Click here to switch to the map view.

The map label for this gene is yieP [H]

Identifier: 13475993

GI number: 13475993

Start: 5941021

End: 5941812

Strand: Reverse

Name: yieP [H]

Synonym: mll7194

Alternate gene names: 13475993

Gene position: 5941812-5941021 (Counterclockwise)

Preceding gene: 13475995

Following gene: 13475992

Centisome position: 84.45

GC content: 65.66

Gene sequence:

>792_bases
ATGAAGAATAAGAAATCCTTTAGCGCGGCACGGACGTCGCGGGTTGCCGTGGCGGTTTCCAGCGGCTCCACCGCACTGCA
CGCAACCGTCGTCGAGCAGATCGGCCTGCGCATCGTGCAGGGCGACTTCCTGCCCGGCGAAGCGCTGCCCAATGCCGACG
ATTCCAGCGAAATGCTGGGGGTCAGCCGCACGGTGCTGCGCGAGGCGATCAAGGTGCTGGCCGGCAAGGGGCTGGTCGAA
TCGCGGCCGAAGACCGGCACGCGCGTGCGCCCACGCTCCGACTGGAACTTCCTCGATCCGGACGTGCTGTCGTGGCGCTA
CGCCGGCGGTGTCAGCGCCGACGATGTGCGGGCACTGTTCGAACTGCGCCGCGCCATCGAGCCAATGTCGGCAGCACTTG
CCGCCCAGCGCGCCACGCCGGCACAGATTGCCGAGATCCATGCGGCACTGGCCGAAATGGAAGCGGTGAGCGACGATGGC
GACCGCTTCGCCAAGCCCGATCTGGTGTTCCACCAGACGATCCTGCGCATGACCGGCAATGAGCTGATCGGCTCGTTGGC
GGCACTGGTCGAAACCGCACTGGTAATGAGCTTTCGCCTCTCCAACGACAATCCGGAAGGCCAGCGCCATTCCTTGCCGC
TGCATCGCGAGGTGGCCGAGAAGATTGCCGCAGGCGACGCCGCCGGCGCGCAAAAGGCACTTTTGGTGCTCATCGACAAT
GCCGAGGACGACGTGCGCCGCAGCGTCGAGAACCGCAACAAACGCCGCACCGATCGGGGCCAGCAATCGTGA

Upstream 100 bases:

>100_bases
CGTGTGCTGCGGGGCAACCGCAGCGAAATTCTTTGTCATCGGTGCTCCCCCGTCCCTTGACTCCAATCGCCATGGCGATA
AGACATATCATATGAATAGT

Downstream 100 bases:

>100_bases
CCGACACCAAACGCAAACTGCGGTCCGAAGCCTGGTTCGGCGGTGAAGGCAAGAACGCCTTCATGCACCGCAGCTGGATG
AAGAACCAGGGCATCCCGGC

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MKNKKSFSAARTSRVAVAVSSGSTALHATVVEQIGLRIVQGDFLPGEALPNADDSSEMLGVSRTVLREAIKVLAGKGLVE
SRPKTGTRVRPRSDWNFLDPDVLSWRYAGGVSADDVRALFELRRAIEPMSAALAAQRATPAQIAEIHAALAEMEAVSDDG
DRFAKPDLVFHQTILRMTGNELIGSLAALVETALVMSFRLSNDNPEGQRHSLPLHREVAEKIAAGDAAGAQKALLVLIDN
AEDDVRRSVENRNKRRTDRGQQS

Sequences:

>Translated_263_residues
MKNKKSFSAARTSRVAVAVSSGSTALHATVVEQIGLRIVQGDFLPGEALPNADDSSEMLGVSRTVLREAIKVLAGKGLVE
SRPKTGTRVRPRSDWNFLDPDVLSWRYAGGVSADDVRALFELRRAIEPMSAALAAQRATPAQIAEIHAALAEMEAVSDDG
DRFAKPDLVFHQTILRMTGNELIGSLAALVETALVMSFRLSNDNPEGQRHSLPLHREVAEKIAAGDAAGAQKALLVLIDN
AEDDVRRSVENRNKRRTDRGQQS
>Mature_263_residues
MKNKKSFSAARTSRVAVAVSSGSTALHATVVEQIGLRIVQGDFLPGEALPNADDSSEMLGVSRTVLREAIKVLAGKGLVE
SRPKTGTRVRPRSDWNFLDPDVLSWRYAGGVSADDVRALFELRRAIEPMSAALAAQRATPAQIAEIHAALAEMEAVSDDG
DRFAKPDLVFHQTILRMTGNELIGSLAALVETALVMSFRLSNDNPEGQRHSLPLHREVAEKIAAGDAAGAQKALLVLIDN
AEDDVRRSVENRNKRRTDRGQQS

Specific function: Repressor For The Dgorkat Operon. Binds D-Galactonate As An Inducer. [C]

COG id: COG2186

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI48994961, Length=216, Percent_Identity=32.8703703703704, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI48994955, Length=210, Percent_Identity=30.952380952381, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI1786303, Length=212, Percent_Identity=30.6603773584906, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 28457; Mature: 28457

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKKSFSAARTSRVAVAVSSGSTALHATVVEQIGLRIVQGDFLPGEALPNADDSSEMLG
CCCCHHHHHHHHCEEEEEECCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCHHHHH
VSRTVLREAIKVLAGKGLVESRPKTGTRVRPRSDWNFLDPDVLSWRYAGGVSADDVRALF
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCEECCCCCCHHHHHHHH
ELRRAIEPMSAALAAQRATPAQIAEIHAALAEMEAVSDDGDRFAKPDLVFHQTILRMTGN
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHH
ELIGSLAALVETALVMSFRLSNDNPEGQRHSLPLHREVAEKIAAGDAAGAQKALLVLIDN
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEC
AEDDVRRSVENRNKRRTDRGQQS
CHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKNKKSFSAARTSRVAVAVSSGSTALHATVVEQIGLRIVQGDFLPGEALPNADDSSEMLG
CCCCHHHHHHHHCEEEEEECCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCHHHHH
VSRTVLREAIKVLAGKGLVESRPKTGTRVRPRSDWNFLDPDVLSWRYAGGVSADDVRALF
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCEECCCCCCHHHHHHHH
ELRRAIEPMSAALAAQRATPAQIAEIHAALAEMEAVSDDGDRFAKPDLVFHQTILRMTGN
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHH
ELIGSLAALVETALVMSFRLSNDNPEGQRHSLPLHREVAEKIAAGDAAGAQKALLVLIDN
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEC
AEDDVRRSVENRNKRRTDRGQQS
CHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]