| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is fghA [H]
Identifier: 13475915
GI number: 13475915
Start: 5860100
End: 5860972
Strand: Direct
Name: fghA [H]
Synonym: mlr7099
Alternate gene names: 13475915
Gene position: 5860100-5860972 (Clockwise)
Preceding gene: 13475914
Following gene: 13475917
Centisome position: 83.29
GC content: 62.89
Gene sequence:
>873_bases ATGTCGGATCTGATGAAGACCATCTCCTCGGCCAGGTCGCATGGCGGCGTGCAGGGCGTCTACTCTCACGCGTCGGATGC CTGCGCCTGTGACATGGTTTTCGCCGTCTTCGTGCCGCCGCAGGCCCGTGAGAAACCTTGCCCGGTCGTCTGGTACCTCT CCGGCCTCACCTGCACACATGCCAATGTCATGGACAAGGGTGAGTACAGGCGCATGGCCGCGGAGCTTGGCCTGATCGTC GTCTGTCCCGACACCAGCCCGCGCGGCGGCGATATTCCCGACGAGAAGGACAATTGGCAGTTCGGCAGCGGCGCCGGCTT CTACCTCGACGCCACGCAAGCGCCTTACGCCACGAACTACCGCATGTATTCCTATGTCACCGAGGAATTGCCGGCGTTGA TCGCCAAGGTATTTCCGGCCGATATGACGCGCCAGGCGATCTTCGGTCACTCGATGGGCGGGCATGGTGCGCTGACGATC GCGCTCAAAAATCCCGAGCGCTTCAAAAGCTGCTCGGCCTTCGCGCCGATCGTGCAGCCGAGCACCGCTGGCTGGTCACG GCCGGCCCTCGAAAAGTACCTTGGCGCGGACGAGGCATCGTGGCGGAGCTACGATGCCACCTTGCTGATCGAGGATGGCC ACCGTTTCCCCGAGCTTTTCGTCGACCAGGGAACGTCGGACGGCTTTCTCAGGGACGGGCTGAGGCCCTGGCTGCTGGAA GCAGCCTGCACCAGGGCCGGCATTGCGCTGACCCTGCGCATGCAGGATGGCTACGACCACTCGTATTTCTTCATCTCGAC ATTCATGGACGACCATCTGAGATGGCACGCCGAAAGATTGTCCGGCCCGGTTCGTGGCACCGGGTCACGCTGA
Upstream 100 bases:
>100_bases TCGGGAATCATGGTCCAATCCATCAGGGTTGCCGCGGTCCTGGCCCGTGCCGTAGACAGGCGGCCGTGAAGGGCGTTTGC CGATGGCGGAGCAGAAGAAC
Downstream 100 bases:
>100_bases AGCAACGGCATATCCCCCAGCGGGCTAATCCCGCAACAGGTCGAACATCAGCTTGAAGAAGCGGTCGGCATCGACTTCGT GAGCGATGCGCGCATTGTCC
Product: esterase
Products: NA
Alternate protein names: FGH [H]
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MSDLMKTISSARSHGGVQGVYSHASDACACDMVFAVFVPPQAREKPCPVVWYLSGLTCTHANVMDKGEYRRMAAELGLIV VCPDTSPRGGDIPDEKDNWQFGSGAGFYLDATQAPYATNYRMYSYVTEELPALIAKVFPADMTRQAIFGHSMGGHGALTI ALKNPERFKSCSAFAPIVQPSTAGWSRPALEKYLGADEASWRSYDATLLIEDGHRFPELFVDQGTSDGFLRDGLRPWLLE AACTRAGIALTLRMQDGYDHSYFFISTFMDDHLRWHAERLSGPVRGTGSR
Sequences:
>Translated_290_residues MSDLMKTISSARSHGGVQGVYSHASDACACDMVFAVFVPPQAREKPCPVVWYLSGLTCTHANVMDKGEYRRMAAELGLIV VCPDTSPRGGDIPDEKDNWQFGSGAGFYLDATQAPYATNYRMYSYVTEELPALIAKVFPADMTRQAIFGHSMGGHGALTI ALKNPERFKSCSAFAPIVQPSTAGWSRPALEKYLGADEASWRSYDATLLIEDGHRFPELFVDQGTSDGFLRDGLRPWLLE AACTRAGIALTLRMQDGYDHSYFFISTFMDDHLRWHAERLSGPVRGTGSR >Mature_289_residues SDLMKTISSARSHGGVQGVYSHASDACACDMVFAVFVPPQAREKPCPVVWYLSGLTCTHANVMDKGEYRRMAAELGLIVV CPDTSPRGGDIPDEKDNWQFGSGAGFYLDATQAPYATNYRMYSYVTEELPALIAKVFPADMTRQAIFGHSMGGHGALTIA LKNPERFKSCSAFAPIVQPSTAGWSRPALEKYLGADEASWRSYDATLLIEDGHRFPELFVDQGTSDGFLRDGLRPWLLEA ACTRAGIALTLRMQDGYDHSYFFISTFMDDHLRWHAERLSGPVRGTGSR
Specific function: Serine hydrolase involved in the detoxification of formaldehyde. Hydrolyzes S-formylglutathione to glutathione and formate (Probable) [H]
COG id: COG0627
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the esterase D family [H]
Homologues:
Organism=Homo sapiens, GI33413400, Length=280, Percent_Identity=52.8571428571429, Blast_Score=308, Evalue=3e-84, Organism=Escherichia coli, GI1786551, Length=277, Percent_Identity=45.4873646209386, Blast_Score=263, Evalue=9e-72, Organism=Escherichia coli, GI1788477, Length=278, Percent_Identity=46.4028776978417, Blast_Score=244, Evalue=5e-66, Organism=Caenorhabditis elegans, GI17510185, Length=278, Percent_Identity=46.4028776978417, Blast_Score=259, Evalue=8e-70, Organism=Saccharomyces cerevisiae, GI6322393, Length=296, Percent_Identity=39.527027027027, Blast_Score=207, Evalue=1e-54, Organism=Drosophila melanogaster, GI45551932, Length=281, Percent_Identity=47.6868327402135, Blast_Score=266, Evalue=1e-71, Organism=Drosophila melanogaster, GI24648347, Length=281, Percent_Identity=47.6868327402135, Blast_Score=266, Evalue=2e-71,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000801 - InterPro: IPR014186 [H]
Pfam domain/function: PF00756 Esterase [H]
EC number: =3.1.2.12 [H]
Molecular weight: Translated: 31969; Mature: 31838
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLMKTISSARSHGGVQGVYSHASDACACDMVFAVFVPPQAREKPCPVVWYLSGLTCTH CHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHEEEEEECCCCCCCCCCCEEEEECCCEEEC ANVMDKGEYRRMAAELGLIVVCPDTSPRGGDIPDEKDNWQFGSGAGFYLDATQAPYATNY CCHHCCHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCC RMYSYVTEELPALIAKVFPADMTRQAIFGHSMGGHGALTIALKNPERFKSCSAFAPIVQP HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHCCCCCCC STAGWSRPALEKYLGADEASWRSYDATLLIEDGHRFPELFVDQGTSDGFLRDGLRPWLLE CCCCCCCHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHCCCCCCCCHHHCCCHHHHHH AACTRAGIALTLRMQDGYDHSYFFISTFMDDHLRWHAERLSGPVRGTGSR HHHHCCCEEEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SDLMKTISSARSHGGVQGVYSHASDACACDMVFAVFVPPQAREKPCPVVWYLSGLTCTH HHHHHHHHHHHHCCCCHHHHHCCCCHHHHHEEEEEECCCCCCCCCCCEEEEECCCEEEC ANVMDKGEYRRMAAELGLIVVCPDTSPRGGDIPDEKDNWQFGSGAGFYLDATQAPYATNY CCHHCCHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCC RMYSYVTEELPALIAKVFPADMTRQAIFGHSMGGHGALTIALKNPERFKSCSAFAPIVQP HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHCCCCCCC STAGWSRPALEKYLGADEASWRSYDATLLIEDGHRFPELFVDQGTSDGFLRDGLRPWLLE CCCCCCCHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHCCCCCCCCHHHCCCHHHHHH AACTRAGIALTLRMQDGYDHSYFFISTFMDDHLRWHAERLSGPVRGTGSR HHHHCCCEEEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8892832 [H]