| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475882
Identifier: 13475882
GI number: 13475882
Start: 5823244
End: 5824356
Strand: Direct
Name: 13475882
Synonym: mlr7061
Alternate gene names: NA
Gene position: 5823244-5824356 (Clockwise)
Preceding gene: 13475879
Following gene: 13475883
Centisome position: 82.76
GC content: 63.61
Gene sequence:
>1113_bases ATGCTTAGCCGCCGCCAGTTGCTCAAGACCTCCGCCGCCGGGGCGGCATTCGGGCTTGCCTCCGCGGCCTTTCCCATCTC GCGGGCCTTTGCCGCCACCGCCACCGTCGGCTTCATCTATGTCGGCCCGAAGGACGACTACGGCTACAATCAGGCGCATG CAGAGGGGGCGGCGTCGCTGAAGGGCATCGAAGGCATCACCGTCGTCGAGGAGGAAAACGTTCCCGAGACGGTCGACGTC CAGAAGACCATGGAATCGATGATCAATCTCGACGGAGCCTCGCTTATCTTCCCGACCTCCTTCGGCTATTTCGATCCGCA CATGCTGGCCATGTGCGCGAAATTCCCCGACGTGCAGTTCCGCCATTGCGGCGGCATGTGGGACAAGGCCAAGCATCCGA TGAATGCCGGCTCCTATTTCGGCTATATCGGCATGGGCCAGTACCTAAACGGCGTCGTCGCCAGCCACACCTCGAAGAGC AAGAAGCTCGGTTTCGTCGCCGCCAAGCCCATTCCGCAGGTGCTGCTCAACATCAACTCCTTCCTGCTCGGCGCGCGTTC GGTCGATCCGGCCATCACCTGCCAGGTCATCTTCACCGGCGAATGGTCGCTGGCGGTGAAGGAAGCGGAAGCCACCAACG CGCTGGTCGACCAGGGCGCGGACGTCATCACCTGCCATGTCGACAGCCCGAAAGTGGTGGTCGAGACGGCTGCGGGCCGC GGCGCCTTCATCTGCGGCTACCACGCCAACCAGAGCCCGCTGGCGCCGGAAAAATACCTCACCGGGGCCGAGTGGAACTG GGCGAAGGTCTACAAGATGTTCGTCGATGACCTCGTCGCCGGCACGCCGCTGCCCAATTTCACCCGCGGCGGACTGGCTG ACGGTTTCGTCAAGATGAGCCCGCTCGGTCCCGCCGTCGGCGAGGCAGCCCGCAAGCAATTCGACGCCACGCTGGCCGAA ATGATGAAGGGCGGCTTCTCCGTCATCAAGGGCCCGCTAAAGAGCAACAAGGGCGCCGTCGTGGCGACGGAAGGCCAGGC CTTCGTTGAGACCGCCATTGAGCTCGAAAGCATGGACTATCTCGTCGAGGGCGTCGTCGGCTCGACCGCCTGA
Upstream 100 bases:
>100_bases CAATTCGAACTGGCACAGCGATTGCATGCACTTTCTTGAGAAGGCGTTAACCGACCCGGAAAGGGCCTACAGGGGAGCAT AAGAGATGACCGACCGATTC
Downstream 100 bases:
>100_bases TCTGAGGGGAGCGGGGCGATGACGGATACGGTGACAGGAGCCGGCGTGCCGGCACTATTCGGCGCCAAGGGCTATCCGGC GGCGCTGGAATGGATTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Bmp Family Protein; Basic Membrane Protein; Lipoprotein; Bmp Family Membrane Protein; ABC Transporter Periplasmic/Surface Lipoprotein; ABC Transporter; ABC Transporter Periplasmic Protein Surface Lipoprotein; Basic Membrane Lipoprotein Family; Twin-Arginine Translocation Pathway Signal; Outer Membrane Lipoprotein; Lipoprotein Periplasmic Protein; Tat Pathway Signal Sequence/Basic Membrane Protein; Basic Membrane Lipoprotein Family Protein; Surface Lipoprotein; Signal Peptide Protein; ABC Transporter Periplasmic Protein
Number of amino acids: Translated: 370; Mature: 370
Protein sequence:
>370_residues MLSRRQLLKTSAAGAAFGLASAAFPISRAFAATATVGFIYVGPKDDYGYNQAHAEGAASLKGIEGITVVEEENVPETVDV QKTMESMINLDGASLIFPTSFGYFDPHMLAMCAKFPDVQFRHCGGMWDKAKHPMNAGSYFGYIGMGQYLNGVVASHTSKS KKLGFVAAKPIPQVLLNINSFLLGARSVDPAITCQVIFTGEWSLAVKEAEATNALVDQGADVITCHVDSPKVVVETAAGR GAFICGYHANQSPLAPEKYLTGAEWNWAKVYKMFVDDLVAGTPLPNFTRGGLADGFVKMSPLGPAVGEAARKQFDATLAE MMKGGFSVIKGPLKSNKGAVVATEGQAFVETAIELESMDYLVEGVVGSTA
Sequences:
>Translated_370_residues MLSRRQLLKTSAAGAAFGLASAAFPISRAFAATATVGFIYVGPKDDYGYNQAHAEGAASLKGIEGITVVEEENVPETVDV QKTMESMINLDGASLIFPTSFGYFDPHMLAMCAKFPDVQFRHCGGMWDKAKHPMNAGSYFGYIGMGQYLNGVVASHTSKS KKLGFVAAKPIPQVLLNINSFLLGARSVDPAITCQVIFTGEWSLAVKEAEATNALVDQGADVITCHVDSPKVVVETAAGR GAFICGYHANQSPLAPEKYLTGAEWNWAKVYKMFVDDLVAGTPLPNFTRGGLADGFVKMSPLGPAVGEAARKQFDATLAE MMKGGFSVIKGPLKSNKGAVVATEGQAFVETAIELESMDYLVEGVVGSTA >Mature_370_residues MLSRRQLLKTSAAGAAFGLASAAFPISRAFAATATVGFIYVGPKDDYGYNQAHAEGAASLKGIEGITVVEEENVPETVDV QKTMESMINLDGASLIFPTSFGYFDPHMLAMCAKFPDVQFRHCGGMWDKAKHPMNAGSYFGYIGMGQYLNGVVASHTSKS KKLGFVAAKPIPQVLLNINSFLLGARSVDPAITCQVIFTGEWSLAVKEAEATNALVDQGADVITCHVDSPKVVVETAAGR GAFICGYHANQSPLAPEKYLTGAEWNWAKVYKMFVDDLVAGTPLPNFTRGGLADGFVKMSPLGPAVGEAARKQFDATLAE MMKGGFSVIKGPLKSNKGAVVATEGQAFVETAIELESMDYLVEGVVGSTA
Specific function: Unknown
COG id: COG1744
COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39202; Mature: 39202
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSRRQLLKTSAAGAAFGLASAAFPISRAFAATATVGFIYVGPKDDYGYNQAHAEGAASL CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCHHHHCCHHHC KGIEGITVVEEENVPETVDVQKTMESMINLDGASLIFPTSFGYFDPHMLAMCAKFPDVQF CCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCC RHCGGMWDKAKHPMNAGSYFGYIGMGQYLNGVVASHTSKSKKLGFVAAKPIPQVLLNINS HHCCCCHHHHCCCCCCCCEEEEECHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHH FLLGARSVDPAITCQVIFTGEWSLAVKEAEATNALVDQGADVITCHVDSPKVVVETAAGR HHEECCCCCCEEEEEEEEECCEEEEEEHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCC GAFICGYHANQSPLAPEKYLTGAEWNWAKVYKMFVDDLVAGTPLPNFTRGGLADGFVKMS CEEEEEECCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEC PLGPAVGEAARKQFDATLAEMMKGGFSVIKGPLKSNKGAVVATEGQAFVETAIELESMDY CCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHH LVEGVVGSTA HHHHHHCCCC >Mature Secondary Structure MLSRRQLLKTSAAGAAFGLASAAFPISRAFAATATVGFIYVGPKDDYGYNQAHAEGAASL CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCHHHHCCHHHC KGIEGITVVEEENVPETVDVQKTMESMINLDGASLIFPTSFGYFDPHMLAMCAKFPDVQF CCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCC RHCGGMWDKAKHPMNAGSYFGYIGMGQYLNGVVASHTSKSKKLGFVAAKPIPQVLLNINS HHCCCCHHHHCCCCCCCCEEEEECHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHH FLLGARSVDPAITCQVIFTGEWSLAVKEAEATNALVDQGADVITCHVDSPKVVVETAAGR HHEECCCCCCEEEEEEEEECCEEEEEEHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCC GAFICGYHANQSPLAPEKYLTGAEWNWAKVYKMFVDDLVAGTPLPNFTRGGLADGFVKMS CEEEEEECCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEC PLGPAVGEAARKQFDATLAEMMKGGFSVIKGPLKSNKGAVVATEGQAFVETAIELESMDY CCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHH LVEGVVGSTA HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA