| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475894
Identifier: 13475894
GI number: 13475894
Start: 5836901
End: 5838967
Strand: Direct
Name: 13475894
Synonym: mlr7075
Alternate gene names: NA
Gene position: 5836901-5838967 (Clockwise)
Preceding gene: 13475893
Following gene: 13475904
Centisome position: 82.96
GC content: 62.17
Gene sequence:
>2067_bases ATGATCGGGCACAACTCCCCAACGAGGACTGCGCCGCTGATCAGCGTCACGACGCTTGACAAGGTAGCGCTGAGCCGACT TGGGCGAGACGTCGCCGTGAGAAACCGCAAGTCGCGCGCCGTCCTTGCCTATCTTGCACTGAGCCCACATGGTTTTGAAA CCCGCGAGCGCATCTGCGGCTTGCTCTGGAGTGAATCGGACGAGGCACGAGCGAGGGCCTCGCTCAGGCAAACGGTAGTC GATCTCAAGGCCTGTCTGGCTGAAATCGAAGGAGTTTTCTCCGGAGACCGGCTCAACGTGACGCTGAAGCCGTCGCTGGT CACGGTGGATGTGGGCGAGATCAGACACGAACTGAAAGCTGGCCGGATCCCCCCCATCCTTCTGGAGAGGCAGCGTGTCG CCGAAAGCTTTCTCAATGGCCTGGACGACATCGACCCTTCGTTTCGGAACTGGGTCCTCGTCCAGCGGCAATGCCTTCAG GACGAATTTATCTCATGTCTGGAAGCGATGGCCAAGGCCGCGGCAGACTGGCCAGCCCTAAAGCGGGCCGGACAAGCCCT GCTCAATCTCGATCCGACCAACGAGATCGGGTGCCGAGCTGTCATGGAAGCGTCGGCTCGGATGGGCGACCAAGCAACGG CCTTGAGGGCCTATAAGGGGCTTTGGGACCTGCTTGAAACAGAATTCGACAGCGAACCTTCAGCCGCCACGCAGGCACTG GTCAGTGACATCAAGCTCGGTACGATCGGGGCCACGGACAGGGGGGCGGTGACCGCAATCGCCGCCGAGGCGTTCGGGTC CCAGGCGCAACGGCTGCAAGAGCCCGCCGCCGGCGTGCTGCTGTTCGTGCGGGAGTTCGAATTGGTGAGCGGTTCCGTCC GCGCGCGGAACGCCGTGCAAATCTTCCGCAGTGAACTGGTTGCGTCCCTGGTGCGATTCCGCGACTGGGCGGTAATGGAA TGGGAAGGGCATCCCCCCCGCTTCACCGAGAATGCCTATTGCATCGAGGCGACCGGATTTATCGACGGGCCGACATTGCG TCTCAGCATGACGCTTAAGCAGCTTGCATCGGGGCGCTACATCTGGAGCGAGCAGTTTGTCATCGAAAACAGCCAGTGGT ACCAGACCCAGCAGAGGCTCATCCGCCGCATCGCCGTCGCGCTGGGCGTCAGCATGTCGTCCGAACGGCTGGTTCAGATC GCCAGCATCCCGGACCTGTCGCTGGAGCAGTTCGACCGCTGGCTGAGGGCGCAGGAACTGATCTTTCAGTGGCGCCCGGA GTCAGAGGAGCGGGCCGAGGCTCTGTTCAGATCAATCATCGCAGAGTCACCACGCTTCGCTGCCGCCTACGCCGGGTTGG CCGGCATCATCAATTCACGGCATCTGATCTTCCCCGGCATCGGCCGGCGACGCGAACGCCACGCCGAAGCGCTGACGTTT GCCAAGCAGGCGACCCAGATCGATCCAATCGATTCGCGAAGCCAACTGCATCTGGCGTGGTCCTACGCCATGAACGGCAT CCCGCAGCAGGCAGCCATCAGCTTCCTTCTAGCCTGCGAACTCAATGGCAACGACCCCTGGACCTTGGTCTCCGCTTCTC TCGGGCTTGCTTATTGCGATGATCGCGAGAACGCGCGGCGTATCGCCACTCTGGCGTTGCAGACCGGACTCGGCGTTTCA CGCCTGCAATGGAGCTATCAGGCGGGCGTGCGGTTCCTGCTTGGCGACTATGCCGGTTGCGTCGAAGCGGCCGAGCGCGC CGCCGATAGTGTGTCGTACATCGGCGGCTGGAAGGCTGCGGCGCTCGCCTTGCTCGGCAATGAGAAAGCAGCGCATGAAG AGGCCGACCGATTTTTAGCGCAGCTGAAGACGACGTGGTTTGGAAATGAGTCACCGGAGCCGGGCAACGTCGGCACATGG CTCATGGATAGCTTTCCGATCTACAGTCCAGAGGCCGTCGAGGCACTGCGCCGAGGGCTAGCCGGGGCCGGCATTGTCGT CAGCCATATGCCTTTGCCAGAGCCCGTTCTATCGGCAGCCCCGGATGGTGTAGTCCGCGATGCGTGA
Upstream 100 bases:
>100_bases CGTCGCCGTTCCAGTCGCGTCGGCTTCGTTCCCTGATTGACCAGGCCGGCCCGAGCGGCCGCGCCGATCTTATGTAGACG GAGGCAGTTGCGGGACAACG
Downstream 100 bases:
>100_bases GTAGAAGAAACTGTCGCGGTTGAACGGCACCTTTTCGAGAATGGCATCGAAATAGAATTCCGGAATGCCATAGTCGGCCA TGCCACCTTGTTCGGTCTGG
Product: trifolitoxin synthesis, TfuA
Products: NA
Alternate protein names: SARP Family Transcriptional Regulator; Transcriptional Activator Domain-Containing Protein; ATP-Dependent Transcriptional Regulator; Adenylate/Guanylate Cyclase; Transcriptional Regulator; AfsR/DnrI/RedD Family Transcriptional Regulator; Trifolitoxin Synthesis TfuA; Sarp Family Transcriptional Regulator
Number of amino acids: Translated: 688; Mature: 688
Protein sequence:
>688_residues MIGHNSPTRTAPLISVTTLDKVALSRLGRDVAVRNRKSRAVLAYLALSPHGFETRERICGLLWSESDEARARASLRQTVV DLKACLAEIEGVFSGDRLNVTLKPSLVTVDVGEIRHELKAGRIPPILLERQRVAESFLNGLDDIDPSFRNWVLVQRQCLQ DEFISCLEAMAKAAADWPALKRAGQALLNLDPTNEIGCRAVMEASARMGDQATALRAYKGLWDLLETEFDSEPSAATQAL VSDIKLGTIGATDRGAVTAIAAEAFGSQAQRLQEPAAGVLLFVREFELVSGSVRARNAVQIFRSELVASLVRFRDWAVME WEGHPPRFTENAYCIEATGFIDGPTLRLSMTLKQLASGRYIWSEQFVIENSQWYQTQQRLIRRIAVALGVSMSSERLVQI ASIPDLSLEQFDRWLRAQELIFQWRPESEERAEALFRSIIAESPRFAAAYAGLAGIINSRHLIFPGIGRRRERHAEALTF AKQATQIDPIDSRSQLHLAWSYAMNGIPQQAAISFLLACELNGNDPWTLVSASLGLAYCDDRENARRIATLALQTGLGVS RLQWSYQAGVRFLLGDYAGCVEAAERAADSVSYIGGWKAAALALLGNEKAAHEEADRFLAQLKTTWFGNESPEPGNVGTW LMDSFPIYSPEAVEALRRGLAGAGIVVSHMPLPEPVLSAAPDGVVRDA
Sequences:
>Translated_688_residues MIGHNSPTRTAPLISVTTLDKVALSRLGRDVAVRNRKSRAVLAYLALSPHGFETRERICGLLWSESDEARARASLRQTVV DLKACLAEIEGVFSGDRLNVTLKPSLVTVDVGEIRHELKAGRIPPILLERQRVAESFLNGLDDIDPSFRNWVLVQRQCLQ DEFISCLEAMAKAAADWPALKRAGQALLNLDPTNEIGCRAVMEASARMGDQATALRAYKGLWDLLETEFDSEPSAATQAL VSDIKLGTIGATDRGAVTAIAAEAFGSQAQRLQEPAAGVLLFVREFELVSGSVRARNAVQIFRSELVASLVRFRDWAVME WEGHPPRFTENAYCIEATGFIDGPTLRLSMTLKQLASGRYIWSEQFVIENSQWYQTQQRLIRRIAVALGVSMSSERLVQI ASIPDLSLEQFDRWLRAQELIFQWRPESEERAEALFRSIIAESPRFAAAYAGLAGIINSRHLIFPGIGRRRERHAEALTF AKQATQIDPIDSRSQLHLAWSYAMNGIPQQAAISFLLACELNGNDPWTLVSASLGLAYCDDRENARRIATLALQTGLGVS RLQWSYQAGVRFLLGDYAGCVEAAERAADSVSYIGGWKAAALALLGNEKAAHEEADRFLAQLKTTWFGNESPEPGNVGTW LMDSFPIYSPEAVEALRRGLAGAGIVVSHMPLPEPVLSAAPDGVVRDA >Mature_688_residues MIGHNSPTRTAPLISVTTLDKVALSRLGRDVAVRNRKSRAVLAYLALSPHGFETRERICGLLWSESDEARARASLRQTVV DLKACLAEIEGVFSGDRLNVTLKPSLVTVDVGEIRHELKAGRIPPILLERQRVAESFLNGLDDIDPSFRNWVLVQRQCLQ DEFISCLEAMAKAAADWPALKRAGQALLNLDPTNEIGCRAVMEASARMGDQATALRAYKGLWDLLETEFDSEPSAATQAL VSDIKLGTIGATDRGAVTAIAAEAFGSQAQRLQEPAAGVLLFVREFELVSGSVRARNAVQIFRSELVASLVRFRDWAVME WEGHPPRFTENAYCIEATGFIDGPTLRLSMTLKQLASGRYIWSEQFVIENSQWYQTQQRLIRRIAVALGVSMSSERLVQI ASIPDLSLEQFDRWLRAQELIFQWRPESEERAEALFRSIIAESPRFAAAYAGLAGIINSRHLIFPGIGRRRERHAEALTF AKQATQIDPIDSRSQLHLAWSYAMNGIPQQAAISFLLACELNGNDPWTLVSASLGLAYCDDRENARRIATLALQTGLGVS RLQWSYQAGVRFLLGDYAGCVEAAERAADSVSYIGGWKAAALALLGNEKAAHEEADRFLAQLKTTWFGNESPEPGNVGTW LMDSFPIYSPEAVEALRRGLAGAGIVVSHMPLPEPVLSAAPDGVVRDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75697; Mature: 75697
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGHNSPTRTAPLISVTTLDKVALSRLGRDVAVRNRKSRAVLAYLALSPHGFETRERICG CCCCCCCCCCCCEEEEHHHHHHHHHHCCCHHHHCCCCCCEEEEEEEECCCCCHHHHHHHH LLWSESDEARARASLRQTVVDLKACLAEIEGVFSGDRLNVTLKPSLVTVDVGEIRHELKA HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEHHHHHHHHHC GRIPPILLERQRVAESFLNGLDDIDPSFRNWVLVQRQCLQDEFISCLEAMAKAAADWPAL CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH KRAGQALLNLDPTNEIGCRAVMEASARMGDQATALRAYKGLWDLLETEFDSEPSAATQAL HHHCHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH VSDIKLGTIGATDRGAVTAIAAEAFGSQAQRLQEPAAGVLLFVREFELVSGSVRARNAVQ HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHH IFRSELVASLVRFRDWAVMEWEGHPPRFTENAYCIEATGFIDGPTLRLSMTLKQLASGRY HHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEECCCCCCCEEEEHHHHHHHHCCCE IWSEQFVIENSQWYQTQQRLIRRIAVALGVSMSSERLVQIASIPDLSLEQFDRWLRAQEL EECCCEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHEEEECCCCCCHHHHHHHHHHHHH IFQWRPESEERAEALFRSIIAESPRFAAAYAGLAGIINSRHLIFPGIGRRRERHAEALTF HHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHH AKQATQIDPIDSRSQLHLAWSYAMNGIPQQAAISFLLACELNGNDPWTLVSASLGLAYCD HHHHCCCCCCCCCCCEEEEEEHHHCCCCHHHHEEEEEEEEECCCCCEEEEECCCCEEEEC DRENARRIATLALQTGLGVSRLQWSYQAGVRFLLGDYAGCVEAAERAADSVSYIGGWKAA CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH ALALLGNEKAAHEEADRFLAQLKTTWFGNESPEPGNVGTWLMDSFPIYSPEAVEALRRGL HHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHCC AGAGIVVSHMPLPEPVLSAAPDGVVRDA CCCCEEEECCCCCCHHHHCCCCCCCCCC >Mature Secondary Structure MIGHNSPTRTAPLISVTTLDKVALSRLGRDVAVRNRKSRAVLAYLALSPHGFETRERICG CCCCCCCCCCCCEEEEHHHHHHHHHHCCCHHHHCCCCCCEEEEEEEECCCCCHHHHHHHH LLWSESDEARARASLRQTVVDLKACLAEIEGVFSGDRLNVTLKPSLVTVDVGEIRHELKA HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEHHHHHHHHHC GRIPPILLERQRVAESFLNGLDDIDPSFRNWVLVQRQCLQDEFISCLEAMAKAAADWPAL CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH KRAGQALLNLDPTNEIGCRAVMEASARMGDQATALRAYKGLWDLLETEFDSEPSAATQAL HHHCHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH VSDIKLGTIGATDRGAVTAIAAEAFGSQAQRLQEPAAGVLLFVREFELVSGSVRARNAVQ HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHH IFRSELVASLVRFRDWAVMEWEGHPPRFTENAYCIEATGFIDGPTLRLSMTLKQLASGRY HHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEECCCCCCCEEEEHHHHHHHHCCCE IWSEQFVIENSQWYQTQQRLIRRIAVALGVSMSSERLVQIASIPDLSLEQFDRWLRAQEL EECCCEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHEEEECCCCCCHHHHHHHHHHHHH IFQWRPESEERAEALFRSIIAESPRFAAAYAGLAGIINSRHLIFPGIGRRRERHAEALTF HHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHH AKQATQIDPIDSRSQLHLAWSYAMNGIPQQAAISFLLACELNGNDPWTLVSASLGLAYCD HHHHCCCCCCCCCCCEEEEEEHHHCCCCHHHHEEEEEEEEECCCCCEEEEECCCCEEEEC DRENARRIATLALQTGLGVSRLQWSYQAGVRFLLGDYAGCVEAAERAADSVSYIGGWKAA CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH ALALLGNEKAAHEEADRFLAQLKTTWFGNESPEPGNVGTWLMDSFPIYSPEAVEALRRGL HHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHCC AGAGIVVSHMPLPEPVLSAAPDGVVRDA CCCCEEEECCCCCCHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA