| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is rutB [H]
Identifier: 13475887
GI number: 13475887
Start: 5828675
End: 5829343
Strand: Direct
Name: rutB [H]
Synonym: mlr7067
Alternate gene names: 13475887
Gene position: 5828675-5829343 (Clockwise)
Preceding gene: 13475886
Following gene: 13475888
Centisome position: 82.84
GC content: 65.47
Gene sequence:
>669_bases ATGGCGGAAATCGCAGCGCAGCCATTTCCGTTCGCGTTCAAGCCGCGGACCATGGCGCTGGTCGTCATCGACATGCAGCG CGACTTCGCCGAGCCGGGCGGTTTCGGCGCCAGCCTCGGCAATGATGTCAGCCGTGTCGCGGCGATCGTGCCGACGGTGA AGAGATTGATCGAGGGCTTTCGCGCTGCCGGCCTGCCGGTGATCCATACGATGGAGTGCCACAAACCCGATCTCTCCGAC CTGCCGCCGGCCAAGCGCAATCGCGGCAATCCGTCGATCCGAATCGGCGACGCCGGGCCGATGGGCCGCGTGCTGATCGC CGGCGAACCGGGCACGGCGATCCTCGATGAACTCGTGCCGCTGCCCGGCGAGATCGTCATCGAGAAGCCCGGCAAGGGCG CCTTCTATGCCACCTCTTTCGGCGACGAGCTGAAAAGGCTTGGCGCCGAGCAGCTGGTCTTTGCCGGCGTCACCACCGAG GTCTGCGTGCAGACCACGATGCGCGAGGCCAACGATCGCGGCTATGAGTGCCTGCTCGCCGAGGACGCAACGGAAAGCTA CTTTCCCGAGTTCAAGACGGCGGCGATCGCCATGATCAGGGCGCAGGGCGCCATCGTCGGCTGGACGGCGACGACCGACC AGGTGCTTGAGGGAATTGCCAATGCCTAA
Upstream 100 bases:
>100_bases ATCGCATCTTCGTCATGTCTGACGGCGCGCTGGTCTACGAAACGCCGATCGCGCAGGCCAGCGTCCAGACTATCGGCGAG CACATGGCGGGACATCACTG
Downstream 100 bases:
>100_bases TCTTGCCTTTGCCGGCCTGCTCGACGGCGGCTGGCGCGATCTGGCGTTCGAGCATTTCCGCGACGGCATCGGCGTGCACT GGTTGCTGAAGGGCGGGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Ureidoacrylate amidohydrolase [H]
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MAEIAAQPFPFAFKPRTMALVVIDMQRDFAEPGGFGASLGNDVSRVAAIVPTVKRLIEGFRAAGLPVIHTMECHKPDLSD LPPAKRNRGNPSIRIGDAGPMGRVLIAGEPGTAILDELVPLPGEIVIEKPGKGAFYATSFGDELKRLGAEQLVFAGVTTE VCVQTTMREANDRGYECLLAEDATESYFPEFKTAAIAMIRAQGAIVGWTATTDQVLEGIANA
Sequences:
>Translated_222_residues MAEIAAQPFPFAFKPRTMALVVIDMQRDFAEPGGFGASLGNDVSRVAAIVPTVKRLIEGFRAAGLPVIHTMECHKPDLSD LPPAKRNRGNPSIRIGDAGPMGRVLIAGEPGTAILDELVPLPGEIVIEKPGKGAFYATSFGDELKRLGAEQLVFAGVTTE VCVQTTMREANDRGYECLLAEDATESYFPEFKTAAIAMIRAQGAIVGWTATTDQVLEGIANA >Mature_221_residues AEIAAQPFPFAFKPRTMALVVIDMQRDFAEPGGFGASLGNDVSRVAAIVPTVKRLIEGFRAAGLPVIHTMECHKPDLSDL PPAKRNRGNPSIRIGDAGPMGRVLIAGEPGTAILDELVPLPGEIVIEKPGKGAFYATSFGDELKRLGAEQLVFAGVTTEV CVQTTMREANDRGYECLLAEDATESYFPEFKTAAIAMIRAQGAIVGWTATTDQVLEGIANA
Specific function: In vivo, quickly hydrolyzes the ureidoacrylate peracid to avoid toxicity, but can also hydrolyzes ureidoacrylate that is formed spontaneously from ureidoacrylate peracid. One of the products of hydrolysis, carbamate, hydrolyzes spontaneously, thereby rele
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the isochorismatase family. RutB subfamily [H]
Homologues:
Organism=Escherichia coli, GI87081820, Length=232, Percent_Identity=29.3103448275862, Blast_Score=107, Evalue=9e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019916 - InterPro: IPR000868 [H]
Pfam domain/function: PF00857 Isochorismatase [H]
EC number: NA
Molecular weight: Translated: 23644; Mature: 23513
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEIAAQPFPFAFKPRTMALVVIDMQRDFAEPGGFGASLGNDVSRVAAIVPTVKRLIEGF CCCCCCCCCCCEECCCEEEEEEEECCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH RAAGLPVIHTMECHKPDLSDLPPAKRNRGNPSIRIGDAGPMGRVLIAGEPGTAILDELVP HHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEECCCCHHHHHHHCC LPGEIVIEKPGKGAFYATSFGDELKRLGAEQLVFAGVTTEVCVQTTMREANDRGYECLLA CCCEEEEECCCCCCEEECCHHHHHHHCCHHHEEEECCHHHHHHHHHHHHCCCCCEEEEEE EDATESYFPEFKTAAIAMIRAQGAIVGWTATTDQVLEGIANA CCCCHHHCCHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHCC >Mature Secondary Structure AEIAAQPFPFAFKPRTMALVVIDMQRDFAEPGGFGASLGNDVSRVAAIVPTVKRLIEGF CCCCCCCCCCEECCCEEEEEEEECCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH RAAGLPVIHTMECHKPDLSDLPPAKRNRGNPSIRIGDAGPMGRVLIAGEPGTAILDELVP HHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEECCCCHHHHHHHCC LPGEIVIEKPGKGAFYATSFGDELKRLGAEQLVFAGVTTEVCVQTTMREANDRGYECLLA CCCEEEEECCCCCCEEECCHHHHHHHCCHHHEEEECCHHHHHHHHHHHHCCCCCEEEEEE EDATESYFPEFKTAAIAMIRAQGAIVGWTATTDQVLEGIANA CCCCHHHCCHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA