLPQRIDALCNVAGLS GNTGAAATLAVNFFGLRALSESLAPRLREGGAIVNVASIAGYGWRANLNRAASMVGIEGFPDVAKVVADHAVKNEEGYPV SKELLLLWTFRAAHQDLFKSRGIRVNAVSPGPVETPILKQFRTVLGDARVDSDIARVGRAGTSGDIAPVVLFLCSDGARW VNGANVPVDGGLEASINAEGLGF
Sequences:
>Translated_263_residues MTMLLGKTILITGVASGIGARTAELAGQLGADVIGVDVREPAAAAGSFVKADISSKAGVDELVARLPQRIDALCNVAGLS GNTGAAATLAVNFFGLRALSESLAPRLREGGAIVNVASIAGYGWRANLNRAASMVGIEGFPDVAKVVADHAVKNEEGYPV SKELLLLWTFRAAHQDLFKSRGIRVNAVSPGPVETPILKQFRTVLGDARVDSDIARVGRAGTSGDIAPVVLFLCSDGARW VNGANVPVDGGLEASINAEGLGF >Mature_262_residues TMLLGKTILITGVASGIGARTAELAGQLGADVIGVDVREPAAAAGSFVKADISSKAGVDELVARLPQRIDALCNVAGLSG NTGAAATLAVNFFGLRALSESLAPRLREGGAIVNVASIAGYGWRANLNRAASMVGIEGFPDVAKVVADHAVKNEEGYPVS KELLLLWTFRAAHQDLFKSRGIRVNAVSPGPVETPILKQFRTVLGDARVDSDIARVGRAGTSGDIAPVVLFLCSDGARWV NGANVPVDGGLEASINAEGLGF
Specific function: 7-Alpha-Dehydroxylation Of Cholic Acid, Yielding Deoxycholic Acid And Lithocholic Acid, Respectively. Highest Affinity With Taurochenodeoxycholic Acid. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Caenorhabditis elegans, GI17555706, Length=279, Percent_Identity=29.3906810035842, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI24639444, Length=279, Percent_Identity=28.673835125448, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI28571526, Length=285, Percent_Identity=29.4736842105263, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI21357041, Length=285, Percent_Identity=29.8245614035088, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI23397609, Length=274, Percent_Identity=30.2919708029197, Blast_Score=68, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 27057; Mature: 26926
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMLLGKTILITGVASGIGARTAELAGQLGADVIGVDVREPAAAAGSFVKADISSKAGVD CCEEECCCEEEEHHHHCCCHHHHHHHHHHCCCEEEECCCCCHHHHCCHHEECCCCCCCHH ELVARLPQRIDALCNVAGLSGNTGAAATLAVNFFGLRALSESLAPRLREGGAIVNVASIA HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHC GYGWRANLNRAASMVGIEGFPDVAKVVADHAVKNEEGYPVSKELLLLWTFRAAHQDLFKS CCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH RGIRVNAVSPGPVETPILKQFRTVLGDARVDSDIARVGRAGTSGDIAPVVLFLCSDGARW CCCEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHHCCCCCC VNGANVPVDGGLEASINAEGLGF CCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TMLLGKTILITGVASGIGARTAELAGQLGADVIGVDVREPAAAAGSFVKADISSKAGVD CEEECCCEEEEHHHHCCCHHHHHHHHHHCCCEEEECCCCCHHHHCCHHEECCCCCCCHH ELVARLPQRIDALCNVAGLSGNTGAAATLAVNFFGLRALSESLAPRLREGGAIVNVASIA HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHC GYGWRANLNRAASMVGIEGFPDVAKVVADHAVKNEEGYPVSKELLLLWTFRAAHQDLFKS CCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH RGIRVNAVSPGPVETPILKQFRTVLGDARVDSDIARVGRAGTSGDIAPVVLFLCSDGARW CCCEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHHCCCCCC VNGANVPVDGGLEASINAEGLGF CCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]