| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is yccK [H]
Identifier: 13475981
GI number: 13475981
Start: 5929120
End: 5930175
Strand: Direct
Name: yccK [H]
Synonym: mlr7180
Alternate gene names: 13475981
Gene position: 5929120-5930175 (Clockwise)
Preceding gene: 13475980
Following gene: 13475982
Centisome position: 84.27
GC content: 64.2
Gene sequence:
>1056_bases ATGACTGCCAAGACTTTCGAACTCGGCCCCGGCTACACCATTTCGCGCGTCATTCGCGGCGGCTGGCAGCTTGCCGGCGG CCATGGCGCCATCGACCGCAGCCAAGCGGTGACCGATCTGATCGCCACTTTCGATGCCGGCATCTGGACCTATGATTGCG CCGACATCTACACCGGCGTCGAGGAACTGATCGGCGCCGCGCGCCTGCGCCTGGCCAGCGAACGTGGCCTCGACGTTGCC GCGAAAATGAAAGTGCACACCAAGCTGGTACCCGACCTCGAACGGCTGGCCACGATCAGCCGCGACTATATCAGGGGCAT CGTCGAGCAGTCGCTGCGCAGGCTGAAGACCGAGCGGCTCGATCTCGTGCAGTTCCACTGGTGGGACTATGACCAGCCTC GCTATGTCGAGGCGATGGGCTGGCTCGACGAGCTTCGGCGCGAGGGCAAGGTGCGCAATCTCGGCACCACCAATTTCGAC ACGCCGCGGCTGGCCGAAATCCTCGCCGCCGGCATTCCGCTGGTCAGCCAGCAACTGCAGTATTCAGTGCTCGATCAGCG GCCGGCACACAGCCTCGCCGAGCTTGCCGCGAAAAATGGCGTCAGCTTCCTCTGCTATGGTTCGGTGGCCGGCGGCTTCC TCAGCGACAAATGGCTTGGGGTCGCCGAACCCGCCACGCCGCTCGAAAACCGCTCGCTGGTCAAATACAAGCTGATCATC GATGATTTCGGCGGCTGGGACCTGTTCCAGCAGCTGCTCCAGGCATTGAAGGCCGTCGGCGACCGCCACGGCGTCGACAT CGCCACCATCGCCAGCGCCTGGGTGCTGAAGCAGCCGCGTGTCGCTGCCGTCATCGTCGGCGCCCGCAACCAGGCGCATG CGCTCGCAAATGCTCGCATCATGGACGTCGCGCTCGACGCCGATGACCGGGCGAAGATAGCGGCTGTGATCGCGCAAAGC CAAGGTCCCCTTGGCGACGTCTACACGCTGGAGCGCGACCGTCACGGCCGCCACGGCTCGATCATGCATTACAATTTGAA CGCAGGCCGCACATGA
Upstream 100 bases:
>100_bases CCAATTGCGCCAGCCGGCTCAGGATCGTCAGGACCGGCAAACGGCGGTTCAGCCATGCGCAGACCACGGCCGTGCCGCTG CCGAAGGAGAATGACAAGGG
Downstream 100 bases:
>100_bases ACGCCAGCAACCCGGCGCTGTTTTCGCAGGCCAGCGCCGAGGTTATCGGCCTGCATCGCTTCTTCGTCGACTGGTTCGTC GCCGCGCGAGCCGACACGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MTAKTFELGPGYTISRVIRGGWQLAGGHGAIDRSQAVTDLIATFDAGIWTYDCADIYTGVEELIGAARLRLASERGLDVA AKMKVHTKLVPDLERLATISRDYIRGIVEQSLRRLKTERLDLVQFHWWDYDQPRYVEAMGWLDELRREGKVRNLGTTNFD TPRLAEILAAGIPLVSQQLQYSVLDQRPAHSLAELAAKNGVSFLCYGSVAGGFLSDKWLGVAEPATPLENRSLVKYKLII DDFGGWDLFQQLLQALKAVGDRHGVDIATIASAWVLKQPRVAAVIVGARNQAHALANARIMDVALDADDRAKIAAVIAQS QGPLGDVYTLERDRHGRHGSIMHYNLNAGRT
Sequences:
>Translated_351_residues MTAKTFELGPGYTISRVIRGGWQLAGGHGAIDRSQAVTDLIATFDAGIWTYDCADIYTGVEELIGAARLRLASERGLDVA AKMKVHTKLVPDLERLATISRDYIRGIVEQSLRRLKTERLDLVQFHWWDYDQPRYVEAMGWLDELRREGKVRNLGTTNFD TPRLAEILAAGIPLVSQQLQYSVLDQRPAHSLAELAAKNGVSFLCYGSVAGGFLSDKWLGVAEPATPLENRSLVKYKLII DDFGGWDLFQQLLQALKAVGDRHGVDIATIASAWVLKQPRVAAVIVGARNQAHALANARIMDVALDADDRAKIAAVIAQS QGPLGDVYTLERDRHGRHGSIMHYNLNAGRT >Mature_350_residues TAKTFELGPGYTISRVIRGGWQLAGGHGAIDRSQAVTDLIATFDAGIWTYDCADIYTGVEELIGAARLRLASERGLDVAA KMKVHTKLVPDLERLATISRDYIRGIVEQSLRRLKTERLDLVQFHWWDYDQPRYVEAMGWLDELRREGKVRNLGTTNFDT PRLAEILAAGIPLVSQQLQYSVLDQRPAHSLAELAAKNGVSFLCYGSVAGGFLSDKWLGVAEPATPLENRSLVKYKLIID DFGGWDLFQQLLQALKAVGDRHGVDIATIASAWVLKQPRVAAVIVGARNQAHALANARIMDVALDADDRAKIAAVIAQSQ GPLGDVYTLERDRHGRHGSIMHYNLNAGRT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Escherichia coli, GI1788070, Length=312, Percent_Identity=27.8846153846154, Blast_Score=86, Evalue=5e-18, Organism=Escherichia coli, GI1789199, Length=239, Percent_Identity=29.7071129707113, Blast_Score=82, Evalue=6e-17, Organism=Escherichia coli, GI87081735, Length=286, Percent_Identity=25.5244755244755, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1789375, Length=320, Percent_Identity=24.6875, Blast_Score=62, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 38711; Mature: 38579
Theoretical pI: Translated: 7.75; Mature: 7.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAKTFELGPGYTISRVIRGGWQLAGGHGAIDRSQAVTDLIATFDAGIWTYDCADIYTGV CCCCEEECCCCCHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHH EELIGAARLRLASERGLDVAAKMKVHTKLVPDLERLATISRDYIRGIVEQSLRRLKTERL HHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLVQFHWWDYDQPRYVEAMGWLDELRREGKVRNLGTTNFDTPRLAEILAAGIPLVSQQLQ CEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHH YSVLDQRPAHSLAELAAKNGVSFLCYGSVAGGFLSDKWLGVAEPATPLENRSLVKYKLII HHHHCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEE DDFGGWDLFQQLLQALKAVGDRHGVDIATIASAWVLKQPRVAAVIVGARNQAHALANARI ECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCHHHHHHCCEE MDVALDADDRAKIAAVIAQSQGPLGDVYTLERDRHGRHGSIMHYNLNAGRT EEEEECCCCCHHHHHHEECCCCCCCCEEEECCCCCCCCCCEEEEECCCCCC >Mature Secondary Structure TAKTFELGPGYTISRVIRGGWQLAGGHGAIDRSQAVTDLIATFDAGIWTYDCADIYTGV CCCEEECCCCCHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHH EELIGAARLRLASERGLDVAAKMKVHTKLVPDLERLATISRDYIRGIVEQSLRRLKTERL HHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLVQFHWWDYDQPRYVEAMGWLDELRREGKVRNLGTTNFDTPRLAEILAAGIPLVSQQLQ CEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHH YSVLDQRPAHSLAELAAKNGVSFLCYGSVAGGFLSDKWLGVAEPATPLENRSLVKYKLII HHHHCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEE DDFGGWDLFQQLLQALKAVGDRHGVDIATIASAWVLKQPRVAAVIVGARNQAHALANARI ECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCHHHHHHCCEE MDVALDADDRAKIAAVIAQSQGPLGDVYTLERDRHGRHGSIMHYNLNAGRT EEEEECCCCCHHHHHHEECCCCCCCCEEEECCCCCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9274031; 9384377; 9106203 [H]