Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13475894

Identifier: 13475894

GI number: 13475894

Start: 5836901

End: 5838967

Strand: Direct

Name: 13475894

Synonym: mlr7075

Alternate gene names: NA

Gene position: 5836901-5838967 (Clockwise)

Preceding gene: 13475893

Following gene: 13475904

Centisome position: 82.96

GC content: 62.17

Gene sequence:

>2067_bases
ATGATCGGGCACAACTCCCCAACGAGGACTGCGCCGCTGATCAGCGTCACGACGCTTGACAAGGTAGCGCTGAGCCGACT
TGGGCGAGACGTCGCCGTGAGAAACCGCAAGTCGCGCGCCGTCCTTGCCTATCTTGCACTGAGCCCACATGGTTTTGAAA
CCCGCGAGCGCATCTGCGGCTTGCTCTGGAGTGAATCGGACGAGGCACGAGCGAGGGCCTCGCTCAGGCAAACGGTAGTC
GATCTCAAGGCCTGTCTGGCTGAAATCGAAGGAGTTTTCTCCGGAGACCGGCTCAACGTGACGCTGAAGCCGTCGCTGGT
CACGGTGGATGTGGGCGAGATCAGACACGAACTGAAAGCTGGCCGGATCCCCCCCATCCTTCTGGAGAGGCAGCGTGTCG
CCGAAAGCTTTCTCAATGGCCTGGACGACATCGACCCTTCGTTTCGGAACTGGGTCCTCGTCCAGCGGCAATGCCTTCAG
GACGAATTTATCTCATGTCTGGAAGCGATGGCCAAGGCCGCGGCAGACTGGCCAGCCCTAAAGCGGGCCGGACAAGCCCT
GCTCAATCTCGATCCGACCAACGAGATCGGGTGCCGAGCTGTCATGGAAGCGTCGGCTCGGATGGGCGACCAAGCAACGG
CCTTGAGGGCCTATAAGGGGCTTTGGGACCTGCTTGAAACAGAATTCGACAGCGAACCTTCAGCCGCCACGCAGGCACTG
GTCAGTGACATCAAGCTCGGTACGATCGGGGCCACGGACAGGGGGGCGGTGACCGCAATCGCCGCCGAGGCGTTCGGGTC
CCAGGCGCAACGGCTGCAAGAGCCCGCCGCCGGCGTGCTGCTGTTCGTGCGGGAGTTCGAATTGGTGAGCGGTTCCGTCC
GCGCGCGGAACGCCGTGCAAATCTTCCGCAGTGAACTGGTTGCGTCCCTGGTGCGATTCCGCGACTGGGCGGTAATGGAA
TGGGAAGGGCATCCCCCCCGCTTCACCGAGAATGCCTATTGCATCGAGGCGACCGGATTTATCGACGGGCCGACATTGCG
TCTCAGCATGACGCTTAAGCAGCTTGCATCGGGGCGCTACATCTGGAGCGAGCAGTTTGTCATCGAAAACAGCCAGTGGT
ACCAGACCCAGCAGAGGCTCATCCGCCGCATCGCCGTCGCGCTGGGCGTCAGCATGTCGTCCGAACGGCTGGTTCAGATC
GCCAGCATCCCGGACCTGTCGCTGGAGCAGTTCGACCGCTGGCTGAGGGCGCAGGAACTGATCTTTCAGTGGCGCCCGGA
GTCAGAGGAGCGGGCCGAGGCTCTGTTCAGATCAATCATCGCAGAGTCACCACGCTTCGCTGCCGCCTACGCCGGGTTGG
CCGGCATCATCAATTCACGGCATCTGATCTTCCCCGGCATCGGCCGGCGACGCGAACGCCACGCCGAAGCGCTGACGTTT
GCCAAGCAGGCGACCCAGATCGATCCAATCGATTCGCGAAGCCAACTGCATCTGGCGTGGTCCTACGCCATGAACGGCAT
CCCGCAGCAGGCAGCCATCAGCTTCCTTCTAGCCTGCGAACTCAATGGCAACGACCCCTGGACCTTGGTCTCCGCTTCTC
TCGGGCTTGCTTATTGCGATGATCGCGAGAACGCGCGGCGTATCGCCACTCTGGCGTTGCAGACCGGACTCGGCGTTTCA
CGCCTGCAATGGAGCTATCAGGCGGGCGTGCGGTTCCTGCTTGGCGACTATGCCGGTTGCGTCGAAGCGGCCGAGCGCGC
CGCCGATAGTGTGTCGTACATCGGCGGCTGGAAGGCTGCGGCGCTCGCCTTGCTCGGCAATGAGAAAGCAGCGCATGAAG
AGGCCGACCGATTTTTAGCGCAGCTGAAGACGACGTGGTTTGGAAATGAGTCACCGGAGCCGGGCAACGTCGGCACATGG
CTCATGGATAGCTTTCCGATCTACAGTCCAGAGGCCGTCGAGGCACTGCGCCGAGGGCTAGCCGGGGCCGGCATTGTCGT
CAGCCATATGCCTTTGCCAGAGCCCGTTCTATCGGCAGCCCCGGATGGTGTAGTCCGCGATGCGTGA

Upstream 100 bases:

>100_bases
CGTCGCCGTTCCAGTCGCGTCGGCTTCGTTCCCTGATTGACCAGGCCGGCCCGAGCGGCCGCGCCGATCTTATGTAGACG
GAGGCAGTTGCGGGACAACG

Downstream 100 bases:

>100_bases
GTAGAAGAAACTGTCGCGGTTGAACGGCACCTTTTCGAGAATGGCATCGAAATAGAATTCCGGAATGCCATAGTCGGCCA
TGCCACCTTGTTCGGTCTGG

Product: trifolitoxin synthesis, TfuA

Products: NA

Alternate protein names: SARP Family Transcriptional Regulator; Transcriptional Activator Domain-Containing Protein; ATP-Dependent Transcriptional Regulator; Adenylate/Guanylate Cyclase; Transcriptional Regulator; AfsR/DnrI/RedD Family Transcriptional Regulator; Trifolitoxin Synthesis TfuA; Sarp Family Transcriptional Regulator

Number of amino acids: Translated: 688; Mature: 688

Protein sequence:

>688_residues
MIGHNSPTRTAPLISVTTLDKVALSRLGRDVAVRNRKSRAVLAYLALSPHGFETRERICGLLWSESDEARARASLRQTVV
DLKACLAEIEGVFSGDRLNVTLKPSLVTVDVGEIRHELKAGRIPPILLERQRVAESFLNGLDDIDPSFRNWVLVQRQCLQ
DEFISCLEAMAKAAADWPALKRAGQALLNLDPTNEIGCRAVMEASARMGDQATALRAYKGLWDLLETEFDSEPSAATQAL
VSDIKLGTIGATDRGAVTAIAAEAFGSQAQRLQEPAAGVLLFVREFELVSGSVRARNAVQIFRSELVASLVRFRDWAVME
WEGHPPRFTENAYCIEATGFIDGPTLRLSMTLKQLASGRYIWSEQFVIENSQWYQTQQRLIRRIAVALGVSMSSERLVQI
ASIPDLSLEQFDRWLRAQELIFQWRPESEERAEALFRSIIAESPRFAAAYAGLAGIINSRHLIFPGIGRRRERHAEALTF
AKQATQIDPIDSRSQLHLAWSYAMNGIPQQAAISFLLACELNGNDPWTLVSASLGLAYCDDRENARRIATLALQTGLGVS
RLQWSYQAGVRFLLGDYAGCVEAAERAADSVSYIGGWKAAALALLGNEKAAHEEADRFLAQLKTTWFGNESPEPGNVGTW
LMDSFPIYSPEAVEALRRGLAGAGIVVSHMPLPEPVLSAAPDGVVRDA

Sequences:

>Translated_688_residues
MIGHNSPTRTAPLISVTTLDKVALSRLGRDVAVRNRKSRAVLAYLALSPHGFETRERICGLLWSESDEARARASLRQTVV
DLKACLAEIEGVFSGDRLNVTLKPSLVTVDVGEIRHELKAGRIPPILLERQRVAESFLNGLDDIDPSFRNWVLVQRQCLQ
DEFISCLEAMAKAAADWPALKRAGQALLNLDPTNEIGCRAVMEASARMGDQATALRAYKGLWDLLETEFDSEPSAATQAL
VSDIKLGTIGATDRGAVTAIAAEAFGSQAQRLQEPAAGVLLFVREFELVSGSVRARNAVQIFRSELVASLVRFRDWAVME
WEGHPPRFTENAYCIEATGFIDGPTLRLSMTLKQLASGRYIWSEQFVIENSQWYQTQQRLIRRIAVALGVSMSSERLVQI
ASIPDLSLEQFDRWLRAQELIFQWRPESEERAEALFRSIIAESPRFAAAYAGLAGIINSRHLIFPGIGRRRERHAEALTF
AKQATQIDPIDSRSQLHLAWSYAMNGIPQQAAISFLLACELNGNDPWTLVSASLGLAYCDDRENARRIATLALQTGLGVS
RLQWSYQAGVRFLLGDYAGCVEAAERAADSVSYIGGWKAAALALLGNEKAAHEEADRFLAQLKTTWFGNESPEPGNVGTW
LMDSFPIYSPEAVEALRRGLAGAGIVVSHMPLPEPVLSAAPDGVVRDA
>Mature_688_residues
MIGHNSPTRTAPLISVTTLDKVALSRLGRDVAVRNRKSRAVLAYLALSPHGFETRERICGLLWSESDEARARASLRQTVV
DLKACLAEIEGVFSGDRLNVTLKPSLVTVDVGEIRHELKAGRIPPILLERQRVAESFLNGLDDIDPSFRNWVLVQRQCLQ
DEFISCLEAMAKAAADWPALKRAGQALLNLDPTNEIGCRAVMEASARMGDQATALRAYKGLWDLLETEFDSEPSAATQAL
VSDIKLGTIGATDRGAVTAIAAEAFGSQAQRLQEPAAGVLLFVREFELVSGSVRARNAVQIFRSELVASLVRFRDWAVME
WEGHPPRFTENAYCIEATGFIDGPTLRLSMTLKQLASGRYIWSEQFVIENSQWYQTQQRLIRRIAVALGVSMSSERLVQI
ASIPDLSLEQFDRWLRAQELIFQWRPESEERAEALFRSIIAESPRFAAAYAGLAGIINSRHLIFPGIGRRRERHAEALTF
AKQATQIDPIDSRSQLHLAWSYAMNGIPQQAAISFLLACELNGNDPWTLVSASLGLAYCDDRENARRIATLALQTGLGVS
RLQWSYQAGVRFLLGDYAGCVEAAERAADSVSYIGGWKAAALALLGNEKAAHEEADRFLAQLKTTWFGNESPEPGNVGTW
LMDSFPIYSPEAVEALRRGLAGAGIVVSHMPLPEPVLSAAPDGVVRDA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 75697; Mature: 75697

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGHNSPTRTAPLISVTTLDKVALSRLGRDVAVRNRKSRAVLAYLALSPHGFETRERICG
CCCCCCCCCCCCEEEEHHHHHHHHHHCCCHHHHCCCCCCEEEEEEEECCCCCHHHHHHHH
LLWSESDEARARASLRQTVVDLKACLAEIEGVFSGDRLNVTLKPSLVTVDVGEIRHELKA
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEHHHHHHHHHC
GRIPPILLERQRVAESFLNGLDDIDPSFRNWVLVQRQCLQDEFISCLEAMAKAAADWPAL
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
KRAGQALLNLDPTNEIGCRAVMEASARMGDQATALRAYKGLWDLLETEFDSEPSAATQAL
HHHCHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
VSDIKLGTIGATDRGAVTAIAAEAFGSQAQRLQEPAAGVLLFVREFELVSGSVRARNAVQ
HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHH
IFRSELVASLVRFRDWAVMEWEGHPPRFTENAYCIEATGFIDGPTLRLSMTLKQLASGRY
HHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEECCCCCCCEEEEHHHHHHHHCCCE
IWSEQFVIENSQWYQTQQRLIRRIAVALGVSMSSERLVQIASIPDLSLEQFDRWLRAQEL
EECCCEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHEEEECCCCCCHHHHHHHHHHHHH
IFQWRPESEERAEALFRSIIAESPRFAAAYAGLAGIINSRHLIFPGIGRRRERHAEALTF
HHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHH
AKQATQIDPIDSRSQLHLAWSYAMNGIPQQAAISFLLACELNGNDPWTLVSASLGLAYCD
HHHHCCCCCCCCCCCEEEEEEHHHCCCCHHHHEEEEEEEEECCCCCEEEEECCCCEEEEC
DRENARRIATLALQTGLGVSRLQWSYQAGVRFLLGDYAGCVEAAERAADSVSYIGGWKAA
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
ALALLGNEKAAHEEADRFLAQLKTTWFGNESPEPGNVGTWLMDSFPIYSPEAVEALRRGL
HHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHCC
AGAGIVVSHMPLPEPVLSAAPDGVVRDA
CCCCEEEECCCCCCHHHHCCCCCCCCCC
>Mature Secondary Structure
MIGHNSPTRTAPLISVTTLDKVALSRLGRDVAVRNRKSRAVLAYLALSPHGFETRERICG
CCCCCCCCCCCCEEEEHHHHHHHHHHCCCHHHHCCCCCCEEEEEEEECCCCCHHHHHHHH
LLWSESDEARARASLRQTVVDLKACLAEIEGVFSGDRLNVTLKPSLVTVDVGEIRHELKA
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEHHHHHHHHHC
GRIPPILLERQRVAESFLNGLDDIDPSFRNWVLVQRQCLQDEFISCLEAMAKAAADWPAL
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
KRAGQALLNLDPTNEIGCRAVMEASARMGDQATALRAYKGLWDLLETEFDSEPSAATQAL
HHHCHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
VSDIKLGTIGATDRGAVTAIAAEAFGSQAQRLQEPAAGVLLFVREFELVSGSVRARNAVQ
HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHH
IFRSELVASLVRFRDWAVMEWEGHPPRFTENAYCIEATGFIDGPTLRLSMTLKQLASGRY
HHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEECCCCCCCEEEEHHHHHHHHCCCE
IWSEQFVIENSQWYQTQQRLIRRIAVALGVSMSSERLVQIASIPDLSLEQFDRWLRAQEL
EECCCEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHEEEECCCCCCHHHHHHHHHHHHH
IFQWRPESEERAEALFRSIIAESPRFAAAYAGLAGIINSRHLIFPGIGRRRERHAEALTF
HHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHH
AKQATQIDPIDSRSQLHLAWSYAMNGIPQQAAISFLLACELNGNDPWTLVSASLGLAYCD
HHHHCCCCCCCCCCCEEEEEEHHHCCCCHHHHEEEEEEEEECCCCCEEEEECCCCEEEEC
DRENARRIATLALQTGLGVSRLQWSYQAGVRFLLGDYAGCVEAAERAADSVSYIGGWKAA
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
ALALLGNEKAAHEEADRFLAQLKTTWFGNESPEPGNVGTWLMDSFPIYSPEAVEALRRGL
HHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHCC
AGAGIVVSHMPLPEPVLSAAPDGVVRDA
CCCCEEEECCCCCCHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA