| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475980
Identifier: 13475980
GI number: 13475980
Start: 5928770
End: 5929123
Strand: Direct
Name: 13475980
Synonym: mlr7179
Alternate gene names: NA
Gene position: 5928770-5929123 (Clockwise)
Preceding gene: 13475979
Following gene: 13475981
Centisome position: 84.26
GC content: 63.56
Gene sequence:
>354_bases ATGGCCGACGACAGTTTCGAGCTCTTCGACCTTCGCGTCGAGGCGGTCATCCCCGAGGGCAAGCCGATCTATTGCGGCGC CAAGGCGGGTGATTATTTCGAGCTCAAGGGCGAGATGCTGTCGCTGCCGGCAGGGCAGGGCTTTTCGATCTATTCGCTCG CCGCCGTGCTGCCGTTGTTGGCGGCAAAGCAGCGCCCGACCGACGCCAATGACTGGATGACCTCTGACGCCGAGATCGCC TGTCCCGATCCCAATTGCGCCAGCCGGCTCAGGATCGTCAGGACCGGCAAACGGCGGTTCAGCCATGCGCAGACCACGGC CGTGCCGCTGCCGAAGGAGAATGACAAGGGATGA
Upstream 100 bases:
>100_bases CAGGTGCTGCCGCAGGAGCGTGAGCAGTTCGCTGCCGCCTGTGGCGTCATCCGCCGCAACGGCGCCTGCGACATCACCTT CAGCCTGGTGGAGGCCTGAC
Downstream 100 bases:
>100_bases CTGCCAAGACTTTCGAACTCGGCCCCGGCTACACCATTTCGCGCGTCATTCGCGGCGGCTGGCAGCTTGCCGGCGGCCAT GGCGCCATCGACCGCAGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 117; Mature: 116
Protein sequence:
>117_residues MADDSFELFDLRVEAVIPEGKPIYCGAKAGDYFELKGEMLSLPAGQGFSIYSLAAVLPLLAAKQRPTDANDWMTSDAEIA CPDPNCASRLRIVRTGKRRFSHAQTTAVPLPKENDKG
Sequences:
>Translated_117_residues MADDSFELFDLRVEAVIPEGKPIYCGAKAGDYFELKGEMLSLPAGQGFSIYSLAAVLPLLAAKQRPTDANDWMTSDAEIA CPDPNCASRLRIVRTGKRRFSHAQTTAVPLPKENDKG >Mature_116_residues ADDSFELFDLRVEAVIPEGKPIYCGAKAGDYFELKGEMLSLPAGQGFSIYSLAAVLPLLAAKQRPTDANDWMTSDAEIAC PDPNCASRLRIVRTGKRRFSHAQTTAVPLPKENDKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12745; Mature: 12613
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADDSFELFDLRVEAVIPEGKPIYCGAKAGDYFELKGEMLSLPAGQGFSIYSLAAVLPLL CCCCCCEEEEEEEEEECCCCCEEEEECCCCCEEEECCCEEECCCCCCCHHHHHHHHHHHH AAKQRPTDANDWMTSDAEIACPDPNCASRLRIVRTGKRRFSHAQTTAVPLPKENDKG HHCCCCCCCCCCCCCCCEEECCCCCHHHHEEHHHHCHHHHCCCCCEECCCCCCCCCC >Mature Secondary Structure ADDSFELFDLRVEAVIPEGKPIYCGAKAGDYFELKGEMLSLPAGQGFSIYSLAAVLPLL CCCCCEEEEEEEEEECCCCCEEEEECCCCCEEEECCCEEECCCCCCCHHHHHHHHHHHH AAKQRPTDANDWMTSDAEIACPDPNCASRLRIVRTGKRRFSHAQTTAVPLPKENDKG HHCCCCCCCCCCCCCCCEEECCCCCHHHHEEHHHHCHHHHCCCCCEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA