| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475880
Identifier: 13475880
GI number: 13475880
Start: 5821250
End: 5821900
Strand: Reverse
Name: 13475880
Synonym: mll7059
Alternate gene names: NA
Gene position: 5821900-5821250 (Counterclockwise)
Preceding gene: 13475881
Following gene: 13475875
Centisome position: 82.74
GC content: 62.67
Gene sequence:
>651_bases ATGGTTGGCGCATCGACCGTTACGGAAAAAGACCTGTCGCTCGGTAGGCCCGGATCGTCCAACATGTCGCAGATCTCTGC GCGCGAGGACTCCAAGAGTCATGCGGCGCGCGATCACTGGATCGCCGAGCGGATCTTCGACTGGTTGGGCGTTCCCACCA TCCATCTGCGGCTGACCTTCTTCTCGCAATGGCTGCTCTACCCGTTTGCACGCAAGACGATCGTCGAACAGAGCGTCATC GACTTGCCCTATGGCGCTGGCCGTCATGCTCCCATCGCTGCCGAGGACCAGGCCCGCCTGATCGCAGCGCTGCTGGCCGA TCCGGCCGCCCATGTCGGCAAGACCTACACGCTTCATGGGCCGACCGAGCTTGATCAGCCGGGCATCGCCTCAGCCCTCA GCGAGGTGCTCGGCCGCAAGATCGGCTATCAGCCGCTGACCATCCCCGCCTATCGCGATCGCCTGGAAAAGTTCGGCCTG CCGGAATTTTTGATCCAGCATTTCTGTGCGATCGCCCTCGATTACCAGAACGGCATCTTCTCGGGCGCCGACAAGATCAT CGCCGAAGTGACGCGCGCGCCGCCGATGACCGTTCAGGACTTCGTCACGTCGCACCGGGCCGCCTTCAATACGCTGGACG CGGCGGCATAA
Upstream 100 bases:
>100_bases AAAACCAATGGTCATGGCAGATCCGGAGAACGCATTAAGGTTGTTGATTTTATTGGGTTTTTCGCGGACCAAAATCAGAA ATCTTCCCGTATCGTTCCGC
Downstream 100 bases:
>100_bases GCCACTCCGGCGTCGCCCGACGGAACATCGGAACACTGGGTCGGAAGCACCTCTAAAGCGTTGATAAATAACGACAATGG TGGGTCCGGAGGGTTGGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: Hydroxylase; Nucleoside-Diphosphate Sugar Epimerase; NmrA-Like
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MVGASTVTEKDLSLGRPGSSNMSQISAREDSKSHAARDHWIAERIFDWLGVPTIHLRLTFFSQWLLYPFARKTIVEQSVI DLPYGAGRHAPIAAEDQARLIAALLADPAAHVGKTYTLHGPTELDQPGIASALSEVLGRKIGYQPLTIPAYRDRLEKFGL PEFLIQHFCAIALDYQNGIFSGADKIIAEVTRAPPMTVQDFVTSHRAAFNTLDAAA
Sequences:
>Translated_216_residues MVGASTVTEKDLSLGRPGSSNMSQISAREDSKSHAARDHWIAERIFDWLGVPTIHLRLTFFSQWLLYPFARKTIVEQSVI DLPYGAGRHAPIAAEDQARLIAALLADPAAHVGKTYTLHGPTELDQPGIASALSEVLGRKIGYQPLTIPAYRDRLEKFGL PEFLIQHFCAIALDYQNGIFSGADKIIAEVTRAPPMTVQDFVTSHRAAFNTLDAAA >Mature_216_residues MVGASTVTEKDLSLGRPGSSNMSQISAREDSKSHAARDHWIAERIFDWLGVPTIHLRLTFFSQWLLYPFARKTIVEQSVI DLPYGAGRHAPIAAEDQARLIAALLADPAAHVGKTYTLHGPTELDQPGIASALSEVLGRKIGYQPLTIPAYRDRLEKFGL PEFLIQHFCAIALDYQNGIFSGADKIIAEVTRAPPMTVQDFVTSHRAAFNTLDAAA
Specific function: Unknown
COG id: COG0702
COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23666; Mature: 23666
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGASTVTEKDLSLGRPGSSNMSQISAREDSKSHAARDHWIAERIFDWLGVPTIHLRLTF CCCCCCCCHHHHCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCEEHHHH FSQWLLYPFARKTIVEQSVIDLPYGAGRHAPIAAEDQARLIAALLADPAAHVGKTYTLHG HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHCCEEEECC PTELDQPGIASALSEVLGRKIGYQPLTIPAYRDRLEKFGLPEFLIQHFCAIALDYQNGIF CCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCH SGADKIIAEVTRAPPMTVQDFVTSHRAAFNTLDAAA HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVGASTVTEKDLSLGRPGSSNMSQISAREDSKSHAARDHWIAERIFDWLGVPTIHLRLTF CCCCCCCCHHHHCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCEEHHHH FSQWLLYPFARKTIVEQSVIDLPYGAGRHAPIAAEDQARLIAALLADPAAHVGKTYTLHG HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHCCEEEECC PTELDQPGIASALSEVLGRKIGYQPLTIPAYRDRLEKFGLPEFLIQHFCAIALDYQNGIF CCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCH SGADKIIAEVTRAPPMTVQDFVTSHRAAFNTLDAAA HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA