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The map label for this gene is yurM [H]

Identifier: 13475832

GI number: 13475832

Start: 5765699

End: 5766565

Strand: Direct

Name: yurM [H]

Synonym: mlr7002

Alternate gene names: 13475832

Gene position: 5765699-5766565 (Clockwise)

Preceding gene: 13475831

Following gene: 13475833

Centisome position: 81.94

GC content: 61.59

Gene sequence:

>867_bases
ATGAGCGGCGTGGCCAGCCCCTTTCGCCAGGCCGGCGCGGAGCGGGTGGATCCGCTGCTGGTGGCATTGTGGATCGCGCT
GATCATCGTCGCCGTGGTCTGGATCGCTCCGTTCATCTTCATCATCTTCACGTCGCTGAAATCGAACGCCACGGTGATGG
GGACCGGCGCATTCTCGCCGCCCACCAGCCTCGCCTGGGAGAATTTCACCAATGCCTGGCGGCGCGGCGATTTCGGCACA
ACGGTCGTCAACAGCACCATCATCACCATCATCAAGGTGCCGCTCGGGCTGATGATATCGGCCATGGCCGCCTATTCGCT
GAGCCGCATCCAGATCTGGGGACACAAGGTGGTCTTCCTTGCCATCGTGTTTGGCACGATGATCCCGTTCCAGGTGATGC
TGGCGCCGATCTTCAAGCAGGTGAACAGCTTCGGGCTGATCAACACCTATGTCGGCATCATCCTGCCCTATCTCGCCTTC
GGCGTCCCTTACCAGGTCTTCATCCTGCATGGCTTCTTCAAGGAAGTGCCTAAGGAGCTCAGCGAGGCGGCGCTTATCGA
CGGTGCGTCGCATTTCACCGTGTTCCGGCGCATTTTCCTGCCGGTGTCGCTGCCGGTGCTTGCGGCGCTGCTGATCCTCG
ACTTCGTCGCCACCTGGAACGAGTTCGCCATGGCGCTGGTCATCTTGCAGGATCCGGACCGCTGGACGTTGCCGCTCGGC
CTGATGTCGTTCCAGAGCCAGTTCGCCCGCGACTACGGCCAACTCAACGCGGCGATCGTCATGACGGTGCTGCCGGCGGC
GATCGTCTACCTCATCTTCCAGCGCTACTTCGTCTCGGGGCTGACTTCAGGCGCGGTCAAGGAATAG

Upstream 100 bases:

>100_bases
TCGGCCGTGGCAGCGCCATCTCCGTCGTGCTCTTGCTCATCACCGTTGCCATCGTCATCCCCTATTTGCGCTGGACGCTC
AAGCGGCAGGAGGCCTATCA

Downstream 100 bases:

>100_bases
CAACGCAAGGAACCACGCATGGCCGACGGCACGACAGTCGAGAAATGGGACATATTCGAGATCGCACTGAAGGGGCCCGC
GGACGGCAATCCCTTCGTCG

Product: ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 287

Protein sequence:

>288_residues
MSGVASPFRQAGAERVDPLLVALWIALIIVAVVWIAPFIFIIFTSLKSNATVMGTGAFSPPTSLAWENFTNAWRRGDFGT
TVVNSTIITIIKVPLGLMISAMAAYSLSRIQIWGHKVVFLAIVFGTMIPFQVMLAPIFKQVNSFGLINTYVGIILPYLAF
GVPYQVFILHGFFKEVPKELSEAALIDGASHFTVFRRIFLPVSLPVLAALLILDFVATWNEFAMALVILQDPDRWTLPLG
LMSFQSQFARDYGQLNAAIVMTVLPAAIVYLIFQRYFVSGLTSGAVKE

Sequences:

>Translated_288_residues
MSGVASPFRQAGAERVDPLLVALWIALIIVAVVWIAPFIFIIFTSLKSNATVMGTGAFSPPTSLAWENFTNAWRRGDFGT
TVVNSTIITIIKVPLGLMISAMAAYSLSRIQIWGHKVVFLAIVFGTMIPFQVMLAPIFKQVNSFGLINTYVGIILPYLAF
GVPYQVFILHGFFKEVPKELSEAALIDGASHFTVFRRIFLPVSLPVLAALLILDFVATWNEFAMALVILQDPDRWTLPLG
LMSFQSQFARDYGQLNAAIVMTVLPAAIVYLIFQRYFVSGLTSGAVKE
>Mature_287_residues
SGVASPFRQAGAERVDPLLVALWIALIIVAVVWIAPFIFIIFTSLKSNATVMGTGAFSPPTSLAWENFTNAWRRGDFGTT
VVNSTIITIIKVPLGLMISAMAAYSLSRIQIWGHKVVFLAIVFGTMIPFQVMLAPIFKQVNSFGLINTYVGIILPYLAFG
VPYQVFILHGFFKEVPKELSEAALIDGASHFTVFRRIFLPVSLPVLAALLILDFVATWNEFAMALVILQDPDRWTLPLGL
MSFQSQFARDYGQLNAAIVMTVLPAAIVYLIFQRYFVSGLTSGAVKE

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1790464, Length=195, Percent_Identity=32.8205128205128, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI1787571, Length=186, Percent_Identity=30.1075268817204, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1789860, Length=264, Percent_Identity=27.2727272727273, Blast_Score=93, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31732; Mature: 31601

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGVASPFRQAGAERVDPLLVALWIALIIVAVVWIAPFIFIIFTSLKSNATVMGTGAFSP
CCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCC
PTSLAWENFTNAWRRGDFGTTVVNSTIITIIKVPLGLMISAMAAYSLSRIQIWGHKVVFL
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIVFGTMIPFQVMLAPIFKQVNSFGLINTYVGIILPYLAFGVPYQVFILHGFFKEVPKEL
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
SEAALIDGASHFTVFRRIFLPVSLPVLAALLILDFVATWNEFAMALVILQDPDRWTLPLG
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHH
LMSFQSQFARDYGQLNAAIVMTVLPAAIVYLIFQRYFVSGLTSGAVKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SGVASPFRQAGAERVDPLLVALWIALIIVAVVWIAPFIFIIFTSLKSNATVMGTGAFSP
CCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCC
PTSLAWENFTNAWRRGDFGTTVVNSTIITIIKVPLGLMISAMAAYSLSRIQIWGHKVVFL
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIVFGTMIPFQVMLAPIFKQVNSFGLINTYVGIILPYLAFGVPYQVFILHGFFKEVPKEL
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
SEAALIDGASHFTVFRRIFLPVSLPVLAALLILDFVATWNEFAMALVILQDPDRWTLPLG
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHH
LMSFQSQFARDYGQLNAAIVMTVLPAAIVYLIFQRYFVSGLTSGAVKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]