Click here to switch to the map view.

The map label for this gene is rutB [H]

Identifier: 13475885

GI number: 13475885

Start: 5826440

End: 5827141

Strand: Direct

Name: rutB [H]

Synonym: mlr7064

Alternate gene names: 13475885

Gene position: 5826440-5827141 (Clockwise)

Preceding gene: 13475884

Following gene: 13475886

Centisome position: 82.81

GC content: 64.25

Gene sequence:

>702_bases
ATGAACGCCAGAGCCGAAATCACCCAGCGCTATATCGACGCCGACCCGTATCCATGGCCCTACAATGGCGAGCTTCGCCC
CGACAACACGGCGCTGATCATCATCGACATGCAGACCGATTTCTGCGGACCGGGCGGCTATGTCGACCATATGGGCTACG
ACCTGTCGCTGGTGCGCGCGCCGATCGAGCCAATCAAGTCGGTGCTCTCGGCCATGCGCGCGAAAGGCTACACCGTCATC
CACACCCGCGAGGGCCACCGGCCCGACCTTGCCGACCTGCCCGCCAACAAGCGCTGGCGCTCGCGCCGCATCAATGCCGG
CATTGGCGACCCAGGCCCCTGCGGGCGCATCCTGGTGCGCGGCGAGCCGGGCTGGGACATTATCCCCGATCTCTACCCGA
TCGAGGGTGAGCCGATCATCGACAAGCCCGGCAAGGGCTCGTTCTGCGCCACCGATCTGGAGCTGATCCTCAACCAGCGC
GGCATCGAGAACATCGTGCTCACCGGCATCACCACGGATGTGTGCGTCCACACCACCATGCGCGAGGCCAACGACCGCGG
CTATGAATGCATGATGCTGGAGGATTGCTGCGGGGCGACCGACTTCGGCAACCATCTCGCCGCGATCAAGATGATCAAGA
TGCAGGGCGGCGTCTTCGGCGCAGTGTCGAATTCGAAGGCGCTCGTCGCGCAACTGCCGTGA

Upstream 100 bases:

>100_bases
TTCTCACCCTCATCATCATGATCGCCACCTCGTCGCCGACCCGTTCGCTTGCCGGTGCGCCGGGCGAATTGTCGATCACC
AAATAACTGGAGTTTTTGCC

Downstream 100 bases:

>100_bases
GGAGGCCGCGATGAGTGACAGGAAAGCGGTCGGCGTCGAAACCATCGGCATGACGATGCGCTTCGGCGGCTTCACGGCGC
TGGACGCCGTGTCGGTGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: Ureidoacrylate amidohydrolase [H]

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MNARAEITQRYIDADPYPWPYNGELRPDNTALIIIDMQTDFCGPGGYVDHMGYDLSLVRAPIEPIKSVLSAMRAKGYTVI
HTREGHRPDLADLPANKRWRSRRINAGIGDPGPCGRILVRGEPGWDIIPDLYPIEGEPIIDKPGKGSFCATDLELILNQR
GIENIVLTGITTDVCVHTTMREANDRGYECMMLEDCCGATDFGNHLAAIKMIKMQGGVFGAVSNSKALVAQLP

Sequences:

>Translated_233_residues
MNARAEITQRYIDADPYPWPYNGELRPDNTALIIIDMQTDFCGPGGYVDHMGYDLSLVRAPIEPIKSVLSAMRAKGYTVI
HTREGHRPDLADLPANKRWRSRRINAGIGDPGPCGRILVRGEPGWDIIPDLYPIEGEPIIDKPGKGSFCATDLELILNQR
GIENIVLTGITTDVCVHTTMREANDRGYECMMLEDCCGATDFGNHLAAIKMIKMQGGVFGAVSNSKALVAQLP
>Mature_233_residues
MNARAEITQRYIDADPYPWPYNGELRPDNTALIIIDMQTDFCGPGGYVDHMGYDLSLVRAPIEPIKSVLSAMRAKGYTVI
HTREGHRPDLADLPANKRWRSRRINAGIGDPGPCGRILVRGEPGWDIIPDLYPIEGEPIIDKPGKGSFCATDLELILNQR
GIENIVLTGITTDVCVHTTMREANDRGYECMMLEDCCGATDFGNHLAAIKMIKMQGGVFGAVSNSKALVAQLP

Specific function: In vivo, quickly hydrolyzes the ureidoacrylate peracid to avoid toxicity, but can also hydrolyzes ureidoacrylate that is formed spontaneously from ureidoacrylate peracid. One of the products of hydrolysis, carbamate, hydrolyzes spontaneously, thereby rele

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isochorismatase family. RutB subfamily [H]

Homologues:

Organism=Escherichia coli, GI87081820, Length=174, Percent_Identity=32.7586206896552, Blast_Score=104, Evalue=6e-24,
Organism=Escherichia coli, GI87081992, Length=192, Percent_Identity=29.1666666666667, Blast_Score=67, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019916
- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 25613; Mature: 25613

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNARAEITQRYIDADPYPWPYNGELRPDNTALIIIDMQTDFCGPGGYVDHMGYDLSLVRA
CCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHCCCCCEEECC
PIEPIKSVLSAMRAKGYTVIHTREGHRPDLADLPANKRWRSRRINAGIGDPGPCGRILVR
CHHHHHHHHHHHHHCCEEEEEECCCCCCCHHCCCCCCCHHHHCCCCCCCCCCCCCEEEEE
GEPGWDIIPDLYPIEGEPIIDKPGKGSFCATDLELILNQRGIENIVLTGITTDVCVHTTM
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHCCCCCCEEEEECCCHHHHHHHHH
REANDRGYECMMLEDCCGATDFGNHLAAIKMIKMQGGVFGAVSNSKALVAQLP
HHCCCCCEEEEEEHHHCCCCCCCCCEEEEEEEEECCCEEEEECCCCEEEEECC
>Mature Secondary Structure
MNARAEITQRYIDADPYPWPYNGELRPDNTALIIIDMQTDFCGPGGYVDHMGYDLSLVRA
CCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHCCCCCEEECC
PIEPIKSVLSAMRAKGYTVIHTREGHRPDLADLPANKRWRSRRINAGIGDPGPCGRILVR
CHHHHHHHHHHHHHCCEEEEEECCCCCCCHHCCCCCCCHHHHCCCCCCCCCCCCCEEEEE
GEPGWDIIPDLYPIEGEPIIDKPGKGSFCATDLELILNQRGIENIVLTGITTDVCVHTTM
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHCCCCCCEEEEECCCHHHHHHHHH
REANDRGYECMMLEDCCGATDFGNHLAAIKMIKMQGGVFGAVSNSKALVAQLP
HHCCCCCEEEEEEHHHCCCCCCCCCEEEEEEEEECCCEEEEECCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA