| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475893
Identifier: 13475893
GI number: 13475893
Start: 5835645
End: 5836877
Strand: Direct
Name: 13475893
Synonym: mlr7074
Alternate gene names: NA
Gene position: 5835645-5836877 (Clockwise)
Preceding gene: 13475890
Following gene: 13475894
Centisome position: 82.94
GC content: 61.8
Gene sequence:
>1233_bases ATGGCCCGCGGGTTGCTCGGCGCGCTCGGCTACCTTGACACCAGCGACACAGATCCCGGCTTGATGGCGACAAATAACCG CCAAGGACTACTCTCAGCAGCGGCAAATTTTGGCAATCTGTTCCGCTTGCACGCCCGCCACGCACCGGGGCTGTACTTCT TTGGCGCGCAGGTAAACCGCAACTGGGGAGATTCGGTTTCAGCCATTTCTGCCAGCTTCAGTGGCGTCGGCCTCACACCG GGGCGCGCATTCGAGGCCTGCATCGGCGAGGGCATCGAATATCATAGCGAATGGCAACAGCCGCACGGGACGATGAACCG CACGACAGTAGATGGTGTAGGTCATTGGCAGGACGTTCGCCTGGCTGAACACCTGGACGATTTCCGGGTGCAATCCGGTT TCGGTGAAAGTGACCGGTGGGTGCCCGTGCGCCGGCTGGACGACGGTAGACAGGGCTATTTGCCCGAGACGCTTTTCATT CGCAGCGCAAACCGAAGCGCCTGGGTAACCAGTTGCGGATGCGCCGCAGGGATAACCCACGAGGCTGCCCTGACCTCGGC GCTGCTGGAAGCAATCGAGCGCGATGCGGCTGCCGGCTGGTGGCGCAGCAGGCGCGGCGGCCGGTTGATCGGACTGGAAG CGCTTGCTGGCGCGGGTGTGCTCGATCTGCTTGCGCGGATAAGGCAGGAGAAGCTCGGCAGGTGCACCCAGTTTCTCGAC ATATCGGGTGAGTTTCCCGCGCCTGTAATCGCGGCGCTATCCTTCGACGCGGATGGTCGCGGCCTGGCAGTCGGGCTGGC TTGCAGGCTGGACGCCGGCAACGCCCTGAGGGCGGCGCTGCTGGAAATGTGCCAGATGGAATTGGCTCTCGATCTGGCGG CAATGAAACGCGCAGAACAGGGAGTTGAGAGGCTCGACGAGGTCGACCGCCTGCAGGCGGAGCGCGCCGAGACCCCTGGC GCAATCGACACGGACCTCGTCTCACACCTGTCCAGTGGCGTGCTGATGCACAAAAATGATGAAAAGGACTTGAATTTCGT ATCCTTGGTTGGCGAAATGCTCAAAAAGCAATACCGCATATACGCAGCAGATCTGACCACGCCGATGTTTGACATTCCCG TCGCCAAAGTCTTCGTCCCAGGGCTGCAGCCATTTCCGTCGCCGTTCCAGTCGCGTCGGCTTCGTTCCCTGATTGACCAG GCCGGCCCGAGCGGCCGCGCCGATCTTATGTAG
Upstream 100 bases:
>100_bases CTCCAACAGCGAGGATTGTGGATTGACCGCCGCAAACGCGTTCGAACTGGCAGCGCGATTTTGTTCACAGCCGCAAGATT TAGCGCCTGAACAGGCTGCA
Downstream 100 bases:
>100_bases ACGGAGGCAGTTGCGGGACAACGATGATCGGGCACAACTCCCCAACGAGGACTGCGCCGCTGATCAGCGTCACGACGCTT GACAAGGTAGCGCTGAGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 410; Mature: 409
Protein sequence:
>410_residues MARGLLGALGYLDTSDTDPGLMATNNRQGLLSAAANFGNLFRLHARHAPGLYFFGAQVNRNWGDSVSAISASFSGVGLTP GRAFEACIGEGIEYHSEWQQPHGTMNRTTVDGVGHWQDVRLAEHLDDFRVQSGFGESDRWVPVRRLDDGRQGYLPETLFI RSANRSAWVTSCGCAAGITHEAALTSALLEAIERDAAAGWWRSRRGGRLIGLEALAGAGVLDLLARIRQEKLGRCTQFLD ISGEFPAPVIAALSFDADGRGLAVGLACRLDAGNALRAALLEMCQMELALDLAAMKRAEQGVERLDEVDRLQAERAETPG AIDTDLVSHLSSGVLMHKNDEKDLNFVSLVGEMLKKQYRIYAADLTTPMFDIPVAKVFVPGLQPFPSPFQSRRLRSLIDQ AGPSGRADLM
Sequences:
>Translated_410_residues MARGLLGALGYLDTSDTDPGLMATNNRQGLLSAAANFGNLFRLHARHAPGLYFFGAQVNRNWGDSVSAISASFSGVGLTP GRAFEACIGEGIEYHSEWQQPHGTMNRTTVDGVGHWQDVRLAEHLDDFRVQSGFGESDRWVPVRRLDDGRQGYLPETLFI RSANRSAWVTSCGCAAGITHEAALTSALLEAIERDAAAGWWRSRRGGRLIGLEALAGAGVLDLLARIRQEKLGRCTQFLD ISGEFPAPVIAALSFDADGRGLAVGLACRLDAGNALRAALLEMCQMELALDLAAMKRAEQGVERLDEVDRLQAERAETPG AIDTDLVSHLSSGVLMHKNDEKDLNFVSLVGEMLKKQYRIYAADLTTPMFDIPVAKVFVPGLQPFPSPFQSRRLRSLIDQ AGPSGRADLM >Mature_409_residues ARGLLGALGYLDTSDTDPGLMATNNRQGLLSAAANFGNLFRLHARHAPGLYFFGAQVNRNWGDSVSAISASFSGVGLTPG RAFEACIGEGIEYHSEWQQPHGTMNRTTVDGVGHWQDVRLAEHLDDFRVQSGFGESDRWVPVRRLDDGRQGYLPETLFIR SANRSAWVTSCGCAAGITHEAALTSALLEAIERDAAAGWWRSRRGGRLIGLEALAGAGVLDLLARIRQEKLGRCTQFLDI SGEFPAPVIAALSFDADGRGLAVGLACRLDAGNALRAALLEMCQMELALDLAAMKRAEQGVERLDEVDRLQAERAETPGA IDTDLVSHLSSGVLMHKNDEKDLNFVSLVGEMLKKQYRIYAADLTTPMFDIPVAKVFVPGLQPFPSPFQSRRLRSLIDQA GPSGRADLM
Specific function: Unknown
COG id: COG1944
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44493; Mature: 44362
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARGLLGALGYLDTSDTDPGLMATNNRQGLLSAAANFGNLFRLHARHAPGLYFFGAQVNR CCCCHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHHEEECCCCCCCEEEEECEECC NWGDSVSAISASFSGVGLTPGRAFEACIGEGIEYHSEWQQPHGTMNRTTVDGVGHWQDVR CCCCCHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHCCCCCCCCCCEECCCCCCHHHH LAEHLDDFRVQSGFGESDRWVPVRRLDDGRQGYLPETLFIRSANRSAWVTSCGCAAGITH HHHHHHHHHHHCCCCCCCCEEEHHCCCCCCCCCCCCEEEEECCCCCCEEECCCHHHCCCH EAALTSALLEAIERDAAAGWWRSRRGGRLIGLEALAGAGVLDLLARIRQEKLGRCTQFLD HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHC ISGEFPAPVIAALSFDADGRGLAVGLACRLDAGNALRAALLEMCQMELALDLAAMKRAEQ CCCCCCCCEEEEEECCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GVERLDEVDRLQAERAETPGAIDTDLVSHLSSGVLMHKNDEKDLNFVSLVGEMLKKQYRI HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHE YAADLTTPMFDIPVAKVFVPGLQPFPSPFQSRRLRSLIDQAGPSGRADLM EECCCCCCHHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure ARGLLGALGYLDTSDTDPGLMATNNRQGLLSAAANFGNLFRLHARHAPGLYFFGAQVNR CCCHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHHEEECCCCCCCEEEEECEECC NWGDSVSAISASFSGVGLTPGRAFEACIGEGIEYHSEWQQPHGTMNRTTVDGVGHWQDVR CCCCCHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHCCCCCCCCCCEECCCCCCHHHH LAEHLDDFRVQSGFGESDRWVPVRRLDDGRQGYLPETLFIRSANRSAWVTSCGCAAGITH HHHHHHHHHHHCCCCCCCCEEEHHCCCCCCCCCCCCEEEEECCCCCCEEECCCHHHCCCH EAALTSALLEAIERDAAAGWWRSRRGGRLIGLEALAGAGVLDLLARIRQEKLGRCTQFLD HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHC ISGEFPAPVIAALSFDADGRGLAVGLACRLDAGNALRAALLEMCQMELALDLAAMKRAEQ CCCCCCCCEEEEEECCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GVERLDEVDRLQAERAETPGAIDTDLVSHLSSGVLMHKNDEKDLNFVSLVGEMLKKQYRI HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHE YAADLTTPMFDIPVAKVFVPGLQPFPSPFQSRRLRSLIDQAGPSGRADLM EECCCCCCHHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA