Click here to switch to the map view.

The map label for this gene is ycjP [C]

Identifier: 13475955

GI number: 13475955

Start: 5903843

End: 5904634

Strand: Reverse

Name: ycjP [C]

Synonym: mll7152

Alternate gene names: 13475955

Gene position: 5904634-5903843 (Counterclockwise)

Preceding gene: 13475956

Following gene: 13475954

Centisome position: 83.92

GC content: 63.01

Gene sequence:

>792_bases
ATGCTGACCATCTGCCTGCCCGGCCTCTGGATCGTGCTGTCATCGCTGCGGCCAACCGTCGAGATCATGGCCAAGCCGCC
GGTGTGGATCCCGCAGGAGATCTCGTTCGACGCTTACATCGCAATGTTCTCGGGCATCGGCAAAGGCGGCATCCCGGTCA
TCGAATATTTCCGCAATTCGCTGATCATCTCGGTGACCTCGACGATCATTGCGGTCGCCATCGGCATGGCCGGCGGCTAT
GCCTTCGCGCGCTACCGCTTCCGCGGCAAATCCAGCGTCTTCCTCGGCCTGATGCTGACGCGCACCGTGCCGGGCATCGC
GCTGTCGCTGCCGCTGTTCTTCCTCTACGTGCGGCTCGGCATCATCGACACGCATTTCGGGCTGATCCTGGCCTATGTCG
CGCTTAACGTGCCGTTCACCATCTGGCTGATCGACGGCTTCTTCCGCCAGGTGCCGAAAGACCTCGCCGAGGCCGCACAG
ATCGATGGCTGCACGCGCTGGCAGGCTTTCTGGCAGGTGGAGTTCCCGCTCGCCGGACCGGGCATTGCGTCTGCCGCCAT
CTTTGCCTTCTTGACCTGCTGGAACGAATTCGCGCTGGCTTCGCAACTGACCCGCTCGGTCAGCGCCAAAACGTTGCCGG
TCGGCCTGCTCGACTACACGGCCGAGTTCACCATCGACTGGCGCGGCATGTGCGCGCTGGCCGTGGTGATGATCATTCCC
GCACTCACCCTCACCTATATCGTCCAGAAACACCTTGTCGGCGGCCTGACCTCCGGCGCGGTGAAAGGCTGA

Upstream 100 bases:

>100_bases
GCACGCAGATCGGCGCGGAGTGGTGATGGACGAGAATTCTTCCGCCCGCCTGAAGCGCCGGCTGCTGGGCATCGTCTATC
GCATCGGCCTGTTCCTGGCG

Downstream 100 bases:

>100_bases
TCCCATGGCAACGGTTTCCCTCAAAAAACTGACCAAGCGCTACGGCAATATCGGGATCGTGCATGGCATCGATCTCGATA
TTGCCGACCGCGAATTCATC

Product: sugar ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MLTICLPGLWIVLSSLRPTVEIMAKPPVWIPQEISFDAYIAMFSGIGKGGIPVIEYFRNSLIISVTSTIIAVAIGMAGGY
AFARYRFRGKSSVFLGLMLTRTVPGIALSLPLFFLYVRLGIIDTHFGLILAYVALNVPFTIWLIDGFFRQVPKDLAEAAQ
IDGCTRWQAFWQVEFPLAGPGIASAAIFAFLTCWNEFALASQLTRSVSAKTLPVGLLDYTAEFTIDWRGMCALAVVMIIP
ALTLTYIVQKHLVGGLTSGAVKG

Sequences:

>Translated_263_residues
MLTICLPGLWIVLSSLRPTVEIMAKPPVWIPQEISFDAYIAMFSGIGKGGIPVIEYFRNSLIISVTSTIIAVAIGMAGGY
AFARYRFRGKSSVFLGLMLTRTVPGIALSLPLFFLYVRLGIIDTHFGLILAYVALNVPFTIWLIDGFFRQVPKDLAEAAQ
IDGCTRWQAFWQVEFPLAGPGIASAAIFAFLTCWNEFALASQLTRSVSAKTLPVGLLDYTAEFTIDWRGMCALAVVMIIP
ALTLTYIVQKHLVGGLTSGAVKG
>Mature_263_residues
MLTICLPGLWIVLSSLRPTVEIMAKPPVWIPQEISFDAYIAMFSGIGKGGIPVIEYFRNSLIISVTSTIIAVAIGMAGGY
AFARYRFRGKSSVFLGLMLTRTVPGIALSLPLFFLYVRLGIIDTHFGLILAYVALNVPFTIWLIDGFFRQVPKDLAEAAQ
IDGCTRWQAFWQVEFPLAGPGIASAAIFAFLTCWNEFALASQLTRSVSAKTLPVGLLDYTAEFTIDWRGMCALAVVMIIP
ALTLTYIVQKHLVGGLTSGAVKG

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=257, Percent_Identity=31.9066147859922, Blast_Score=138, Evalue=3e-34,
Organism=Escherichia coli, GI1790464, Length=248, Percent_Identity=35.0806451612903, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI1789860, Length=218, Percent_Identity=23.8532110091743, Blast_Score=79, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 28678; Mature: 28678

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTICLPGLWIVLSSLRPTVEIMAKPPVWIPQEISFDAYIAMFSGIGKGGIPVIEYFRNS
CEEEECHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHH
LIISVTSTIIAVAIGMAGGYAFARYRFRGKSSVFLGLMLTRTVPGIALSLPLFFLYVRLG
EEHHHHHHHHHHHHHHCCCHHHHEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
IIDTHFGLILAYVALNVPFTIWLIDGFFRQVPKDLAEAAQIDGCTRWQAFWQVEFPLAGP
HHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHCCCCHHEEEEEEEECCCCCC
GIASAAIFAFLTCWNEFALASQLTRSVSAKTLPVGLLDYTAEFTIDWRGMCALAVVMIIP
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHCEEEEECHHHHHHHHHHHHHH
ALTLTYIVQKHLVGGLTSGAVKG
HHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MLTICLPGLWIVLSSLRPTVEIMAKPPVWIPQEISFDAYIAMFSGIGKGGIPVIEYFRNS
CEEEECHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHH
LIISVTSTIIAVAIGMAGGYAFARYRFRGKSSVFLGLMLTRTVPGIALSLPLFFLYVRLG
EEHHHHHHHHHHHHHHCCCHHHHEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
IIDTHFGLILAYVALNVPFTIWLIDGFFRQVPKDLAEAAQIDGCTRWQAFWQVEFPLAGP
HHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHCCCCHHEEEEEEEECCCCCC
GIASAAIFAFLTCWNEFALASQLTRSVSAKTLPVGLLDYTAEFTIDWRGMCALAVVMIIP
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHCEEEEECHHHHHHHHHHHHHH
ALTLTYIVQKHLVGGLTSGAVKG
HHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]